Literature DB >> 31107151

N6-methyladenosine modifications: interactions with novel RNA-binding proteins and roles in signal transduction.

Jiaxin Chen1, Xiao Fang2, Pengcheng Zhong1, Zhangfa Song3, Xiaotong Hu1.   

Abstract

RNA epigenetics has received a great deal of attention in recent years, and the reversible N6-methyladenosine (m6A) modification on messenger RNAs (mRNAs) has emerged as a widespread phenomenon. The vital roles of m6A in diverse biological processes are dependent on many RNA-binding proteins (RBPs) with 'reader' or 'nonreader' functions. Moreover, m6A effector proteins affect cellular processes, such as stem cell differentiation, tumor development and the immune response by controlling signal transduction. This review provides an overview of the interactions of m6A with various RBPs, including the 'reader' proteins (excluding the YT521-B homology (YTH) domain proteins and the heterogeneous nuclear ribonucleoproteins (hnRNPs)), and the functional 'nonreader' proteins, and this review focuses on their specific RNA-binding domains and their associations with other m6A effectors. Furthermore, we summarize key m6A-marked targets in distinct signaling pathways, leading to a better understanding of the cellular m6A machinery.

Entities:  

Keywords:  M6a reader; RNA-binding protein; protein domain; signaling pathway

Mesh:

Substances:

Year:  2019        PMID: 31107151      PMCID: PMC6602412          DOI: 10.1080/15476286.2019.1620060

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  101 in total

1.  Transcriptome-wide analysis of regulatory interactions of the RNA-binding protein HuR.

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Journal:  Mol Cell       Date:  2011-06-30       Impact factor: 17.970

2.  N6-methyladenosine modification destabilizes developmental regulators in embryonic stem cells.

Authors:  Yang Wang; Yue Li; Julia I Toth; Matthew D Petroski; Zhaolei Zhang; Jing Crystal Zhao
Journal:  Nat Cell Biol       Date:  2014-01-07       Impact factor: 28.824

3.  Regulation of m6A Transcripts by the 3'→5' RNA Helicase YTHDC2 Is Essential for a Successful Meiotic Program in the Mammalian Germline.

Authors:  Magdalena Natalia Wojtas; Radha Raman Pandey; Mateusz Mendel; David Homolka; Ravi Sachidanandam; Ramesh S Pillai
Journal:  Mol Cell       Date:  2017-10-12       Impact factor: 17.970

Review 4.  Dynamic integration of splicing within gene regulatory pathways.

Authors:  Ulrich Braunschweig; Serge Gueroussov; Alex M Plocik; Brenton R Graveley; Benjamin J Blencowe
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

Review 5.  The mechanism of eukaryotic translation initiation and principles of its regulation.

Authors:  Richard J Jackson; Christopher U T Hellen; Tatyana V Pestova
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6.  Detection of N6-methyladenosine based on the methyl-sensitivity of MazF RNA endonuclease.

Authors:  Miki Imanishi; Shogo Tsuji; Akiyo Suda; Shiroh Futaki
Journal:  Chem Commun (Camb)       Date:  2017-11-30       Impact factor: 6.222

7.  N6-methyladenosine RNA modification regulates embryonic neural stem cell self-renewal through histone modifications.

Authors:  Yang Wang; Yue Li; Minghui Yue; Jun Wang; Sandeep Kumar; Robert J Wechsler-Reya; Zhaolei Zhang; Yuya Ogawa; Manolis Kellis; Gregg Duester; Jing Crystal Zhao
Journal:  Nat Neurosci       Date:  2018-01-15       Impact factor: 24.884

8.  Ythdf2-mediated m6A mRNA clearance modulates neural development in mice.

Authors:  Miaomiao Li; Xu Zhao; Wei Wang; Hailing Shi; Qingfei Pan; Zhike Lu; Sonia Peña Perez; Rajikala Suganthan; Chuan He; Magnar Bjørås; Arne Klungland
Journal:  Genome Biol       Date:  2018-05-31       Impact factor: 13.583

9.  Zc3h13/Flacc is required for adenosine methylation by bridging the mRNA-binding factor Rbm15/Spenito to the m6A machinery component Wtap/Fl(2)d.

