Literature DB >> 28668116

MacroBac: New Technologies for Robust and Efficient Large-Scale Production of Recombinant Multiprotein Complexes.

Scott D Gradia1, Justin P Ishida2, Miaw-Sheue Tsai3, Chris Jeans1, John A Tainer4, Jill O Fuss5.   

Abstract

Recombinant expression of large, multiprotein complexes is essential and often rate limiting for determining structural, biophysical, and biochemical properties of DNA repair, replication, transcription, and other key cellular processes. Baculovirus-infected insect cell expression systems are especially well suited for producing large, human proteins recombinantly, and multigene baculovirus systems have facilitated studies of multiprotein complexes. In this chapter, we describe a multigene baculovirus system called MacroBac that uses a Biobricks-type assembly method based on restriction and ligation (Series 11) or ligation-independent cloning (Series 438). MacroBac cloning and assembly is efficient and equally well suited for either single subcloning reactions or high-throughput cloning using 96-well plates and liquid handling robotics. MacroBac vectors are polypromoter with each gene flanked by a strong polyhedrin promoter and an SV40 poly(A) termination signal that minimize gene order expression level effects seen in many polycistronic assemblies. Large assemblies are robustly achievable, and we have successfully assembled as many as 10 genes into a single MacroBac vector. Importantly, we have observed significant increases in expression levels and quality of large, multiprotein complexes using a single, multigene, polypromoter virus rather than coinfection with multiple, single-gene viruses. Given the importance of characterizing functional complexes, we believe that MacroBac provides a critical enabling technology that may change the way that structural, biophysical, and biochemical research is done.
© 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Baculovirus; Biobricks; Insect cells; LIC; MacroBac; Multigene; Protein complex; Recombinant protein expression

Mesh:

Substances:

Year:  2017        PMID: 28668116      PMCID: PMC6028233          DOI: 10.1016/bs.mie.2017.03.008

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  21 in total

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Journal:  Nucleic Acids Res       Date:  1990-10-25       Impact factor: 16.971

2.  The titerless infected-cells preservation and scale-up (TIPS) method for large-scale production of NO-sensitive human soluble guanylate cyclase (sGC) from insect cells infected with recombinant baculovirus.

Authors:  David J Wasilko; S Edward Lee; Kim J Stutzman-Engwall; Beverly A Reitz; Thomas L Emmons; Karl J Mathis; Michael J Bienkowski; Alfredo G Tomasselli; H David Fischer
Journal:  Protein Expr Purif       Date:  2009-01-11       Impact factor: 1.650

3.  OmniBac: universal multigene transfer plasmids for baculovirus expression vector systems.

Authors:  Deepak B Thimiri Govinda Raj; Lakshmi S Vijayachandran; Imre Berger
Journal:  Methods Mol Biol       Date:  2014

Review 4.  Structural insights into NHEJ: building up an integrated picture of the dynamic DSB repair super complex, one component and interaction at a time.

Authors:  Gareth J Williams; Michal Hammel; Sarvan Kumar Radhakrishnan; Dale Ramsden; Susan P Lees-Miller; John A Tainer
Journal:  DNA Repair (Amst)       Date:  2014-03-20

Review 5.  XPB and XPD helicases in TFIIH orchestrate DNA duplex opening and damage verification to coordinate repair with transcription and cell cycle via CAK kinase.

Authors:  Jill O Fuss; John A Tainer
Journal:  DNA Repair (Amst)       Date:  2011-05-14

6.  Comprehensive macromolecular conformations mapped by quantitative SAXS analyses.

Authors:  Greg L Hura; Helen Budworth; Kevin N Dyer; Robert P Rambo; Michal Hammel; Cynthia T McMurray; John A Tainer
Journal:  Nat Methods       Date:  2013-06       Impact factor: 28.547

Review 7.  Envisioning the dynamics and flexibility of Mre11-Rad50-Nbs1 complex to decipher its roles in DNA replication and repair.

Authors:  Julien Lafrance-Vanasse; Gareth J Williams; John A Tainer
Journal:  Prog Biophys Mol Biol       Date:  2015-01-07       Impact factor: 3.667

8.  Production of human beta interferon in insect cells infected with a baculovirus expression vector.

Authors:  G E Smith; M D Summers; M J Fraser
Journal:  Mol Cell Biol       Date:  1983-12       Impact factor: 4.272

9.  biGBac enables rapid gene assembly for the expression of large multisubunit protein complexes.

