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Literature DB >> 30037968

The Epitranscriptome in Translation Regulation.

Eyal Peer¹, Sharon Moshitch-Moshkovitz¹, Gideon Rechavi¹, Dan Dominissini¹.

Abstract

The cellular proteome reflects the total outcome of many regulatory mechanisms that affect the metabolism of messenger RNA (mRNA) along its pathway from synthesis to degradation. Accumulating evidence in recent years has uncovered the roles of a growing number of mRNA modifications in every step along this pathway, shaping translational output. mRNA modifications affect the translation machinery directly, by influencing translation initiation, elongation and termination, or by altering mRNA levels and subcellular localization. Features of modification-related translational control are described, charting a new and complex layer of translational regulation.

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Year: 2019 PMID： 30037968 PMCID： PMC6671940 DOI： 10.1101/cshperspect.a032623

Source DB: PubMed Journal: Cold Spring Harb Perspect Biol ISSN： 1943-0264 Impact factor: 10.005

112 in total

1. Suppression of RNA recognition by Toll-like receptors: the impact of nucleoside modification and the evolutionary origin of RNA.

Authors: Katalin Karikó; Michael Buckstein; Houping Ni; Drew Weissman
Journal: Immunity Date: 2005-08 Impact factor: 31.745

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Journal: Biochemistry Date: 1976-01-27 Impact factor: 3.162

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Authors: Zhaiyi Zhang; Dominik Theler; Katarzyna H Kaminska; Michael Hiller; Pierre de la Grange; Rainer Pudimat; Ilona Rafalska; Bettina Heinrich; Janusz M Bujnicki; Frédéric H-T Allain; Stefan Stamm
Journal: J Biol Chem Date: 2010-02-18 Impact factor: 5.157

4. Incorporation of pseudouridine into mRNA yields superior nonimmunogenic vector with increased translational capacity and biological stability.

Authors: Katalin Karikó; Hiromi Muramatsu; Frank A Welsh; János Ludwig; Hiroki Kato; Shizuo Akira; Drew Weissman
Journal: Mol Ther Date: 2008-09-16 Impact factor: 11.454

5. Cloning of a gene, YT521, for a novel RNA splicing-related protein induced by hypoxia/reoxygenation.

Authors: Y Imai; N Matsuo; S Ogawa; M Tohyama; T Takagi
Journal: Brain Res Mol Brain Res Date: 1998-01

6. Cytoplasmic m⁶A reader YTHDF3 promotes mRNA translation.

Authors: Ang Li; Yu-Sheng Chen; Xiao-Li Ping; Xin Yang; Wen Xiao; Ying Yang; Hui-Ying Sun; Qin Zhu; Poonam Baidya; Xing Wang; Devi Prasad Bhattarai; Yong-Liang Zhao; Bao-Fa Sun; Yun-Gui Yang
Journal: Cell Res Date: 2017-01-20 Impact factor: 25.617

Review 7. Noncanonical Translation Initiation in Eukaryotes.

Authors: Thaddaeus Kwan; Sunnie R Thompson
Journal: Cold Spring Harb Perspect Biol Date: 2019-04-01 Impact factor: 10.005

8. Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA.

Authors: Jeffrey E Squires; Hardip R Patel; Marco Nousch; Tennille Sibbritt; David T Humphreys; Brian J Parker; Catherine M Suter; Thomas Preiss
Journal: Nucleic Acids Res Date: 2012-02-16 Impact factor: 16.971

9. Distinct 5-methylcytosine profiles in poly(A) RNA from mouse embryonic stem cells and brain.

Authors: Thomas Amort; Dietmar Rieder; Alexandra Wille; Daria Khokhlova-Cubberley; Christian Riml; Lukas Trixl; Xi-Yu Jia; Ronald Micura; Alexandra Lusser
Journal: Genome Biol Date: 2017-01-05 Impact factor: 13.583

10. Dynamic m(6)A mRNA methylation directs translational control of heat shock response.

Authors: Jun Zhou; Ji Wan; Xiangwei Gao; Xingqian Zhang; Samie R Jaffrey; Shu-Bing Qian
Journal: Nature Date: 2015-10-12 Impact factor: 49.962

12 in total

Review 1. Noncanonical Translation Initiation in Eukaryotes.

Authors: Thaddaeus Kwan; Sunnie R Thompson
Journal: Cold Spring Harb Perspect Biol Date: 2019-04-01 Impact factor: 10.005

Review 2. Ribosome Profiling: Global Views of Translation.

Authors: Nicholas T Ingolia; Jeffrey A Hussmann; Jonathan S Weissman
Journal: Cold Spring Harb Perspect Biol Date: 2019-05-01 Impact factor: 10.005

Review 3. Translational Control during Developmental Transitions.

Authors: Felipe Karam Teixeira; Ruth Lehmann
Journal: Cold Spring Harb Perspect Biol Date: 2019-06-03 Impact factor: 10.005

Review 4. Roles of Long Noncoding RNAs and Circular RNAs in Translation.

Authors: Marina Chekulaeva; Nikolaus Rajewsky
Journal: Cold Spring Harb Perspect Biol Date: 2019-06-03 Impact factor: 10.005

5. Metabolic Signatures of Life Span Regulated by Mating, Sex Peptide, and Mifepristone/RU486 in Female Drosophila melanogaster.

Authors: Gary N Landis; Devon V Doherty; Chia-An Yen; Lu Wang; Yang Fan; Ina Wang; Jonah Vroegop; Tianyi Wang; Jimmy Wu; Palak Patel; Shinwoo Lee; Mina Abdelmesieh; Jie Shen; Daniel E L Promislow; Sean P Curran; John Tower
Journal: J Gerontol A Biol Sci Med Sci Date: 2021-01-18 Impact factor: 6.053

6. Reprogramming of m⁶A epitranscriptome is crucial for shaping of transcriptome and proteome in response to hypoxia.

Authors: Yan-Jie Wang; Bing Yang; Qiao Lai; Jun-Fang Shi; Jiang-Yun Peng; Yin Zhang; Kai-Shun Hu; Ya-Qing Li; Jing-Wen Peng; Zhi-Zhi Yang; Yao-Ting Li; Yue Pan; H Phillip Koeffler; Jian-You Liao; Dong Yin
Journal: RNA Biol Date: 2020-08-18 Impact factor: 4.652