| Literature DB >> 29258278 |
Jennifer A Smith1,2, Wei Zhao3, Kalyn Yasutake4, Carmella August5, Scott M Ratliff6, Jessica D Faul7, Eric Boerwinkle8, Aravinda Chakravarti9, Ana V Diez Roux10, Yan Gao11, Michael E Griswold12, Gerardo Heiss13, Sharon L R Kardia14, Alanna C Morrison15, Solomon K Musani16, Stanford Mwasongwe17, Kari E North18, Kathryn M Rose19, Mario Sims20, Yan V Sun21, David R Weir22, Belinda L Needham23.
Abstract
Inter-individual variability in blood pressure (BP) is influenced by both genetic and non-genetic factors including socioeconomic and psychosocial stressors. A deeper understanding of the gene-by-socioeconomic/psychosocial factor interactions on BP may help to identify individuals that are genetically susceptible to high BP in specific social contexts. In this study, we used a genomic region-based method for longitudinal analysis, Longitudinal Gene-Environment-Wide Interaction Studies (LGEWIS), to evaluate the effects of interactions between known socioeconomic/psychosocial and genetic risk factors on systolic and diastolic BP in four large epidemiologic cohorts of European and/or African ancestry. After correction for multiple testing, two interactions were significantly associated with diastolic BP. In European ancestry participants, outward/trait anger score had a significant interaction with the C10orf107 genomic region (p = 0.0019). In African ancestry participants, depressive symptom score had a significant interaction with the HFE genomic region (p = 0.0048). This study provides a foundation for using genomic region-based longitudinal analysis to identify subgroups of the population that may be at greater risk of elevated BP due to the combined influence of genetic and socioeconomic/psychosocial risk factors.Entities:
Keywords: blood pressure; chronic burden; depression; gene-by-environment interaction; genetics; hypertension; non-burden test; psychosocial factors; socioeconomic status
Mesh:
Year: 2017 PMID: 29258278 PMCID: PMC5751013 DOI: 10.3390/ijerph14121596
Source DB: PubMed Journal: Int J Environ Res Public Health ISSN: 1660-4601 Impact factor: 3.390
Baseline a descriptive statistics for four cohort studies.
| ARIC | HRS | JHS | MESA | |||||
|---|---|---|---|---|---|---|---|---|
| Total N b | Mean (SD) or N (%) | Total N b | Mean (SD) or N (%) | Total N b | Mean (SD) or N (%) | Total N b | Mean (SD) or N (%) | |
| Gender (Male) | 9274 | 4379 (47) | 9441 | 4037 (43) | -- | -- | 2518 | 1205 (48) |
| Age, years | 9274 | 54.3 (5.7) | 9441 | 67.3 (10.9) | -- | -- | 2518 | 62.7 (10.2) |
| BMI, kg/m2 | 9274 | 26.9 (4.7) | 9441 | 28.9 (5.6) | -- | -- | 2518 | 27.7 (5.0) |
| SBP, mmHg c | 9265 | 122.0 (19.3) | 9440 | 136.8 (22.5) | -- | -- | 2516 | 128.4 (23.0) |
| DBP, mmHg c | 9266 | 74.1 (11.4) | 9434 | 83.7 (12.3) | -- | -- | 2518 | 73.5 (11.3) |
| Lower Adult SES d | 9262 | 4826 (52) | 9420 | 4704 (50) | -- | -- | 2510 | 549 (22) |
| Lower Childhood SES e | 7338 | 3877 (53%) | 8462 | 3204 (38%) | -- | -- | 2359 | 677 (29) |
| Outward/Trait Anger Score | 8920 | 1.6 (0.4) | 8574 | 1.5 (0.5) | -- | -- | 2509 | 1.5 (0.3) |
| Depressive Symptom Score | 8924 | 0.2 (0.2) | 9441 | 0.2 (0.2) | -- | -- | 2507 | 0.1 (0.1) |
| Chronic Burden Score | -- | -- | 5167 | 1.7 (1.3) | -- | -- | 2510 | 1.1 (1.1) |
| Gender (Male) | 3155 | 1182 (38) | 2060 | 770 (37) | 2117 | 836 (40) | 1608 | 743 (46) |
| Age, years | 3155 | 53.4 (5.8) | 2060 | 63.2 (10.5) | 2117 | 50.4 (12.0) | 1608 | 62.3 (10.1) |
| BMI, kg/m2 | 3155 | 29.5 (5.8) | 2060 | 30.6 (6.5) | 2117 | 32.1 (7.3) | 1608 | 30.1 (5.8) |
