Literature DB >> 29296497

Correlative three-dimensional fluorescence and refractive index tomography: bridging the gap between molecular specificity and quantitative bioimaging.

Kyoohyun Kim1,2,3, Wei Sun Park4, Sangchan Na5, Sangbum Kim5, Taehong Kim5, Won Do Heo4,6, YongKeun Park1,2,5.   

Abstract

Optical diffraction tomography (ODT) provides label-free three-dimensional (3D) refractive index (RI) measurement of biological samples. However, due to the nature of the RI values of biological specimens, ODT has limited access to molecular specific information. Here, we present an optical setup combining ODT with three-channel 3D fluorescence microscopy, to enhance the molecular specificity of the 3D RI measurement. The 3D RI distribution and 3D deconvoluted fluorescence images of HeLa cells and NIH-3T3 cells are measured, and the cross-correlative analysis between RI and fluorescence of live cells are presented.

Keywords:  (180.2520) Fluorescence microscopy; (180.3170) Interference microscopy; (180.6900) Three-dimensional microscopy

Year:  2017        PMID： 29296497      PMCID： PMC5745112          DOI： 10.1364/BOE.8.005688

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN： 2156-7085            Impact factor:   3.732


  42 in total

1.  Tomographic phase microscopy.

Authors:  Wonshik Choi; Christopher Fang-Yen; Kamran Badizadegan; Seungeun Oh; Niyom Lue; Ramachandra R Dasari; Michael S Feld
Journal:  Nat Methods       Date:  2007-08-12       Impact factor: 28.547

2.  Synthetic aperture tomographic phase microscopy for 3D imaging of live cells in translational motion.

Authors:  Niyom Lue; Wonshik Choi; Gabriel Popescu; Kamran Badizadegan; Ramachandra R Dasari; Michael S Feld
Journal:  Opt Express       Date:  2008-09-29       Impact factor: 3.894

3.  Tomographic phase microscopy with 180° rotation of live cells in suspension by holographic optical tweezers.

Authors:  Mor Habaza; Barak Gilboa; Yael Roichman; Natan T Shaked
Journal:  Opt Lett       Date:  2015-04-15       Impact factor: 3.776

4.  Diffraction tomography with Fourier ptychography.

Authors:  Roarke Horstmeyer; Jaebum Chung; Xiaoze Ou; Guoan Zheng; Changhuei Yang
Journal:  Optica       Date:  2016-07-27       Impact factor: 11.104

5.  Real-time visualization of 3-D dynamic microscopic objects using optical diffraction tomography.

Authors:  Kyoohyun Kim; Kyung Sang Kim; Hyunjoo Park; Jong Chul Ye; Yongkeun Park
Journal:  Opt Express       Date:  2013-12-30       Impact factor: 3.894

6.  Hyperspectral optical diffraction tomography.

Authors:  JaeHwang Jung; Kyoohyun Kim; Jonghee Yoon; YongKeun Park
Journal:  Opt Express       Date:  2016-02-08       Impact factor: 3.894

7.  Label-free high-resolution 3-D imaging of gold nanoparticles inside live cells using optical diffraction tomography.

Authors:  Doyeon Kim; Nuri Oh; Kyoohyun Kim; SangYun Lee; Chan-Gi Pack; Ji-Ho Park; YongKeun Park
Journal:  Methods       Date:  2017-07-16       Impact factor: 3.608

8.  Three-Dimensional Holographic Refractive-Index Measurement of Continuously Flowing Cells in a Microfluidic Channel.

Authors:  Yongjin Sung; Niyom Lue; Bashar Hamza; Joseph Martel; Daniel Irimia; Ramachandra R Dasari; Wonshik Choi; Zahid Yaqoob; Peter So
Journal:  Phys Rev Appl       Date:  2014-02-27       Impact factor: 4.985

9.  Biophysics of malarial parasite exit from infected erythrocytes.

Authors:  Rajesh Chandramohanadas; YongKeun Park; Lena Lui; Ang Li; David Quinn; Kingsley Liew; Monica Diez-Silva; Yongjin Sung; Ming Dao; Chwee Teck Lim; Peter Rainer Preiser; Subra Suresh
Journal:  PLoS One       Date:  2011-06-17       Impact factor: 3.240

10.  Characterizations of individual mouse red blood cells parasitized by Babesia microti using 3-D holographic microscopy.

