Literature DB >> 29026678

Statistical model for OCT image denoising.

Muxingzi Li1, Ramzi Idoughi1, Biswarup Choudhury1, Wolfgang Heidrich1.   

Abstract

Optical coherence tomography (OCT) is a non-invasive technique with a large array of applications in clinical imaging and biological tissue visualization. However, the presence of speckle noise affects the analysis of OCT images and their diagnostic utility. In this article, we introduce a new OCT denoising algorithm. The proposed method is founded on a numerical optimization framework based on maximum-a-posteriori estimate of the noise-free OCT image. It combines a novel speckle noise model, derived from local statistics of empirical spectral domain OCT (SD-OCT) data, with a Huber variant of total variation regularization for edge preservation. The proposed approach exhibits satisfying results in terms of speckle noise reduction as well as edge preservation, at reduced computational cost.

Keywords:  (030.4280) Noise in imaging systems; (030.6140) Speckle; (030.6600) Statistical optics; (100.2980) Image enhancement; (110.4500) Optical coherence tomography

Year:  2017        PMID: 29026678      PMCID: PMC5611912          DOI: 10.1364/BOE.8.003903

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  20 in total

1.  General Bayesian estimation for speckle noise reduction in optical coherence tomography retinal imagery.

Authors:  Alexander Wong; Akshaya Mishra; Kostadinka Bizheva; David A Clausi
Journal:  Opt Express       Date:  2010-04-12       Impact factor: 3.894

2.  Speckle noise reduction algorithm with total variation regularization in optical coherence tomography.

Authors:  Guanghua Gong; Hongming Zhang; Minyu Yao
Journal:  Opt Express       Date:  2015-09-21       Impact factor: 3.894

3.  Comparison of PDE-based nonlinear diffusion approaches for image enhancement and denoising in optical coherence tomography.

Authors:  Harry M Salinas; Delia Cabrera Fernández
Journal:  IEEE Trans Med Imaging       Date:  2007-06       Impact factor: 10.048

4.  Speckle reduction in optical coherence tomography images using digital filtering.

Authors:  Aydogan Ozcan; Alberto Bilenca; Adrien E Desjardins; Brett E Bouma; Guillermo J Tearney
Journal:  J Opt Soc Am A Opt Image Sci Vis       Date:  2007-07       Impact factor: 2.129

5.  Stochastic speckle noise compensation in optical coherence tomography using non-stationary spline-based speckle noise modelling.

Authors:  Andrew Cameron; Dorothy Lui; Ameneh Boroomand; Jeffrey Glaister; Alexander Wong; Kostadinka Bizheva
Journal:  Biomed Opt Express       Date:  2013-08-28       Impact factor: 3.732

6.  Angle-resolved optical coherence tomography with sequential angular selectivity for speckle reduction.

Authors:  A E Desjardins; B J Vakoc; W Y Oh; S M Motaghiannezam; G J Tearney; B E Bouma
Journal:  Opt Express       Date:  2007-05-14       Impact factor: 3.894

7.  Speckle noise reduction algorithm for optical coherence tomography based on interval type II fuzzy set.

Authors:  Prabakar Puvanathasan; Kostadinka Bizheva
Journal:  Opt Express       Date:  2007-11-26       Impact factor: 3.894

8.  Segmentation Based Sparse Reconstruction of Optical Coherence Tomography Images.

Authors:  Leyuan Fang; Shutao Li; David Cunefare; Sina Farsiu
Journal:  IEEE Trans Med Imaging       Date:  2016-09-20       Impact factor: 10.048

9.  Automatic segmentation of seven retinal layers in SDOCT images congruent with expert manual segmentation.

Authors:  Stephanie J Chiu; Xiao T Li; Peter Nicholas; Cynthia A Toth; Joseph A Izatt; Sina Farsiu
Journal:  Opt Express       Date:  2010-08-30       Impact factor: 3.894

10.  Wavelet denoising of multiframe optical coherence tomography data.

Authors:  Markus A Mayer; Anja Borsdorf; Martin Wagner; Joachim Hornegger; Christian Y Mardin; Ralf P Tornow
Journal:  Biomed Opt Express       Date:  2012-02-22       Impact factor: 3.732

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  8 in total

1.  Speckle noise reduction in optical coherence tomography images based on edge-sensitive cGAN.

Authors:  Yuhui Ma; Xinjian Chen; Weifang Zhu; Xuena Cheng; Dehui Xiang; Fei Shi
Journal:  Biomed Opt Express       Date:  2018-10-02       Impact factor: 3.732

2.  Analysis and evaluation of BC-mode OCT image visualization for microsurgery guidance.

Authors:  Shuwen Wei; Shoujing Guo; Jin U Kang
Journal:  Biomed Opt Express       Date:  2019-09-19       Impact factor: 3.732

3.  Developing a New Dimension for Fourier Domain Optical Coherence Tomography Images by Simultaneous Measurement of the Refractive Index and Thickness.

Authors:  Ahmad Amjadi; Hamed Ghodsi; Salile Khandani; Bahareh Khishkhah; Payman Rajai; Mohammadreza Razzaghi
Journal:  J Lasers Med Sci       Date:  2021-12-29

4.  Retinal OCT Denoising with Pseudo-Multimodal Fusion Network.

Authors:  Dewei Hu; Joseph D Malone; Yigit Atay; Yuankai K Tao; Ipek Oguz
Journal:  Ophthalmic Med Image Anal (2020)       Date:  2020-11-20

5.  LIFE: A Generalizable Autodidactic Pipeline for 3D OCT-A Vessel Segmentation.

Authors:  Dewei Hu; Can Cui; Hao Li; Kathleen E Larson; Yuankai K Tao; Ipek Oguz
Journal:  Med Image Comput Comput Assist Interv       Date:  2021-09-21

6.  A Deep Learning Approach to Denoise Optical Coherence Tomography Images of the Optic Nerve Head.

Authors:  Sripad Krishna Devalla; Giridhar Subramanian; Tan Hung Pham; Xiaofei Wang; Shamira Perera; Tin A Tun; Tin Aung; Leopold Schmetterer; Alexandre H Thiéry; Michaël J A Girard
Journal:  Sci Rep       Date:  2019-10-08       Impact factor: 4.379

7.  Automatically Enhanced OCT Scans of the Retina: A proof of concept study.

Authors:  Sandro De Zanet; Marion R Munk; Stefanos Apostolopoulos; Jazmín Salas; José L P Ordóñez; Shern Shiou Tan; Carlos Ciller; Andreas Ebneter; Martin Zinkernagel; Raphael Sznitman; Sebastian Wolf
Journal:  Sci Rep       Date:  2020-05-08       Impact factor: 4.379

8.  Spatial-Temporal Speckle Variance in the En-Face View as a Contrast for Optical Coherence Tomography Angiography (OCTA).

Authors:  Jonathan D Luisi; Jonathan L Lin; Bill T Ameredes; Massoud Motamedi
Journal:  Sensors (Basel)       Date:  2022-03-22       Impact factor: 3.576

  8 in total

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