Literature DB >> 17084096

Sensitivity and resolution enhancement in solid-state NMR spectroscopy of bicelles.

Sergey V Dvinskikh1, Kazutoshi Yamamoto, Ulrich H N Dürr, Ayyalusamy Ramamoorthy.   

Abstract

Magnetically aligned bicelles are becoming attractive model membranes to investigate the structure, dynamics, geometry, and interaction of membrane-associated peptides and proteins using solution- and solid-state NMR experiments. Recent studies have shown that bicelles are more suitable than mechanically aligned bilayers for multidimensional solid-state NMR experiments. In this work, we describe experimental aspects of the natural abundance (13)C and (14)N NMR spectroscopy of DMPC/DHPC bicelles. In particular, approaches to enhance the sensitivity and resolution and to quantify radio-frequency heating effects are presented. Sensitivity of (13)C detection using single pulse excitation, conventional cross-polarization (CP), ramp-CP, and NOE techniques are compared. Our results suggest that the proton decoupling efficiency of the FLOPSY pulse sequence is better than that of continuous wave decoupling, TPPM, SPINAL, and WALTZ sequences. A simple method of monitoring the water proton chemical shift is demonstrated for the measurement of sample temperature and calibration of the radio-frequency-induced heating in the sample. The possibility of using (14)N experiments on bicelles is also discussed.

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Year:  2006        PMID: 17084096      PMCID: PMC1861833          DOI: 10.1016/j.jmr.2006.10.004

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  37 in total

1.  Experimental aspects of multidimensional solid-state NMR correlation spectroscopy.

Authors:  A Ramamoorthy; C H Wu; S J Opella
Journal:  J Magn Reson       Date:  1999-09       Impact factor: 2.229

2.  Bicelles: a model membrane system for all seasons?

Authors:  C R Sanders; R S Prosser
Journal:  Structure       Date:  1998-10-15       Impact factor: 5.006

3.  Magnetically aligned phospholipid bilayers with positive ordering: a new model membrane system.

Authors:  R S Prosser; J S Hwang; R R Vold
Journal:  Biophys J       Date:  1998-05       Impact factor: 4.033

4.  SPINAL modulated decoupling in high field double- and triple-resonance solid-state NMR experiments on stationary samples.

Authors:  Neeraj Sinha; Christopher V Grant; Chin H Wu; Anna A De Angelis; Stanley C Howell; Stanley J Opella
Journal:  J Magn Reson       Date:  2005-08-30       Impact factor: 2.229

5.  Nitrogen-14 nuclear magnetic resonance spectroscopy as a probe of lipid bilayer headgroup structure.

Authors:  T M Rothgeb; E Oldfield
Journal:  J Biol Chem       Date:  1981-06-25       Impact factor: 5.157

6.  Molecular insight into the electrostatic membrane surface potential by 14n/31p MAS NMR spectroscopy: nociceptin-lipid association.

Authors:  Fredrick Lindström; Philip T F Williamson; Gerhard Gröbner
Journal:  J Am Chem Soc       Date:  2005-05-11       Impact factor: 15.419

7.  Magnetically orientable phospholipid bilayers containing small amounts of a bile salt analogue, CHAPSO.

Authors:  C R Sanders; J H Prestegard
Journal:  Biophys J       Date:  1990-08       Impact factor: 4.033

8.  Reduction of RF-induced sample heating with a scroll coil resonator structure for solid-state NMR probes.

Authors:  John A Stringer; Charles E Bronnimann; Charles G Mullen; Donghua H Zhou; Sara A Stellfox; Ying Li; Evan H Williams; Chad M Rienstra
Journal:  J Magn Reson       Date:  2005-03       Impact factor: 2.229

9.  Two-dimensional chemical shift/heteronuclear dipolar coupling spectra obtained with polarization inversion spin exchange at the magic angle and magic-angle sample spinning (PISEMAMAS).

Authors:  A Ramamoorthy; S J Opella
Journal:  Solid State Nucl Magn Reson       Date:  1995-08       Impact factor: 2.293

10.  Melittin-induced changes in lipid multilayers. A solid-state NMR study.

Authors:  R Smith; F Separovic; F C Bennett; B A Cornell
Journal:  Biophys J       Date:  1992-08       Impact factor: 4.033

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  13 in total

1.  Bicelle-enabled structural studies on a membrane-associated cytochrome B5 by solid-state MAS NMR spectroscopy.

Authors:  Jiadi Xu; Ulrich H N Dürr; Sang-Choul Im; Zhehong Gan; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

2.  Improving the quality of oriented membrane protein spectra using heat-compensated separated local field experiments.

Authors:  Songlin Wang; T Gopinath; Gianluigi Veglia
Journal:  J Biomol NMR       Date:  2019-08-28       Impact factor: 2.835

3.  Use of a copper-chelated lipid speeds up NMR measurements from membrane proteins.

Authors:  Kazutoshi Yamamoto; Jiadi Xu; Karen E Kawulka; John C Vederas; Ayyalusamy Ramamoorthy
Journal:  J Am Chem Soc       Date:  2010-05-26       Impact factor: 15.419

4.  Formation of pH-Resistant Monodispersed Polymer-Lipid Nanodiscs.

Authors:  Thirupathi Ravula; Nathaniel Z Hardin; Sudheer Kumar Ramadugu; Sarah J Cox; Ayyalusamy Ramamoorthy
Journal:  Angew Chem Int Ed Engl       Date:  2018-01-08       Impact factor: 15.336

5.  Induction of negative curvature as a mechanism of cell toxicity by amyloidogenic peptides: the case of islet amyloid polypeptide.

Authors:  Pieter E S Smith; Jeffrey R Brender; Ayyalusamy Ramamoorthy
Journal:  J Am Chem Soc       Date:  2009-04-01       Impact factor: 15.419

6.  Comprehensive analysis of lipid dynamics variation with lipid composition and hydration of bicelles using nuclear magnetic resonance (NMR) spectroscopy.

Authors:  Kazutoshi Yamamoto; Ronald Soong; Ayyalusamy Ramamoorthy
Journal:  Langmuir       Date:  2009-06-16       Impact factor: 3.882

7.  A low-E magic angle spinning probe for biological solid state NMR at 750 MHz.

Authors:  Seth A McNeill; Peter L Gor'kov; Kiran Shetty; William W Brey; Joanna R Long
Journal:  J Magn Reson       Date:  2008-12-14       Impact factor: 2.229

8.  High-resolution 1H MAS RFDR NMR of biological membranes.

Authors:  Darryl Aucoin; Devin Camenares; Xin Zhao; Jay Jung; Takeshi Sato; Steven O Smith
Journal:  J Magn Reson       Date:  2008-12-14       Impact factor: 2.229

Review 9.  Sensitivity and resolution enhancement of oriented solid-state NMR: application to membrane proteins.

Authors:  T Gopinath; Kaustubh R Mote; Gianluigi Veglia
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2013-08-12       Impact factor: 9.795

Review 10.  When detergent meets bilayer: birth and coming of age of lipid bicelles.

Authors:  Ulrich H N Dürr; Ronald Soong; Ayyalusamy Ramamoorthy
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2013-01-23       Impact factor: 9.795

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