Literature DB >> 28959059

Comparative Dynamics of Methionine Side-Chain in FMOC-Methionine and in Amyloid Fibrils.

Liliya Vugmeyster1, Dmitry Ostrovsky2.   

Abstract

We compared the dynamics of key methionine methyl groups in the water-accessible hydrophobic cavity of amyloid fibrils and Fluorenylmethyloxycarbonyl-Methionine (FMOC-Met), which renders general hydrophobicity to the environment without the complexity of the protein. Met35 in the hydrated cavity was recently found to undergo a dynamical cross-over from the dominance of methyl rotations at low temperatures to the dominance of diffusive motion of methyl axis at high temperatures. Current results indicate that in FMOC-Met this cross-over is suppressed, similar to what was observed for the dry fibrils, indicating that hydration of the cavity is driving the onset of the dynamical transition.

Entities:  

Keywords:  deuterium NMR; methionine; methyl group dynamics; relaxation times; solids-state NMR

Year:  2017        PMID: 28959059      PMCID: PMC5612497          DOI: 10.1016/j.cplett.2017.02.021

Source DB:  PubMed          Journal:  Chem Phys Lett        ISSN: 0009-2614            Impact factor:   2.328


  24 in total

1.  Microscopic origins of entropy, heat capacity and the glass transition in proteins.

Authors:  A L Lee; A J Wand
Journal:  Nature       Date:  2001-05-24       Impact factor: 49.962

2.  A thermometer for nonspinning solid-state NMR spectroscopy

Authors: 
Journal:  J Magn Reson       Date:  2000-10       Impact factor: 2.229

Review 3.  The 'glass transition' in protein dynamics: what it is, why it occurs, and how to exploit it.

Authors:  Dagmar Ringe; Gregory A Petsko
Journal:  Biophys Chem       Date:  2003-09       Impact factor: 2.352

4.  Methyl rotation barriers in proteins from 2H relaxation data. Implications for protein structure.

Authors:  Yi Xue; Maria S Pavlova; Yaroslav E Ryabov; Bernd Reif; Nikolai R Skrynnikov
Journal:  J Am Chem Soc       Date:  2007-05-08       Impact factor: 15.419

5.  The dynamical transition of proteins, concepts and misconceptions.

Authors:  Wolfgang Doster
Journal:  Eur Biophys J       Date:  2008-02-13       Impact factor: 1.733

Review 6.  Observing biological dynamics at atomic resolution using NMR.

Authors:  Anthony K Mittermaier; Lewis E Kay
Journal:  Trends Biochem Sci       Date:  2009-10-19       Impact factor: 13.807

7.  Temperature-dependent dynamical transitions of different classes of amino acid residue in a globular protein.

Authors:  Yinglong Miao; Zheng Yi; Dennis C Glass; Liang Hong; Madhusudan Tyagi; Jerome Baudry; Nitin Jain; Jeremy C Smith
Journal:  J Am Chem Soc       Date:  2012-11-20       Impact factor: 15.419

8.  Methyl group rotation, 1H spin-lattice relaxation in an organic solid, and the analysis of nonexponential relaxation.

Authors:  Peter A Beckmann; Evan Schneider
Journal:  J Chem Phys       Date:  2012-02-07       Impact factor: 3.488

9.  Dynamics of Hydrophobic Core Phenylalanine Residues Probed by Solid-State Deuteron NMR.

Authors:  Liliya Vugmeyster; Dmitry Ostrovsky; Toni Villafranca; Janelle Sharp; Wei Xu; Andrew S Lipton; Gina L Hoatson; Robert L Vold
Journal:  J Phys Chem B       Date:  2015-11-12       Impact factor: 2.991

10.  Glassy dynamics of protein methyl groups revealed by deuteron NMR.

Authors:  Liliya Vugmeyster; Dmitry Ostrovsky; Kirsten Penland; Gina L Hoatson; Robert L Vold
Journal:  J Phys Chem B       Date:  2013-01-22       Impact factor: 2.991

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  3 in total

1.  Solvent-Driven Dynamical Crossover in the Phenylalanine Side-Chain from the Hydrophobic Core of Amyloid Fibrils Detected by 2H NMR Relaxation.

Authors:  Liliya Vugmeyster; Dmitry Ostrovsky; Gina L Hoatson; Wei Qiang; Isaac B Falconer
Journal:  J Phys Chem B       Date:  2017-07-21       Impact factor: 2.991

2.  Dynamics of Serine-8 Side-Chain in Amyloid-β Fibrils and Fluorenylmethyloxycarbonyl Serine Amino Acid, Investigated by Solid-State Deuteron NMR.

Authors:  Liliya Vugmeyster; Dan Fai Au; Dmitry Ostrovsky; Dillon Ray Lee Rickertsen; Scott M Reed
Journal:  J Phys Chem B       Date:  2020-05-27       Impact factor: 2.991

3.  Subtle chemical modification for enrichment of Fmoc-amino acid at a phospholipid interface.

Authors:  Pablo G Argudo; Rafael Contreras-Montoya; Luis Álvarez de Cienfuegos; María T Martín-Romero; Luis Camacho; Juan J Giner-Casares
Journal:  RSC Adv       Date:  2019-11-14       Impact factor: 3.361

  3 in total

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