Authors:  Philip Knuckles; Tina Lence; Irmgard U Haussmann; Dominik Jacob; Nastasja Kreim; Sarah H Carl; Irene Masiello; Tina Hares; Rodrigo Villaseñor; Daniel Hess; Miguel A Andrade-Navarro; Marco Biggiogera; Mark Helm; Matthias Soller; Marc Bühler; Jean-Yves Roignant
Journal:  Genes Dev       Date:  2018-03-13       Impact factor: 11.361

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Authors:  Simon Müller; Nadine Bley; Markus Glaß; Bianca Busch; Vanessa Rousseau; Danny Misiak; Tommy Fuchs; Marcell Lederer; Stefan Hüttelmaier
Journal:  Nucleic Acids Res       Date:  2018-07-06       Impact factor: 16.971

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  26 in total

Review 1.  N6-methyladenosine as a Novel Regulator of Brain Physiology and Diseases.

Authors:  Bing Han; Hong-Hong Yao
Journal:  Curr Med Sci       Date:  2020-07-17

2.  Abnormal 5-methylcytosine lncRNA methylome is involved in human high-grade serous ovarian cancer.

Authors:  Li Meng; Qianqian Zhang; Xianghua Huang
Journal:  Am J Transl Res       Date:  2021-12-15       Impact factor: 4.060

3.  METTL3 facilitates multiple myeloma tumorigenesis by enhancing YY1 stability and pri-microRNA-27 maturation in m6A-dependent manner.

Authors:  Feifei Che; Xuemei Ye; Yu Wang; Xuemei Wang; Shuyue Ma; Yawen Tan; Yan Mao; Ziyue Luo
Journal:  Cell Biol Toxicol       Date:  2022-01-17       Impact factor: 6.691

Review 4.  Emerging role of m6A modification in osteogenesis of stem cells.

Authors:  Zi Zou; Tiantian He; Ying Liu; Leliang Zheng; Yancheng Zhong; Yuqing Mo; Shuping Peng; Cijun Shuai
Journal:  J Bone Miner Metab       Date:  2022-01-29       Impact factor: 2.626

5.  ALKBH5 inhibits TNF-α-induced apoptosis of HUVECs through Bcl-2 pathway.

Authors:  Xiaoshan Zhang; ShiBing Deng; Yang Peng; Han Wei; Zhiming Tian
Journal:  Open Med (Wars)       Date:  2022-06-15

6.  Reprogramming of m6A epitranscriptome is crucial for shaping of transcriptome and proteome in response to hypoxia.

Authors:  Yan-Jie Wang; Bing Yang; Qiao Lai; Jun-Fang Shi; Jiang-Yun Peng; Yin Zhang; Kai-Shun Hu; Ya-Qing Li; Jing-Wen Peng; Zhi-Zhi Yang; Yao-Ting Li; Yue Pan; H Phillip Koeffler; Jian-You Liao; Dong Yin
Journal:  RNA Biol       Date:  2020-08-18       Impact factor: 4.652

Review 7.  New progresses of circular RNA biology: from nuclear export to degradation.

Authors:  Min Zhou; Mei-Sheng Xiao; Zhengguo Li; Chuan Huang
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8.  Impact of the gut microbiota on the m6A epitranscriptome of mouse cecum and liver.

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Journal:  Nat Commun       Date:  2020-03-12       Impact factor: 14.919

9.  HNRNPA2B1 Affects the Prognosis of Esophageal Cancer by Regulating the miR-17-92 Cluster.

Authors:  Kexin Li; Jiongyu Chen; Xiaoying Lou; Yiling Li; Benheng Qian; Danfei Xu; Yue Wu; Shaohui Ma; Donghong Zhang; Wei Cui
Journal:  Front Cell Dev Biol       Date:  2021-06-30

10.  METTL3 Facilitates Oral Squamous Cell Carcinoma Tumorigenesis by Enhancing c-Myc Stability via YTHDF1-Mediated m6A Modification.

Authors:  Wei Zhao; Yameng Cui; Lina Liu; Xiaozhou Ma; Xiaoqian Qi; Yue Wang; Zihao Liu; Shiqing Ma; Jingwen Liu; Jie Wu
Journal:  Mol Ther Nucleic Acids       Date:  2020-02-04       Impact factor: 8.886

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