Literature DB >> 29251727

Labeling and identifying cell-specific proteomes in the mouse brain.

Toke P Krogager1, Russell J Ernst1, Thomas S Elliott1, Laura Calo2, Václav Beránek1, Ernesto Ciabatti1, Maria Grazia Spillantini2, Marco Tripodi1, Michael H Hastings1, Jason W Chin1.   

Abstract

We develop an approach to tag proteomes synthesized by specific cell types in dissociated cortex, brain slices, and the brains of live mice. By viral-mediated expression of an orthogonal pyrrolysyl-tRNA synthetase-tRNAXXX pair in a cell type of interest and providing a non-canonical amino acid with a chemical handle, we selectively label neuronal or glial proteomes. The method enables the identification of proteins from spatially and genetically defined regions of the brain.

Entities:  

Mesh：

Substances：

Year:  2017        PMID： 29251727      PMCID： PMC6010150          DOI： 10.1038/nbt.4056

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN： 1087-0156            Impact factor:   54.908


  24 in total

1.  Comparative analysis of cleavable azobenzene-based affinity tags for bioorthogonal chemical proteomics.

Authors:  Yu-Ying Yang; Markus Grammel; Anuradha S Raghavan; Guillaume Charron; Howard C Hang
Journal:  Chem Biol       Date:  2010-11-24

Review 2.  Physiology and pharmacology of striatal neurons.

Authors:  Anatol C Kreitzer
Journal:  Annu Rev Neurosci       Date:  2009       Impact factor: 12.449

3.  Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.

Authors:  Da Wei Huang; Brad T Sherman; Richard A Lempicki
Journal:  Nat Protoc       Date:  2009       Impact factor: 13.491

Review 4.  Disentangling neural cell diversity using single-cell transcriptomics.

Authors:  Jean-Francois Poulin; Bosiljka Tasic; Jens Hjerling-Leffler; Jeffrey M Trimarchi; Rajeshwar Awatramani
Journal:  Nat Neurosci       Date:  2016-08-26       Impact factor: 24.884

5.  Human synapsin 1 gene promoter confers highly neuron-specific long-term transgene expression from an adenoviral vector in the adult rat brain depending on the transduced area.

Authors:  S Kügler; E Kilic; M Bähr
Journal:  Gene Ther       Date:  2003-02       Impact factor: 5.250

6.  Genetic code expansion in the mouse brain.

Authors:  Russell J Ernst; Toke P Krogager; Elizabeth S Maywood; Roberto Zanchi; Václav Beránek; Thomas S Elliott; Nicholas P Barry; Michael H Hastings; Jason W Chin
Journal:  Nat Chem Biol       Date:  2016-08-29       Impact factor: 15.040

7.  Determination of glial fibrillary acidic protein (GFAP) in human brain tumors.

Authors:  C M Jacque; C Vinner; M Kujas; M Raoul; J Racadot; N A Baumann
Journal:  J Neurol Sci       Date:  1978-01       Impact factor: 3.181

8.  A robust and high-throughput Cre reporting and characterization system for the whole mouse brain.

Authors:  Linda Madisen; Theresa A Zwingman; Susan M Sunkin; Seung Wook Oh; Hatim A Zariwala; Hong Gu; Lydia L Ng; Richard D Palmiter; Michael J Hawrylycz; Allan R Jones; Ed S Lein; Hongkui Zeng
Journal:  Nat Neurosci       Date:  2009-12-20       Impact factor: 24.884

9.  Glial fibrillary acidic protein (GFAP) in ependymal cells during development. An immunocytochemical study.

Authors:  U Roessmann; M E Velasco; S D Sindely; P Gambetti
Journal:  Brain Res       Date:  1980-10-27       Impact factor: 3.252

Review 10.  Expanding and reprogramming the genetic code.

Authors:  Jason W Chin
Journal:  Nature       Date:  2017-10-04       Impact factor: 49.962
View more
  27 in total

Review 1.  Reprogramming the genetic code.

Authors:  Daniel de la Torre; Jason W Chin
Journal:  Nat Rev Genet       Date:  2020-12-14       Impact factor: 53.242

Review 2.  Advanced imaging and labelling methods to decipher brain cell organization and function.

Authors:  Daniel Choquet; Matthieu Sainlos; Jean-Baptiste Sibarita
Journal:  Nat Rev Neurosci       Date:  2021-03-12       Impact factor: 34.870

3.  Developing bioorthogonal probes to span a spectrum of reactivities.

Authors:  Sean S Nguyen; Jennifer A Prescher
Journal:  Nat Rev Chem       Date:  2020-07-21       Impact factor: 34.035

4.  Making brain proteomics true to type.

Authors:  Rashaun S Wilson; Angus C Nairn
Journal:  Nat Biotechnol       Date:  2018-02-06       Impact factor: 54.908

5.  Engineered triply orthogonal pyrrolysyl-tRNA synthetase/tRNA pairs enable the genetic encoding of three distinct non-canonical amino acids.

Authors:  Daniel L Dunkelmann; Julian C W Willis; Adam T Beattie; Jason W Chin
Journal:  Nat Chem       Date:  2020-05-29       Impact factor: 24.427

Review 6.  Genetic Code Expansion in Animals.

Authors:  Wes Brown; Jihe Liu; Alexander Deiters
Journal:  ACS Chem Biol       Date:  2018-09-05       Impact factor: 5.100

7.  Cyclopropeniminium Ions Exhibit Unique Reactivity Profiles with Bioorthogonal Phosphines.

Authors:  Tyler K Heiss; Jennifer A Prescher
Journal:  J Org Chem       Date:  2019-05-28       Impact factor: 4.354

8.  Dynamics of Non-Canonical Amino Acid-Labeled Intra- and Extracellular Proteins in the Developing Mouse.

Authors:  Aya M Saleh; Kathryn R Jacobson; Tamara L Kinzer-Ursem; Sarah Calve
Journal:  Cell Mol Bioeng       Date:  2019-08-26       Impact factor: 2.321

9.  Multiple Click-Selective tRNA Synthetases Expand Mammalian Cell-Specific Proteomics.

Authors:  Andrew C Yang; Haley du Bois; Niclas Olsson; David Gate; Benoit Lehallier; Daniela Berdnik; Kyle D Brewer; Carolyn R Bertozzi; Joshua E Elias; Tony Wyss-Coray
Journal:  J Am Chem Soc       Date:  2018-05-30       Impact factor: 15.419

10.  A Bump-Hole Strategy for Increased Stringency of Cell-Specific Metabolic Labeling of RNA.

Authors:  Kim Nguyen; Miles Kubota; Jon Del Arco; Chao Feng; Monika Singha; Samantha Beasley; Jasmine Sakr; Sunil P Gandhi; Matthew Blurton-Jones; Jesus Fernández Lucas; Robert C Spitale
Journal:  ACS Chem Biol       Date:  2020-11-21       Impact factor: 5.100
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.