Literature DB >> 30009283

Medical Image Synthesis with Context-Aware Generative Adversarial Networks.

Dong Nie1,2, Roger Trullo1,3, Jun Lian4, Caroline Petitjean3, Su Ruan3, Qian Wang5, Dinggang Shen1.   

Abstract

Computed tomography (CT) is critical for various clinical applications, e.g., radiation treatment planning and also PET attenuation correction in MRI/PET scanner. However, CT exposes radiation during acquisition, which may cause side effects to patients. Compared to CT, magnetic resonance imaging (MRI) is much safer and does not involve radiations. Therefore, recently researchers are greatly motivated to estimate CT image from its corresponding MR image of the same subject for the case of radiation planning. In this paper, we propose a data-driven approach to address this challenging problem. Specifically, we train a fully convolutional network (FCN) to generate CT given the MR image. To better model the nonlinear mapping from MRI to CT and produce more realistic images, we propose to use the adversarial training strategy to train the FCN. Moreover, we propose an image-gradient-difference based loss function to alleviate the blurriness of the generated CT. We further apply Auto-Context Model (ACM) to implement a context-aware generative adversarial network. Experimental results show that our method is accurate and robust for predicting CT images from MR images, and also outperforms three state-of-the-art methods under comparison.

Entities:  

Keywords:  Auto-context; Deep learning; GAN; Generative models; Image synthesis

Year:  2017        PMID: 30009283      PMCID: PMC6044459          DOI: 10.1007/978-3-319-66179-7_48

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  10 in total

1.  MRI-based attenuation correction for hybrid PET/MRI systems: a 4-class tissue segmentation technique using a combined ultrashort-echo-time/Dixon MRI sequence.

Authors:  Yannick Berker; Jochen Franke; André Salomon; Moritz Palmowski; Henk C W Donker; Yavuz Temur; Felix M Mottaghy; Christiane Kuhl; David Izquierdo-Garcia; Zahi A Fayad; Fabian Kiessling; Volkmar Schulz
Journal:  J Nucl Med       Date:  2012-04-13       Impact factor: 10.057

2.  Auto-context and its application to high-level vision tasks and 3D brain image segmentation.

Authors:  Zhuowen Tu; Xiang Bai
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2010-10       Impact factor: 6.226

3.  Diffeomorphic demons: efficient non-parametric image registration.

Authors:  Tom Vercauteren; Xavier Pennec; Aymeric Perchant; Nicholas Ayache
Journal:  Neuroimage       Date:  2008-11-07       Impact factor: 6.556

4.  Attenuation correction for a combined 3D PET/CT scanner.

Authors:  P E Kinahan; D W Townsend; T Beyer; D Sashin
Journal:  Med Phys       Date:  1998-10       Impact factor: 4.071

5.  Image Super-Resolution Using Deep Convolutional Networks.

Authors:  Chao Dong; Chen Change Loy; Kaiming He; Xiaoou Tang
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2016-02       Impact factor: 6.226

6.  IMPROVING MAGNETIC RESONANCE RESOLUTION WITH SUPERVISED LEARNING.

Authors:  Amod Jog; Aaron Carass; Jerry L Prince
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2014

7.  Toward implementing an MRI-based PET attenuation-correction method for neurologic studies on the MR-PET brain prototype.

Authors:  Ciprian Catana; Andre van der Kouwe; Thomas Benner; Christian J Michel; Michael Hamm; Matthias Fenchel; Bruce Fischl; Bruce Rosen; Matthias Schmand; A Gregory Sorensen
Journal:  J Nucl Med       Date:  2010-09       Impact factor: 10.057

8.  Deep learning based imaging data completion for improved brain disease diagnosis.

Authors:  Rongjian Li; Wenlu Zhang; Heung-Il Suk; Li Wang; Jiang Li; Dinggang Shen; Shuiwang Ji
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

9.  FULLY CONVOLUTIONAL NETWORKS FOR MULTI-MODALITY ISOINTENSE INFANT BRAIN IMAGE SEGMENTATION.

Authors:  Dong Nie; Li Wang; Yaozong Gao; Dinggang Shen
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2016

10.  Estimating CT Image From MRI Data Using Structured Random Forest and Auto-Context Model.

Authors:  Tri Huynh; Yaozong Gao; Jiayin Kang; Li Wang; Pei Zhang; Jun Lian; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2015-07-28       Impact factor: 10.048

  10 in total
  75 in total

1.  3D Auto-Context-Based Locality Adaptive Multi-Modality GANs for PET Synthesis.

Authors:  Yan Wang; Luping Zhou; Biting Yu; Lei Wang; Chen Zu; David S Lalush; Weili Lin; Xi Wu; Jiliu Zhou; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2018-11-29       Impact factor: 10.048

2.  Deep Leaning Based Multi-Modal Fusion for Fast MR Reconstruction.

Authors:  Lei Xiang; Yong Chen; Weitang Chang; Yiqiang Zhan; Weili Lin; Qian Wang; Dinggang Shen
Journal:  IEEE Trans Biomed Eng       Date:  2018-11-29       Impact factor: 4.538

3.  Novel adversarial semantic structure deep learning for MRI-guided attenuation correction in brain PET/MRI.

Authors:  Hossein Arabi; Guodong Zeng; Guoyan Zheng; Habib Zaidi
Journal:  Eur J Nucl Med Mol Imaging       Date:  2019-07-01       Impact factor: 9.236

4.  Unpaired Deep Cross-Modality Synthesis with Fast Training.

Authors:  Lei Xiang; Yang Li; Weili Lin; Qian Wang; Dinggang Shen
Journal:  Deep Learn Med Image Anal Multimodal Learn Clin Decis Support (2018)       Date:  2018-09-20

5.  Generative modeling for renal microanatomy.

Authors:  Leema Krishna Murali; Brendon Lutnick; Brandon Ginley; John E Tomaszewski; Pinaki Sarder
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2020-03-16

6.  Deep Learning for Fast and Spatially Constrained Tissue Quantification From Highly Accelerated Data in Magnetic Resonance Fingerprinting.

Authors:  Zhenghan Fang; Yong Chen; Mingxia Liu; Lei Xiang; Qian Zhang; Qian Wang; Weili Lin; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2019-02-13       Impact factor: 10.048

7.  Integrating cross-modality hallucinated MRI with CT to aid mediastinal lung tumor segmentation.

Authors:  Jiang Jue; Hu Jason; Tyagi Neelam; Rimner Andreas; Berry L Sean; Deasy O Joseph; Veeraraghavan Harini
Journal:  Med Image Comput Comput Assist Interv       Date:  2019-10-10

Review 8.  Applications of artificial intelligence in nuclear medicine image generation.

Authors:  Zhibiao Cheng; Junhai Wen; Gang Huang; Jianhua Yan
Journal:  Quant Imaging Med Surg       Date:  2021-06

9.  Adversarial Confidence Learning for Medical Image Segmentation and Synthesis.

Authors:  Dong Nie; Dinggang Shen
Journal:  Int J Comput Vis       Date:  2020-03-21       Impact factor: 7.410

10.  Attention-Guided Generative Adversarial Network to Address Atypical Anatomy in Synthetic CT Generation.

Authors:  Hajar Emami; Ming Dong; Carri K Glide-Hurst
Journal:  2020 IEEE 21st Int Conf Inf Reuse Integr Data Sci (2020)       Date:  2020-09-10
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