Literature DB >> 2997750

The genomic organisation and nucleotide sequence of the HLA-SB(DP) alpha gene.

S K Lawrance, H K Das, J Pan, S M Weissman.   

Abstract

We have isolated a unique fragment of the HLA-DR alpha gene and probed human genomic DNA at low stringency to search for homologous sequences. A minimum of six non-polymorphic cross-hybridizing high molecular weight fragments were found in all DNAs examined. In order to obtain molecular clones of these cross-hybridizing fragments, we constructed lambda and cosmid libraries of human DNA and screened them at low stringency with the HLA-DR alpha gene specific subclone. We have isolated clones corresponding to each of the six fragments and, in this paper, describe those which contain the gene encoding HLA-SB(DP) alpha.

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Year:  1985        PMID： 2997750      PMCID： PMC322059          DOI： 10.1093/nar/13.20.7515

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  31 in total

1.  In vitro packaging of lambda and cosmid DNA.

Authors:  B Hohn
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

2.  A general method for isolation of high molecular weight DNA from eukaryotes.

Authors:  N Blin; D W Stafford
Journal:  Nucleic Acids Res       Date:  1976-09       Impact factor: 16.971

3.  EK2 derivatives of bacteriophage lambda useful in the cloning of DNA from higher organisms: the lambdagtWES system.

Authors:  P Leder; D Tiemeier; L Enquist
Journal:  Science       Date:  1977-04-08       Impact factor: 47.728

4.  DNA sequence and characterization of human class II major histocompatibility complex beta chains from the DR1 haplotype.

Authors:  J I Bell; P Estess; T St John; R Saiki; D L Watling; H A Erlich; H O McDevitt
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

5.  Construction of coliphage lambda Charon vectors with BamHI cloning sites.

Authors:  D L Rimm; D Horness; J Kucera; F R Blattner
Journal:  Gene       Date:  1980-12       Impact factor: 3.688

6.  The isolation of structural genes from libraries of eucaryotic DNA.

Authors:  T Maniatis; R C Hardison; E Lacy; J Lauer; C O'Connell; D Quon; G K Sim; A Efstratiadis
Journal:  Cell       Date:  1978-10       Impact factor: 41.582

7.  Complete nucleotide sequence of a functional HLA-DP beta gene and the region between the DP beta 1 and DP alpha 1 genes: comparison of the 5' ends of HLA class II genes.

Authors:  A Kelly; J Trowsdale
Journal:  Nucleic Acids Res       Date:  1985-03-11       Impact factor: 16.971

8.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

9.  SB subregion of the human major histocompatibility complex: gene organization, allelic polymorphism and expression in transformed cells.

Authors:  K Okada; H L Prentice; J M Boss; D J Levy; D Kappes; T Spies; R Raghupathy; R A Mengler; C Auffray; J L Strominger
Journal:  EMBO J       Date:  1985-03       Impact factor: 11.598

10.  Evidence for a new segregant series of B cell antigens that are encoded in the HLA-D region and that stimulate secondary allogenic proliferative and cytotoxic responses.

Authors:  S Shaw; A H Johnson; G M Shearer
Journal:  J Exp Med       Date:  1980-09-01       Impact factor: 14.307
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  13 in total

1.  Prototypic sequences for human repetitive DNA.

Authors:  J Jurka; J Walichiewicz; A Milosavljevic
Journal:  J Mol Evol       Date:  1992-10       Impact factor: 2.395

2.  Purification of BsuE methyltransferase and its application in genome mapping.

Authors:  H Shukla; Y Kobayashi; H Arenstorf; Y Yasukochi; S M Weissman
Journal:  Nucleic Acids Res       Date:  1991-08-11       Impact factor: 16.971

3.  Medium reiteration frequency repetitive sequences in the human genome.

Authors:  D J Kaplan; J Jurka; J F Solus; C H Duncan
Journal:  Nucleic Acids Res       Date:  1991-09-11       Impact factor: 16.971

4.  Structure, expression, and molecular mapping of a divergent member of the class I HLA gene family.

Authors:  R Srivastava; M J Chorney; S K Lawrance; J Pan; Z Smith; C L Smith; S M Weissman
Journal:  Proc Natl Acad Sci U S A       Date:  1987-06       Impact factor: 11.205

5.  Characterization of an HLA-DR beta pseudogene in the DRw52 supertypic group.

Authors:  P Rollini; B Mach; J Gorski
Journal:  Immunogenetics       Date:  1987       Impact factor: 2.846

6.  The 5' splice site: phylogenetic evolution and variable geometry of association with U1RNA.

Authors:  M Jacob; H Gallinaro
Journal:  Nucleic Acids Res       Date:  1989-03-25       Impact factor: 16.971

7.  Exon-specific oligonucleotide probes localize HLA-DQ beta allelic polymorphisms.

Authors:  S L Holbeck; G T Nepom
Journal:  Immunogenetics       Date:  1986       Impact factor: 2.846

8.  Zebrafish Mhc class II alpha chain-encoding genes: polymorphism, expression, and function.

Authors:  H Sültmann; W E Mayer; F Figueroa; C O'hUigin; J Klein
Journal:  Immunogenetics       Date:  1993       Impact factor: 2.846

9.  Transcription analysis, physical mapping, and molecular characterization of a nonclassical human leukocyte antigen class I gene.

Authors:  M J Chorney; I Sawada; G A Gillespie; R Srivastava; J Pan; S M Weissman
Journal:  Mol Cell Biol       Date:  1990-01       Impact factor: 4.272

10.  The nucleotide sequence of the bovine MHC class II alpha genes: DRA, DOA, and DYA.

Authors:  J J van der Poel; M A Groenen; R J Dijkhof; D Ruyter; M J Giphart
Journal:  Immunogenetics       Date:  1990       Impact factor: 2.846
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