Literature DB >> 29279410

ALKBH5-dependent m6A demethylation controls splicing and stability of long 3'-UTR mRNAs in male germ cells.

Chong Tang1, Rachel Klukovich1, Hongying Peng1, Zhuqing Wang1, Tian Yu1, Ying Zhang1, Huili Zheng1, Arne Klungland2,3, Wei Yan4,5.   

Abstract

N6-methyladenosine (m6A) represents one of the most common RNA modifications in eukaryotes. Specific m6A writer, eraser, and reader proteins have been identified. As an m6A eraser, ALKBH5 specifically removes m6A from target mRNAs and inactivation of Alkbh5 leads to male infertility in mice. However, the underlying molecular mechanism remains unknown. Here, we report that ALKBH5-mediated m6A erasure in the nuclei of spermatocytes and round spermatids is essential for correct splicing and the production of longer 3'-UTR mRNAs, and failure to do so leads to aberrant splicing and production of shorter transcripts with elevated levels of m6A that are rapidly degraded. Our study identified reversible m6A modification as a critical mechanism of posttranscriptional control of mRNA fate in late meiotic and haploid spermatogenic cells.

Entities:  

Keywords:  3′-UTR shortening; RNA methylation; alternative splicing; fertility; mRNA stability

Mesh:

Substances:

Year:  2017        PMID: 29279410      PMCID: PMC5777073          DOI: 10.1073/pnas.1717794115

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  53 in total

Review 1.  Altered protamine expression and diminished spermatogenesis: what is the link?

Authors:  Douglas T Carrell; Benjamin R Emery; Sue Hammoud
Journal:  Hum Reprod Update       Date:  2007-01-05       Impact factor: 15.610

Review 2.  RNA decay, evolution, and the testis.

Authors:  Samantha H Jones; Miles Wilkinson
Journal:  RNA Biol       Date:  2016-12-02       Impact factor: 4.652

3.  Ythdc2 is an N6-methyladenosine binding protein that regulates mammalian spermatogenesis.

Authors:  Phillip J Hsu; Yunfei Zhu; Honghui Ma; Yueshuai Guo; Xiaodan Shi; Yuanyuan Liu; Meijie Qi; Zhike Lu; Hailing Shi; Jianying Wang; Yiwei Cheng; Guanzheng Luo; Qing Dai; Mingxi Liu; Xuejiang Guo; Jiahao Sha; Bin Shen; Chuan He
Journal:  Cell Res       Date:  2017-08-15       Impact factor: 25.617

4.  Sequences containing methylated nucleotides at the 5' termini of messenger RNAs: possible implications for processing.

Authors:  F Rottman; A J Shatkin; R P Perry
Journal:  Cell       Date:  1974-11       Impact factor: 41.582

5.  Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons.

Authors:  Kate D Meyer; Yogesh Saletore; Paul Zumbo; Olivier Elemento; Christopher E Mason; Samie R Jaffrey
Journal:  Cell       Date:  2012-05-17       Impact factor: 41.582

6.  ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility.

Authors:  Guanqun Zheng; John Arne Dahl; Yamei Niu; Peter Fedorcsak; Chun-Min Huang; Charles J Li; Cathrine B Vågbø; Yue Shi; Wen-Ling Wang; Shu-Hui Song; Zhike Lu; Ralph P G Bosmans; Qing Dai; Ya-Juan Hao; Xin Yang; Wen-Ming Zhao; Wei-Min Tong; Xiu-Jie Wang; Florian Bogdan; Kari Furu; Ye Fu; Guifang Jia; Xu Zhao; Jun Liu; Hans E Krokan; Arne Klungland; Yun-Gui Yang; Chuan He
Journal:  Mol Cell       Date:  2012-11-21       Impact factor: 17.970

7.  The RNA Modification Database, RNAMDB: 2011 update.

Authors:  William A Cantara; Pamela F Crain; Jef Rozenski; James A McCloskey; Kimberly A Harris; Xiaonong Zhang; Franck A P Vendeix; Daniele Fabris; Paul F Agris
Journal:  Nucleic Acids Res       Date:  2010-11-10       Impact factor: 16.971

8.  Differential expression analysis for sequence count data.

Authors:  Simon Anders; Wolfgang Huber
Journal:  Genome Biol       Date:  2010-10-27       Impact factor: 13.583

