Literature DB >> 29232017

Formation of pH-Resistant Monodispersed Polymer-Lipid Nanodiscs.

Thirupathi Ravula1, Nathaniel Z Hardin1, Sudheer Kumar Ramadugu1, Sarah J Cox1, Ayyalusamy Ramamoorthy1.   

Abstract

Polymer lipid nanodiscs are an invaluable system for structural and functional studies of membrane proteins in their near-native environment. Despite the recent advances in the development and usage of polymer lipid nanodisc systems, lack of control over size and poor tolerance to pH and divalent metal ions are major limitations for further applications. A facile modification of a low-molecular-weight styrene maleic acid copolymer is demonstrated to form monodispersed lipid bilayer nanodiscs that show ultra-stability towards divalent metal ion concentration over a pH range of 2.5 to 10. The macro-nanodiscs (>20 nm diameter) show magnetic alignment properties that can be exploited for high-resolution structural studies of membrane proteins and amyloid proteins using solid-state NMR techniques. The new polymer, SMA-QA, nanodisc is a robust membrane mimetic tool that offers significant advantages over currently reported nanodisc systems.
© 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  lipid bilayers; magnetic alignment; pH tolerance; polymer nanodiscs; styrene maleimide

Year:  2018        PMID: 29232017      PMCID: PMC5837030          DOI: 10.1002/anie.201712017

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  30 in total

1.  Sensitivity and resolution enhancement in solid-state NMR spectroscopy of bicelles.

Authors:  Sergey V Dvinskikh; Kazutoshi Yamamoto; Ulrich H N Dürr; Ayyalusamy Ramamoorthy
Journal:  J Magn Reson       Date:  2006-11-02       Impact factor: 2.229

2.  Bioinspired, Size-Tunable Self-Assembly of Polymer-Lipid Bilayer Nanodiscs.

Authors:  Thirupathi Ravula; Sudheer Kumar Ramadugu; Giacomo Di Mauro; Ayyalusamy Ramamoorthy
Journal:  Angew Chem Int Ed Engl       Date:  2017-08-10       Impact factor: 15.336

Review 3.  Molecular self-assembly and nanochemistry: a chemical strategy for the synthesis of nanostructures.

Authors:  G M Whitesides; J P Mathias; C T Seto
Journal:  Science       Date:  1991-11-29       Impact factor: 47.728

4.  Reconstitution of the Cytb5-CytP450 Complex in Nanodiscs for Structural Studies using NMR Spectroscopy.

Authors:  Meng Zhang; Rui Huang; Rose Ackermann; Sang-Choul Im; Lucy Waskell; Anna Schwendeman; Ayyalusamy Ramamoorthy
Journal:  Angew Chem Int Ed Engl       Date:  2016-02-29       Impact factor: 15.336

5.  Detergent-free isolation, characterization, and functional reconstitution of a tetrameric K+ channel: the power of native nanodiscs.

Authors:  Jonas M Dörr; Martijn C Koorengevel; Marre Schäfer; Alexander V Prokofyev; Stefan Scheidelaar; Elwin A W van der Cruijsen; Timothy R Dafforn; Marc Baldus; J Antoinette Killian
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-15       Impact factor: 11.205

Review 6.  Membrane protein assembly into Nanodiscs.

Authors:  Timothy H Bayburt; Stephen G Sligar
Journal:  FEBS Lett       Date:  2009-10-16       Impact factor: 4.124

7.  The use of SMALPs as a novel membrane protein scaffold for structure study by negative stain electron microscopy.

Authors:  Vincent Postis; Shaun Rawson; Jennifer K Mitchell; Sarah C Lee; Rosemary A Parslow; Tim R Dafforn; Stephen A Baldwin; Stephen P Muench
Journal:  Biochim Biophys Acta       Date:  2014-10-23

8.  Allosteric nanobodies reveal the dynamic range and diverse mechanisms of G-protein-coupled receptor activation.

Authors:  Dean P Staus; Ryan T Strachan; Aashish Manglik; Biswaranjan Pani; Alem W Kahsai; Tae Hun Kim; Laura M Wingler; Seungkirl Ahn; Arnab Chatterjee; Ali Masoudi; Andrew C Kruse; Els Pardon; Jan Steyaert; William I Weis; R Scott Prosser; Brian K Kobilka; Tommaso Costa; Robert J Lefkowitz
Journal:  Nature       Date:  2016-07-13       Impact factor: 49.962