Authors:  Florian Weissmann; Georg Petzold; Ryan VanderLinden; Pim J Huis In 't Veld; Nicholas G Brown; Fabienne Lampert; Stefan Westermann; Holger Stark; Brenda A Schulman; Jan-Michael Peters
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-25       Impact factor: 11.205

Review 10.  Robots, pipelines, polyproteins: enabling multiprotein expression in prokaryotic and eukaryotic cells.

Authors:  Lakshmi Sumitra Vijayachandran; Cristina Viola; Frederic Garzoni; Simon Trowitzsch; Christoph Bieniossek; Maxime Chaillet; Christiane Schaffitzel; Didier Busso; Christophe Romier; Arnaud Poterszman; Timothy J Richmond; Imre Berger
Journal:  J Struct Biol       Date:  2011-03-17       Impact factor: 2.867

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  28 in total

Review 1.  The MRE11-RAD50-NBS1 Complex Conducts the Orchestration of Damage Signaling and Outcomes to Stress in DNA Replication and Repair.

Authors:  Aleem Syed; John A Tainer
Journal:  Annu Rev Biochem       Date:  2018-04-25       Impact factor: 23.643

2.  A DNA nick at Ku-blocked double-strand break ends serves as an entry site for exonuclease 1 (Exo1) or Sgs1-Dna2 in long-range DNA end resection.

Authors:  Weibin Wang; James M Daley; Youngho Kwon; Xiaoyu Xue; Danielle S Krasner; Adam S Miller; Kevin A Nguyen; Elizabeth A Williamson; Eun Yong Shim; Sang Eun Lee; Robert Hromas; Patrick Sung
Journal:  J Biol Chem       Date:  2018-09-17       Impact factor: 5.157

3.  Targeting Allostery with Avatars to Design Inhibitors Assessed by Cell Activity: Dissecting MRE11 Endo- and Exonuclease Activities.

Authors:  Davide Moiani; Daryl A Ronato; Chris A Brosey; Andrew S Arvai; Aleem Syed; Jean-Yves Masson; Elena Petricci; John A Tainer
Journal:  Methods Enzymol       Date:  2018-02-22       Impact factor: 1.600

4.  Structure of the human Mediator-RNA polymerase II pre-initiation complex.

Authors:  Srinivasan Rengachari; Sandra Schilbach; Shintaro Aibara; Christian Dienemann; Patrick Cramer
Journal:  Nature       Date:  2021-04-26       Impact factor: 49.962

5.  Structures of mammalian RNA polymerase II pre-initiation complexes.

Authors:  Shintaro Aibara; Sandra Schilbach; Patrick Cramer
Journal:  Nature       Date:  2021-04-26       Impact factor: 49.962

6.  Structural basis of AAUAAA polyadenylation signal recognition by the human CPSF complex.

Authors:  Marcello Clerici; Marco Faini; Lena M Muckenfuss; Ruedi Aebersold; Martin Jinek
Journal:  Nat Struct Mol Biol       Date:  2018-01-22       Impact factor: 15.369

7.  Enhancement of BLM-DNA2-Mediated Long-Range DNA End Resection by CtIP.

Authors:  James M Daley; Judit Jimenez-Sainz; Weibin Wang; Adam S Miller; Xiaoyu Xue; Kevin A Nguyen; Ryan B Jensen; Patrick Sung
Journal:  Cell Rep       Date:  2017-10-10       Impact factor: 9.423

8.  Robust Production, Crystallization, Structure Determination, and Analysis of [Fe-S] Proteins: Uncovering Control of Electron Shuttling and Gating in the Respiratory Metabolism of Molybdopterin Guanine Dinucleotide Enzymes.

Authors:  Chi-Lin Tsai; John A Tainer
Journal:  Methods Enzymol       Date:  2017-12-19       Impact factor: 1.600

9.  JARID2 and AEBP2 regulate PRC2 in the presence of H2AK119ub1 and other histone modifications.

Authors:  Vignesh Kasinath; Curtis Beck; Paul Sauer; Simon Poepsel; Jennifer Kosmatka; Marco Faini; Daniel Toso; Ruedi Aebersold; Eva Nogales
Journal:  Science       Date:  2021-01-22       Impact factor: 47.728

10.  The Cdk8 kinase module regulates interaction of the Mediator complex with RNA polymerase II.

Authors:  Sara Osman; Eusra Mohammad; Michael Lidschreiber; Alexandra Stuetzer; Fanni Laura Bazsó; Kerstin C Maier; Henning Urlaub; Patrick Cramer
Journal:  J Biol Chem       Date:  2021-04-29       Impact factor: 5.157

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