Authors:  HyunJoo Park; Sung-Hee Hong; Kyoohyun Kim; Shin-Hyeong Cho; Won-Ja Lee; Youngchan Kim; Sang-Eun Lee; YongKeun Park
Journal:  Sci Rep       Date:  2015-06-03       Impact factor: 4.379
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  20 in total

1.  Holotomography: Refractive Index as an Intrinsic Imaging Contrast for 3-D Label-Free Live Cell Imaging.

Authors:  Doyeon Kim; Sangyun Lee; Moosung Lee; Juntaek Oh; Su-A Yang; YongKeun Park
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

2.  Multiple-scattering suppressive refractive index tomography for the label-free quantitative assessment of multicellular spheroids.

Authors:  Osamu Yasuhiko; Kozo Takeuchi; Hidenao Yamada; Yukio Ueda
Journal:  Biomed Opt Express       Date:  2022-01-25       Impact factor: 3.732

3.  Cancer cell viscoelasticity measurement by quantitative phase and flow stress induction.

Authors:  Tomas Vicar; Jiri Chmelik; Jiri Navratil; Radim Kolar; Larisa Chmelikova; Vratislav Cmiel; Jiri Jagos; Ivo Provaznik; Michal Masarik; Jaromir Gumulec
Journal:  Biophys J       Date:  2022-04-04       Impact factor: 3.699

4.  Response to Comment on "Is the nuclear refractive index lower than cytoplasm? Validation of phase measurements and implications for light scattering technologies": A Comment on "How a phase image of a cell with nucleus refractive index smaller than that of the cytoplasm should look like?", e201800033.

Authors:  Zachary A Steelman; Will J Eldridge; Adam Wax
Journal:  J Biophotonics       Date:  2018-05-02       Impact factor: 3.207

5.  Low-coherent optical diffraction tomography by angle-scanning illumination.

Authors:  KyeoReh Lee; Seungwoo Shin; Zahid Yaqoob; Peter T C So; YongKeun Park
Journal:  J Biophotonics       Date:  2019-01-28       Impact factor: 3.207

6.  Biobeam-Multiplexed wave-optical simulations of light-sheet microscopy.

Authors:  Martin Weigert; Kaushikaram Subramanian; Sebastian T Bundschuh; Eugene W Myers; Moritz Kreysing
Journal:  PLoS Comput Biol       Date:  2018-04-13       Impact factor: 4.475

7.  Raman and quantitative phase imaging allow morpho-molecular recognition of malignancy and stages of B-cell acute lymphoblastic leukemia.

Authors:  Santosh Kumar Paidi; Piyush Raj; Rosalie Bordett; Chi Zhang; Sukrut H Karandikar; Rishikesh Pandey; Ishan Barman
Journal:  Biosens Bioelectron       Date:  2021-06-12       Impact factor: 12.545

8.  Three-dimensional label-free imaging and analysis of Pinus pollen grains using optical diffraction tomography.

Authors:  Geon Kim; SangYun Lee; Seungwoo Shin; YongKeun Park
Journal:  Sci Rep       Date:  2018-01-29       Impact factor: 4.379

9.  Label-free non-invasive quantitative measurement of lipid contents in individual microalgal cells using refractive index tomography.

Authors:  JaeHwang Jung; Seong-Joo Hong; Han-Byeol Kim; Geon Kim; Moosung Lee; Seungwoo Shin; SangYun Lee; Dong-Jin Kim; Choul-Gyun Lee; YongKeun Park
Journal:  Sci Rep       Date:  2018-04-25       Impact factor: 4.379

10.  Digital holography and its multidimensional imaging applications: a review.

Authors:  Tatsuki Tahara; Xiangyu Quan; Reo Otani; Yasuhiro Takaki; Osamu Matoba
Journal:  Microscopy (Oxf)       Date:  2018-04-01       Impact factor: 1.571
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