9.  A method for detergent-free isolation of membrane proteins in their local lipid environment.

Authors:  Sarah C Lee; Tim J Knowles; Vincent L G Postis; Mohammed Jamshad; Rosemary A Parslow; Yu-Pin Lin; Adrian Goldman; Pooja Sridhar; Michael Overduin; Stephen P Muench; Timothy R Dafforn
Journal:  Nat Protoc       Date:  2016-06-02       Impact factor: 13.491

10.  TRPV1 structures in nanodiscs reveal mechanisms of ligand and lipid action.

Authors:  Yuan Gao; Erhu Cao; David Julius; Yifan Cheng
Journal:  Nature       Date:  2016-05-18       Impact factor: 49.962

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  36 in total

Review 1.  Impact of membrane curvature on amyloid aggregation.

Authors:  Mayu S Terakawa; Yuxi Lin; Misaki Kinoshita; Shingo Kanemura; Dai Itoh; Toshihiko Sugiki; Masaki Okumura; Ayyalusamy Ramamoorthy; Young-Ho Lee
Journal:  Biochim Biophys Acta Biomembr       Date:  2018-04-28       Impact factor: 3.747

Review 2.  Single-particle cryo-EM studies of transmembrane proteins in SMA copolymer nanodiscs.

Authors:  Chang Sun; Robert B Gennis
Journal:  Chem Phys Lipids       Date:  2019-03-30       Impact factor: 3.329

3.  Effect of polymer charge on functional reconstitution of membrane proteins in polymer nanodiscs.

Authors:  Thirupathi Ravula; Nathaniel Z Hardin; Jia Bai; Sang-Choul Im; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  Chem Commun (Camb)       Date:  2018-08-23       Impact factor: 6.222

Review 4.  Semen-derived amyloidogenic peptides-Key players of HIV infection.

Authors:  Young-Ho Lee; Ayyalusamy Ramamoorthy
Journal:  Protein Sci       Date:  2018-03-14       Impact factor: 6.725

Review 5.  Solution NMR: A powerful tool for structural and functional studies of membrane proteins in reconstituted environments.

Authors:  Robbins Puthenveetil; Olga Vinogradova
Journal:  J Biol Chem       Date:  2019-09-24       Impact factor: 5.157

6.  Natural-abundance 17O NMR spectroscopy of magnetically aligned lipid nanodiscs.

Authors:  Thirupathi Ravula; Bikash R Sahoo; Xiaofeng Dai; Ayyalusamy Ramamoorthy
Journal:  Chem Commun (Camb)       Date:  2020-08-27       Impact factor: 6.222

Review 7.  Use of paramagnetic systems to speed-up NMR data acquisition and for structural and dynamic studies.

Authors:  Vojč Kocman; Giacomo M Di Mauro; Gianluigi Veglia; Ayyalusamy Ramamoorthy
Journal:  Solid State Nucl Magn Reson       Date:  2019-07-12       Impact factor: 2.293

8.  Supramolecular Organization of Apolipoprotein-A-I-Derived Peptides within Disc-like Arrangements.

Authors:  Evgeniy S Salnikov; G M Anantharamaiah; Burkhard Bechinger
Journal:  Biophys J       Date:  2018-07-11       Impact factor: 4.033

9.  Detergent-free extraction, reconstitution and characterization of membrane-anchored cytochrome-b5 in native lipids.

Authors:  Bankala Krishnarjuna; Thirupathi Ravula; Ayyalusamy Ramamoorthy
Journal:  Chem Commun (Camb)       Date:  2020-05-28       Impact factor: 6.222

Review 10.  Polymer nanodiscs: Advantages and limitations.

Authors:  Thirupathi Ravula; Nathaniel Z Hardin; Ayyalusamy Ramamoorthy
Journal:  Chem Phys Lipids       Date:  2019-01-29       Impact factor: 3.329

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