Literature DB >> 20724753

Auto-context and its application to high-level vision tasks and 3D brain image segmentation.

Zhuowen Tu1, Xiang Bai.   

Abstract

The notion of using context information for solving high-level vision and medical image segmentation problems has been increasingly realized in the field. However, how to learn an effective and efficient context model, together with an image appearance model, remains mostly unknown. The current literature using Markov Random Fields (MRFs) and Conditional Random Fields (CRFs) often involves specific algorithm design in which the modeling and computing stages are studied in isolation. In this paper, we propose a learning algorithm, auto-context. Given a set of training images and their corresponding label maps, we first learn a classifier on local image patches. The discriminative probability (or classification confidence) maps created by the learned classifier are then used as context information, in addition to the original image patches, to train a new classifier. The algorithm then iterates until convergence. Auto-context integrates low-level and context information by fusing a large number of low-level appearance features with context and implicit shape information. The resulting discriminative algorithm is general and easy to implement. Under nearly the same parameter settings in training, we apply the algorithm to three challenging vision applications: foreground/background segregation, human body configuration estimation, and scene region labeling. Moreover, context also plays a very important role in medical/brain images where the anatomical structures are mostly constrained to relatively fixed positions. With only some slight changes resulting from using 3D instead of 2D features, the auto-context algorithm applied to brain MRI image segmentation is shown to outperform state-of-the-art algorithms specifically designed for this domain. Furthermore, the scope of the proposed algorithm goes beyond image analysis and it has the potential to be used for a wide variety of problems for structured prediction problems.

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Year:  2010        PMID: 20724753     DOI: 10.1109/TPAMI.2009.186

Source DB:  PubMed          Journal:  IEEE Trans Pattern Anal Mach Intell        ISSN: 0098-5589            Impact factor:   6.226


  101 in total

1.  Joint Labeling Of Multiple Regions of Interest (Rois) By Enhanced Auto Context Models.

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2.  Automated segmentation of dental CBCT image with prior-guided sequential random forests.

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Journal:  Med Phys       Date:  2016-01       Impact factor: 4.071

3.  Accurate Segmentation of CT Male Pelvic Organs via Regression-Based Deformable Models and Multi-Task Random Forests.

Authors:  Yaozong Gao; Yeqin Shao; Jun Lian; Andrew Z Wang; Ronald C Chen; Dinggang Shen
Journal:  IEEE Trans Med Imaging       Date:  2016-01-18       Impact factor: 10.048

4.  Nonlocal atlas-guided multi-channel forest learning for human brain labeling.

Authors:  Guangkai Ma; Yaozong Gao; Guorong Wu; Ligang Wu; Dinggang Shen
Journal:  Med Phys       Date:  2016-02       Impact factor: 4.071

5.  Learning image context for segmentation of prostate in CT-guided radiotherapy.

Authors:  Wei Li; Shu Liao; Qianjin Feng; Wufan Chen; Dinggang Shen
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

6.  Soft-Split Random Forest for Anatomy Labeling.

Authors:  Guangkai Ma; Yaozong Gao; Li Wang; Ligang Wu; Dinggang Shen
Journal:  Mach Learn Med Imaging       Date:  2015-10-02

7.  Feasibility Study of a Generalized Framework for Developing Computer-Aided Detection Systems-a New Paradigm.

Authors:  Mitsutaka Nemoto; Naoto Hayashi; Shouhei Hanaoka; Yukihiro Nomura; Soichiro Miki; Takeharu Yoshikawa
Journal:  J Digit Imaging       Date:  2017-10       Impact factor: 4.056

8.  Learning-based structurally-guided construction of resting-state functional correlation tensors.

Authors:  Lichi Zhang; Han Zhang; Xiaobo Chen; Qian Wang; Pew-Thian Yap; Dinggang Shen
Journal:  Magn Reson Imaging       Date:  2017-07-17       Impact factor: 2.546

9.  Deep Auto-context Convolutional Neural Networks for Standard-Dose PET Image Estimation from Low-Dose PET/MRI.

Authors:  Lei Xiang; Yu Qiao; Dong Nie; Le An; Qian Wang; Dinggang Shen
Journal:  Neurocomputing       Date:  2017-06-29       Impact factor: 5.719

10.  Liver tissue classification in patients with hepatocellular carcinoma by fusing structured and rotationally invariant context representation.

Authors:  John Treilhard; Susanne Smolka; Lawrence Staib; Julius Chapiro; MingDe Lin; Georgy Shakirin; James Duncan
Journal:  Med Image Comput Comput Assist Interv       Date:  2017-09-04
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