Literature DB >> 14499926

The 'glass transition' in protein dynamics: what it is, why it occurs, and how to exploit it.

Dagmar Ringe1, Gregory A Petsko.   

Abstract

All proteins undergo a dramatic change in their dynamical properties at approximately 200 K. Above this temperature, their dynamic behavior is dominated by large-scale collective motions of bonded and nonbonded groups of atoms. At lower temperatures, simple harmonic vibrations predominate. The transition has been described as a 'glass transition' to emphasize certain similarities between the change in dynamic behavior of individual protein molecules and the changes in viscosity and other properties of liquids when they form a glass. The glass transition may reflect the intrinsic temperature dependence of the motions of atoms in the protein itself, in the bound solvent on the surface of the protein, or it may reflect contributions from both. Protein function is significantly altered below this transition temperature; a fact that can be exploited to trap normally unstable intermediates in enzyme-catalyzed reactions and stabilize them for periods long enough to permit their characterization by high-resolution protein crystallography.

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Year:  2003        PMID: 14499926     DOI: 10.1016/s0301-4622(03)00096-6

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  54 in total

1.  Biomolecular cryocrystallography: structural changes during flash-cooling.

Authors:  Bertil Halle
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-29       Impact factor: 11.205

2.  Dynamical transition and proteinquake in photoactive yellow protein.

Authors:  Kazuhito Itoh; Masaki Sasai
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-04       Impact factor: 11.205

3.  Protein dynamical transition at 110 K.

Authors:  Chae Un Kim; Mark W Tate; Sol M Gruner
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-13       Impact factor: 11.205

4.  Resolution and Characterization of Chemical Steps in Enzyme Catalytic Sequences by Using Low-Temperature and Time-Resolved, Full-Spectrum EPR Spectroscopy in Fluid Cryosolvent and Frozen Solution Systems.

Authors:  Miao Wang; Chen Zhu; Meghan Kohne; Kurt Warncke
Journal:  Methods Enzymol       Date:  2015-09-14       Impact factor: 1.600

5.  Effects of pressure on the dynamics of an oligomeric protein from deep-sea hyperthermophile.

Authors:  Utsab R Shrestha; Debsindhu Bhowmik; John R D Copley; Madhusudan Tyagi; Juscelino B Leão; Xiang-qiang Chu
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-26       Impact factor: 11.205

6.  Glass-to-cryogenic-liquid transitions in aqueous solutions suggested by crack healing.

Authors:  Chae Un Kim; Mark W Tate; Sol M Gruner
Journal:  Proc Natl Acad Sci U S A       Date:  2015-09-08       Impact factor: 11.205

7.  Coupling between catalytic site and collective dynamics: a requirement for mechanochemical activity of enzymes.

Authors:  Lee-Wei Yang; Ivet Bahar
Journal:  Structure       Date:  2005-06       Impact factor: 5.006

8.  Low-temperature glass transitions of quenched and annealed bovine serum albumin aqueous solutions.

Authors:  Kiyoshi Kawai; Toru Suzuki; Masaharu Oguni
Journal:  Biophys J       Date:  2006-02-24       Impact factor: 4.033

9.  Controlling the protein dynamical transition with sugar-based bioprotectant matrices: a neutron scattering study.

Authors:  E Cornicchi; M Marconi; G Onori; A Paciaroni
Journal:  Biophys J       Date:  2006-04-14       Impact factor: 4.033

10.  Void distributions reveal structural link between jammed packings and protein cores.

Authors:  John D Treado; Zhe Mei; Lynne Regan; Corey S O'Hern
Journal:  Phys Rev E       Date:  2019-02       Impact factor: 2.529

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