9.  Systematic variation in mRNA 3'-processing signals during mouse spermatogenesis.

Authors:  Donglin Liu; J Michael Brockman; Brinda Dass; Lucie N Hutchins; Priyam Singh; John R McCarrey; Clinton C MacDonald; Joel H Graber
Journal:  Nucleic Acids Res       Date:  2006-12-08       Impact factor: 16.971

10.  FTO-dependent demethylation of N6-methyladenosine regulates mRNA splicing and is required for adipogenesis.

Authors:  Xu Zhao; Ying Yang; Bao-Fa Sun; Yue Shi; Xin Yang; Wen Xiao; Ya-Juan Hao; Xiao-Li Ping; Yu-Sheng Chen; Wen-Jia Wang; Kang-Xuan Jin; Xing Wang; Chun-Min Huang; Yu Fu; Xiao-Meng Ge; Shu-Hui Song; Hyun Seok Jeong; Hiroyuki Yanagisawa; Yamei Niu; Gui-Fang Jia; Wei Wu; Wei-Min Tong; Akimitsu Okamoto; Chuan He; Jannie M Rendtlew Danielsen; Xiu-Jie Wang; Yun-Gui Yang
Journal:  Cell Res       Date:  2014-11-21       Impact factor: 25.617

View more
  152 in total

1.  N6-Methyladenosine methyltransferase ZCCHC4 mediates ribosomal RNA methylation.

Authors:  Honghui Ma; Xiaoyun Wang; Jiabin Cai; Qing Dai; S Kundhavai Natchiar; Ruitu Lv; Kai Chen; Zhike Lu; Hao Chen; Yujiang Geno Shi; Fei Lan; Jia Fan; Bruno P Klaholz; Tao Pan; Yang Shi; Chuan He
Journal:  Nat Chem Biol       Date:  2018-12-10       Impact factor: 15.040

Review 2.  Where, When, and How: Context-Dependent Functions of RNA Methylation Writers, Readers, and Erasers.

Authors:  Hailing Shi; Jiangbo Wei; Chuan He
Journal:  Mol Cell       Date:  2019-05-16       Impact factor: 17.970

Review 3.  Small changes, big implications: The impact of m6A RNA methylation on gene expression in pluripotency and development.

Authors:  Adam M Heck; Carol J Wilusz
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2019-07-17       Impact factor: 4.490

Review 4.  Epigenetic changes in mammalian gametes throughout their lifetime: the four seasons metaphor.

Authors:  Peera Wasserzug-Pash; Michael Klutstein
Journal:  Chromosoma       Date:  2019-04-27       Impact factor: 4.316

Review 5.  N6-methyladenosine modifications: interactions with novel RNA-binding proteins and roles in signal transduction.

Authors:  Jiaxin Chen; Xiao Fang; Pengcheng Zhong; Zhangfa Song; Xiaotong Hu
Journal:  RNA Biol       Date:  2019-05-26       Impact factor: 4.652

6.  Modeling multi-species RNA modification through multi-task curriculum learning.

Authors:  Yuanpeng Xiong; Xuan He; Dan Zhao; Tingzhong Tian; Lixiang Hong; Tao Jiang; Jianyang Zeng
Journal:  Nucleic Acids Res       Date:  2021-04-19       Impact factor: 16.971

Review 7.  The Epitranscriptome in Translation Regulation.

Authors:  Eyal Peer; Sharon Moshitch-Moshkovitz; Gideon Rechavi; Dan Dominissini
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-08-01       Impact factor: 10.005

Review 8.  Regulation of Gene Expression by N6-methyladenosine in Cancer.

Authors:  Jun Liu; Bryan T Harada; Chuan He
Journal:  Trends Cell Biol       Date:  2019-03-30       Impact factor: 20.808

9.  Unraveling the RNA modification code with mass spectrometry.

Authors:  Richard Lauman; Benjamin A Garcia
Journal:  Mol Omics       Date:  2020-04-14

10.  Reprogramming of m6A epitranscriptome is crucial for shaping of transcriptome and proteome in response to hypoxia.

Authors:  Yan-Jie Wang; Bing Yang; Qiao Lai; Jun-Fang Shi; Jiang-Yun Peng; Yin Zhang; Kai-Shun Hu; Ya-Qing Li; Jing-Wen Peng; Zhi-Zhi Yang; Yao-Ting Li; Yue Pan; H Phillip Koeffler; Jian-You Liao; Dong Yin
Journal:  RNA Biol       Date:  2020-08-18       Impact factor: 4.652

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.