| SBP, mmHg c | 3146 | 134.6 (22.4) | 2060 | 144.1 (24.3) | 2115 | 131.7 (19.5) | 1606 | 139.1 (24.5) |
| DBP, mmHg c | 3153 | 84.1 (13.4) | 2059 | 88.8 (13.7) | 2117 | 80.8 (10.3) | 1607 | 79.5 (11.7) |
| Lower Adult SES d | 3148 | 1931 (61) | 2055 | 1294 (63) | 2113 | 637 (30) | 1595 | 497 (31) |
| Lower Childhood SES e | 2014 | 1541 (77%) | 1759 | 1025 (58%) | 1824 | 855 (47) | 1412 | 623 (44) |
| Outward/Trait Anger Score | 2885 | 1.6 (0.4) | 1502 | 1.5 (0.5) | 1380 | 1.6 (0.4) | 1593 | 1.4 (0.3) |
| Depressive Symptom Score | 2887 | 0.3 (0.2) | 2058 | 0.2 (0.3) | 1429 | 0.2 (0.2) | 1590 | 0.1 (0.1) |
| Chronic Burden Score | -- | -- | 982 | 2.2 (1.4) | 1506 | 0.9 (1.2) | 1593 | 1.2 (1.2) |
ARIC: Atherosclerosis Risk in Communities; HRS: Health and Retirement Study; JHS: Jackson Heart Study; MESA: Multi-Ethnic Study of Atherosclerosis; BMI: body mass index; SBP: systolic blood pressure; DBP: diastolic blood pressure; SES: socioeconomic status. a Baseline was defined as the first exam at which each measure was taken. For ARIC, all measures were taken at Exam 1 except for anger and depressive symptoms scores, which were first measured at Exam 2. For HRS, blood pressure (BP) was measured at alternating exam dates (during the face-to-face exam only), so values for all measures reflect the corresponding year at which BP was first measured (2006, 2008, or 2010). Chronic burden was not measured in HRS in 2008. For JHS, all measures were taken at Exam 1 except chronic burden, which was first measured at Exam 3. For MESA, all measures were taken at Exam 1. b Total N reflects the number of non-missing values with valid measures on SBP or DBP, gender, age and BMI. c For participants taking antihypertensive medications, 15 and 10 mmHg were added to SBP and DBP, respectively. d High school degree or less. e Parental education less than high school degree.
Meta-analysis of the association between each socioeconomic or psychosocial factor and blood pressure.
| SBP | DBP | |||
|---|---|---|---|---|
| Beta | Beta | |||
| Lower Adult SES a | 2.83 | <5 × 10−6 | 0.52 | 3.6 × 10−4 |
| Lower Childhood SES b | 1.83 | <5 × 10−6 | 0.12 | 0.431 |
| Outward/Trait Anger Score | 0.42 | 0.097 | 0.13 | 0.375 |
| Depressive Symptom Score | 0.32 | 0.566 | −0.24 | 0.459 |
| Chronic Burden Score | −0.02 | 0.871 | −0.03 | 0.629 |
| Lower Adult SES a | 2.77 | <5 × 10−6 | 1.10 | <5 × 10−6 |
| Lower Childhood SES b | 0.52 | 0.268 | −0.04 | 0.887 |
| Outward/Trait Anger Score | 0.95 | 0.027 | 0.57 | 0.019 |
| Depressive Symptom Score | 1.36 | 0.186 | 1.80 | 0.002 |
| Chronic Burden Score | 0.64 | 0.002 | 0.25 | 0.020 |
| Lower Adult SES a | 2.81 | <5 × 10−6 | 0.68 | <5 × 10−6 |
| Lower Childhood SES b | 1.49 | <5 × 10−6 | 0.08 | 0.545 |
| Outward/Trait Anger Score | 0.56 | 0.011 | 0.24 | 0.050 |
| Depressive Symptom Score | 0.56 | 0.255 | 0.25 | 0.377 |
| Chronic Burden Score | 0.16 | 0.142 | 0.05 | 0.408 |
a High school degree or less. b Parental education less than high school degree. Generalized estimating equations were used to model the effect of each socioeconomic/psychosocial factor separately on SBP or DBP, adjusting for sex and age, age2, and BMI at the time of BP measurement. Betas and p-values represent beta coefficients (effect estimates) for the socioeconomic/psychosocial factors from the inverse variance-weighted fixed effects meta-analysis across cohorts and their corresponding p-values.
p-values from meta-analysis of the association between each genomic region and blood pressure.
