Literature DB >> 29316387

Solid-Phase Synthesis of β-Amino Ketones Via DNA-Compatible Organocatalytic Mannich Reactions.

Nam Tran-Hoang1, Thomas Kodadek1.   

Abstract

One-bead-one-compound (OBOC) libraries constructed by solid-phase split-and-pool synthesis are a valuable source of protein ligands. Most OBOC libraries are comprised of oligoamides, particularly peptides, peptoids, and peptoid-inspired molecules. Further diversification of the chemical space covered by OBOC libraries is desirable. Toward this end, we report here the efficient proline-catalyzed asymmetric Mannich reaction between immobilized aldehydes and soluble ketones and anilines. The reaction conditions do not compromise the amplification of DNA by the PCR. Thus, this chemistry will likely be useful for the construction of novel DNA-encoded libraries by solid-phase synthesis.

Entities:  

Keywords:  DNA-encoded libraries; Mannich reaction; one-bead-one-compound libraries; organocatalysis; solid-phase synthesis

Mesh:

Substances:

Year:  2018        PMID: 29316387      PMCID: PMC7074847          DOI: 10.1021/acscombsci.7b00151

Source DB:  PubMed          Journal:  ACS Comb Sci        ISSN: 2156-8944            Impact factor:   3.784


  45 in total

1.  Mixture-based combinatorial libraries: from peptides and peptidomimetics to small molecule acyclic and heterocyclic compounds.

Authors:  Cornelia E Hoesl; Adel Nefzi; John M Ostresh; Yongping Yu; Richard A Houghten
Journal:  Methods Enzymol       Date:  2003       Impact factor: 1.600

2.  Quantum dots as a visual aid for screening bead-bound combinatorial libraries.

Authors:  Hernando J Olivos; Kiran Bachhawat-Sikder; Thomas Kodadek
Journal:  Chembiochem       Date:  2003-11-07       Impact factor: 3.164

3.  Cleavable hydrophilic linker for one-bead-one-compound sequencing of oligomer libraries by tandem mass spectrometry.

Authors:  Margot G Paulick; Kathryn M Hart; Kristin M Brinner; Meiliana Tjandra; Deborah H Charych; Ronald N Zuckermann
Journal:  J Comb Chem       Date:  2006 May-Jun

4.  The proline-catalyzed direct asymmetric three-component Mannich reaction: scope, optimization, and application to the highly enantioselective synthesis of 1,2-amino alcohols.

Authors:  Benjamin List; Peter Pojarliev; William T Biller; Harry J Martin
Journal:  J Am Chem Soc       Date:  2002-02-06       Impact factor: 15.419

Review 5.  Design, synthesis, and application of OB2C combinatorial peptide and peptidomimetic libraries.

Authors:  Ruiwu Liu; Tsung-Chieh Shih; Xiaojun Deng; Lara Anwar; Sara Ahadi; Pappanaicken Kumaresan; Kit S Lam
Journal:  Methods Mol Biol       Date:  2015

6.  Incorporation of heterocycles into the backbone of peptoids to generate diverse peptoid-inspired one bead one compound libraries.

Authors:  Animesh Aditya; Thomas Kodadek
Journal:  ACS Comb Sci       Date:  2012-02-21       Impact factor: 3.784

7.  Solid-phase synthesis of peptoid-like oligomers containing diverse diketopiperazine units.

Authors:  Sujit Suwal; Thomas Kodadek
Journal:  Org Biomol Chem       Date:  2014-08-21       Impact factor: 3.876

8.  High-throughput sequencing of peptoids and peptide-peptoid hybrids by partial edman degradation and mass spectrometry.

Authors:  Amit Thakkar; Allison S Cohen; Michael D Connolly; Ronald N Zuckermann; Dehua Pei
Journal:  J Comb Chem       Date:  2009-03-09

9.  Rapid Discovery of Functional Small Molecule Ligands against Proteomic Targets through Library-Against-Library Screening.

Authors:  Chun-Yi Wu; Don-Hong Wang; Xiaobing Wang; Seth M Dixon; Liping Meng; Sara Ahadi; Daniel H Enter; Chao-Yu Chen; Jason Kato; Leonardo J Leon; Laura M Ramirez; Yoshiko Maeda; Carolina F Reis; Brianna Ribeiro; Brittany Weems; Hsing-Jien Kung; Kit S Lam
Journal:  ACS Comb Sci       Date:  2016-05-03       Impact factor: 3.784

10.  Utility of redundant combinatorial libraries in distinguishing high and low quality screening hits.

Authors:  Todd M Doran; Yu Gao; Kimberly Mendes; Sonja Dean; Scott Simanski; Thomas Kodadek
Journal:  ACS Comb Sci       Date:  2014-04-21       Impact factor: 3.784

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  4 in total

Review 1.  Chemical composition of DNA-encoded libraries, past present and future.

Authors:  Paige Dickson; Thomas Kodadek
Journal:  Org Biomol Chem       Date:  2019-05-15       Impact factor: 3.876

2.  Solid-phase synthesis of DNA-encoded libraries via an "aldehyde explosion" strategy.

Authors:  Nicholas G Paciaroni; John M Ndungu; Thomas Kodadek
Journal:  Chem Commun (Camb)       Date:  2020-03-26       Impact factor: 6.222

Review 3.  DNA-Encoded Chemistry: Drug Discovery from a Few Good Reactions.

Authors:  Patrick R Fitzgerald; Brian M Paegel
Journal:  Chem Rev       Date:  2020-10-12       Impact factor: 72.087

Review 4.  DNA-encoded libraries (DELs): a review of on-DNA chemistries and their output.

Authors:  Ying Shi; Yan-Ran Wu; Jian-Qiang Yu; Wan-Nian Zhang; Chun-Lin Zhuang
Journal:  RSC Adv       Date:  2021-01-19       Impact factor: 3.361

  4 in total

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