Literature DB >> 28736737

Diffraction tomography with Fourier ptychography.

Roarke Horstmeyer1,2, Jaebum Chung1, Xiaoze Ou1, Guoan Zheng3, Changhuei Yang1.   

Abstract

This paper presents a technique to image the complex index of refraction of a sample across three dimensions. The only required hardware is a standard microscope and an array of LEDs. The method, termed Fourier ptychographic tomography (FPT), first captures a sequence of intensity-only images of a sample under angularly varying illumination. Then, using principles from ptychography and diffraction tomography, it computationally solves for the sample structure in three dimensions. The experimental microscope demonstrates a lateral spatial resolution of 0.39 μm and an axial resolution of 3.7 μm at the Nyquist-Shannon sampling limit (0.54 and 5.0 μm at the Sparrow limit, respectively) across a total imaging depth of 110 μm. Unlike competing methods, this technique quantitatively measures the volumetric refractive index of primarily transparent and contiguous sample features without the need for interferometry or any moving parts. Wide field-of-view reconstructions of thick biological specimens suggest potential applications in pathology and developmental biology.

Entities:  

Keywords:  (110.6955) Tomographic imaging; (180.6900) Three-dimensional microscopy

Year:  2016        PMID: 28736737      PMCID: PMC5521281          DOI: 10.1364/OPTICA.3.000827

Source DB:  PubMed          Journal:  Optica            Impact factor:   11.104


  36 in total

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Authors:  Arnaud Dubois; Laurent Vabre; Alber-Claude Boccara; Emmanuel Beaurepaire
Journal:  Appl Opt       Date:  2002-02-01       Impact factor: 1.980

2.  Computational adaptive optics for broadband optical interferometric tomography of biological tissue.

Authors:  Steven G Adie; Benedikt W Graf; Adeel Ahmad; P Scott Carney; Stephen A Boppart
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-26       Impact factor: 11.205

3.  Structure determination from intensity measurements in scattering experiments.

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Journal:  Phys Rev Lett       Date:  1989-05-15       Impact factor: 9.161

4.  Ptychographic X-ray computed tomography at the nanoscale.

Authors:  Martin Dierolf; Andreas Menzel; Pierre Thibault; Philipp Schneider; Cameron M Kewish; Roger Wepf; Oliver Bunk; Franz Pfeiffer
Journal:  Nature       Date:  2010-09-23       Impact factor: 49.962

5.  Statistically principled use of in-line measurements in intensity diffraction tomography.

Authors:  Yin Huang; Mark A Anastasio
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2007-03       Impact factor: 2.129

6.  Validity of diffraction tomography based on the first born and the first rytov approximations.

Authors:  B Chen; J J Stamnes
Journal:  Appl Opt       Date:  1998-05-10       Impact factor: 1.980

7.  Phaseless imaging with experimental data: facts and challenges.

Authors:  Michele D'Urso; Kamal Belkebir; Lorenzo Crocco; Tommaso Isernia; Amélie Litman
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2008-01       Impact factor: 2.129

8.  Mesenchyme cells can function to induce epithelial cell proliferation in starfish embryos.

Authors:  Gen Hamanaka; Midori Matsumoto; Masaya Imoto; Hiroyuki Kaneko
Journal:  Dev Dyn       Date:  2010-03       Impact factor: 3.780

9.  Ptychographic microscope for three-dimensional imaging.

Authors:  T M Godden; R Suman; M J Humphry; J M Rodenburg; A M Maiden
Journal:  Opt Express       Date:  2014-05-19       Impact factor: 3.894

10.  Wide-field, high-resolution Fourier ptychographic microscopy.

Authors:  Guoan Zheng; Roarke Horstmeyer; Changhuei Yang
Journal:  Nat Photonics       Date:  2013-09-01       Impact factor: 38.771

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  30 in total

1.  Three-dimensional tomographic microscopy technique with multi-frequency combination with partially coherent illuminations.

Authors:  Jiaji Li; Qian Chen; Jiasong Sun; Jialin Zhang; Junyi Ding; Chao Zuo
Journal:  Biomed Opt Express       Date:  2018-05-07       Impact factor: 3.732

2.  Aperture scanning Fourier ptychographic microscopy.

Authors:  Xiaoze Ou; Jaebum Chung; Roarke Horstmeyer; Changhuei Yang
Journal:  Biomed Opt Express       Date:  2016-07-29       Impact factor: 3.732

3.  Correlative three-dimensional fluorescence and refractive index tomography: bridging the gap between molecular specificity and quantitative bioimaging.

Authors:  Kyoohyun Kim; Wei Sun Park; Sangchan Na; Sangbum Kim; Taehong Kim; Won Do Heo; YongKeun Park
Journal:  Biomed Opt Express       Date:  2017-11-17       Impact factor: 3.732

4.  Structured illumination microscopy for dual-modality 3D sub-diffraction resolution fluorescence and refractive-index reconstruction.

Authors:  Shwetadwip Chowdhury; Will J Eldridge; Adam Wax; Joseph A Izatt
Journal:  Biomed Opt Express       Date:  2017-11-28       Impact factor: 3.732

5.  High-throughput intensity diffraction tomography with a computational microscope.

Authors:  Ruilong Ling; Waleed Tahir; Hsing-Ying Lin; Hakho Lee; Lei Tian
Journal:  Biomed Opt Express       Date:  2018-04-05       Impact factor: 3.732

6.  Ptychographic imaging of NaD1 induced yeast cell death.

Authors:  Nicholas Anthony; Connie Darmanin; Mark R Bleackley; Kathy Parisi; Guido Cadenazzi; Susannah Holmes; Marilyn A Anderson; Keith A Nugent; Brian Abbey
Journal:  Biomed Opt Express       Date:  2019-09-06       Impact factor: 3.732

7.  Diffraction tomography with a deep image prior.

Authors:  Kevin C Zhou; Roarke Horstmeyer
Journal:  Opt Express       Date:  2020-04-27       Impact factor: 3.894

8.  Acoustofluidic Scanning Nanoscope with High Resolution and Large Field of View.

Authors:  Geonsoo Jin; Hunter Bachman; Ty Downing Naquin; Joseph Rufo; Serena Hou; Zhenhua Tian; Chenglong Zhao; Tony Jun Huang
Journal:  ACS Nano       Date:  2020-06-23       Impact factor: 15.881

9.  High-resolution 3D Fourier ptychographic reconstruction using a hemispherical illumination source with multiplexed-coded strategy.

Authors:  Minglu Sun; Lina Shao; Jinrui Zhang; Youqiang Zhu; Peilin Wu; Yukun Wang; Zhihui Diao; QuanQuan Mu; Dayu Li; Hongda Wang; Li Xuan
Journal:  Biomed Opt Express       Date:  2022-03-14       Impact factor: 3.732

10.  LED array reflectance microscopy for scattering-based multi-contrast imaging.

Authors:  Weiye Song; Alex Matlock; Sipei Fu; Xiaodan Qin; Hui Feng; Christopher V Gabel; Lei Tian; Ji Yi
Journal:  Opt Lett       Date:  2020-04-01       Impact factor: 3.776

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