| SBP | DBP | |||||
|---|---|---|---|---|---|---|
| Genomic Region | EA | AA | EA + AA | EA | AA | EA + AA |
| 0.9122 | 0.4840 | 0.7648 | 0.6353 | 0.8013 | ||
| <5 × 10−6 | 0.9550 | <5 × 10−6
| 0.6745 | |||
| 0.5830 | 0.6999 | 0.7427 | 0.6535 | 0.5613 | 0.6999 | |
| 0.2420 | 0.7852 | 0.5516 | ||||
| 0.6633 | 0.4553 | |||||
| 0.5212 | ||||||
| 0.9461 | 0.5335 | |||||
| 0.2659 | ||||||
| 0.2639 | 0.6453 | |||||
| 0.3570 | ||||||
| 0.8904 | 0.9941 | |||||
| 0.6324 | ||||||
| 0.6174 | 0.3960 | 0.3966 | 0.4036 | |||
| 0.2518 | 0.2767 | 0.2230 | ||||
| 0.6792 | 0.3302 | |||||
| rs10850411 | 0.3666 | 0.2214 | 0.2460 | 0.5504 | ||
| rs1173771 | 0.2511 | 0.5098 | 0.3729 | 0.7050 | 0.6744 | 0.7945 |
| rs11953630 | 0.3041 | 0.4429 | 0.3722 | 0.4752 | ||
| rs13082711 | 0.7951 | 0.2571 | ||||
| rs13209747 | 0.5173 | 0.5513 | ||||
| rs1327235 | ||||||
| rs1458038 | 0.3549 | 0.4374 | ||||
| rs17428471 | 1.7 × 10−5
| |||||
| rs2932538 | 0.8772 | 0.3506 | 0.4944 | 0.9010 | 0.8393 | |
| rs4373814 | 0.4816 | 0.2120 | 0.5541 | 0.3639 | ||
| rs7129220 | 0.4061 | 0.8965 | 0.7845 | 0.4627 | 0.6577 | 0.6413 |
| 0.2540 | ||||||
| 0.2630 | 0.4592 | 0.3505 | 0.4093 | 0.3212 | 0.3527 | |
| 0.7271 | ||||||
| 0.3536 | 0.6047 | 0.5235 | 0.2123 | |||
| 0.7850 | 0.2508 | 0.2715 | ||||
| 0.8755 | 0.4803 | 0.4666 | 0.2681 | |||
| Number of genes with | 21 | 11 | 21 | 21 | 10 | 23 |
| Number of genes with FDR | 12 | 0 | 7 | 10 | 0 | 8 |
EA = European ancestry; AA = African ancestry. Longitudinal Gene-Environment-Wide Interaction Studies (LGEWIS) was used to model the effect of each gene region separately on SBP or DBP, adjusting for sex, top 4 genetic principal components and age, age2, and BMI at the time of BP measurement. p-values are Fisher’s combined p-value across cohorts for the meta-analysis of the association between genomic region and BP. p-values < 0.2 are in bold, indicating associations that were further explored for interactions between the genomic region and each socioeconomic/psychosocial factor. * Indicates that genomic region is significantly associated with FDR q < 0.05.
p-values for significant interactions between psychosocial factors and genomic regions on diastolic blood pressure.
| Ancestry | Psychosocial Factor | Genomic Region | Number of SNPs a | ARIC | HRS | JHS | MESA | Meta-Analysis |
|---|---|---|---|---|---|---|---|---|
| EA | Outward/Trait Anger Score | 365–400 | 0.801 | 0.085 | N/A | 0.0004 | 0.0019 (0.049) | |
| AA | Depressive Symptom Score | 46–84 | 0.006 | 0.162 | 0.550 | 0.031 | 0.0048 (0.048) |
EA = European ancestry; AA = African ancestry. LGEWIS was used to model interactions between socioeconomic/psychosocial factors and genomic regions on SBP or DBP, adjusting for sex, top 4 genetic principal components and age, age2, and body mass index (BMI) at the time of BP measurement. a Range of the number of SNPs included in the genomic region across cohorts. b Fisher’s combined p-value across cohorts for the meta-analysis of the association between the interaction and DBP and corresponding FDR q-value.
Figure 1Interaction between rs147426902 and depressive symptom score on diastolic blood pressure (DBP) in African ancestry cohorts. Average predicted DBP across HRS and JHS African ancestry cohorts for those with the CC genotype at rs147426902 vs. the CT or TT genotype are presented, with depressive symptom scores at the cohort-specific 10th percentile (low depressive symptoms) or the 90th percentile (high depressive symptoms). Black bars indicate 95% confidence intervals for the average predicted DBP estimates. Due to larger sample size in the CC group, confidence intervals for this group are too small to be shown.