Literature DB >> 27114506

biGBac enables rapid gene assembly for the expression of large multisubunit protein complexes.

Florian Weissmann1, Georg Petzold1, Ryan VanderLinden2, Pim J Huis In 't Veld1, Nicholas G Brown3, Fabienne Lampert1, Stefan Westermann1, Holger Stark4, Brenda A Schulman5, Jan-Michael Peters6.   

Abstract

Analyses of protein complexes are facilitated by methods that enable the generation of recombinant complexes via coexpression of their subunits from multigene DNA constructs. However, low experimental throughput limits the generation of such constructs in parallel. Here we describe a method that allows up to 25 cDNAs to be assembled into a single baculoviral expression vector in only two steps. This method, called biGBac, uses computationally optimized DNA linker sequences that enable the efficient assembly of linear DNA fragments, using reactions developed by Gibson for the generation of synthetic genomes. The biGBac method uses a flexible and modular "mix and match" approach and enables the generation of baculoviruses from DNA constructs at any assembly stage. Importantly, it is simple, efficient, and fast enough to allow the manual generation of many multigene expression constructs in parallel. We have used this method to generate and characterize recombinant forms of the anaphase-promoting complex/cyclosome, cohesin, and kinetochore complexes.

Entities:  

Keywords:  Gibson assembly; baculovirus-insect cell expression; protein complexes

Mesh:

Substances:

Year:  2016        PMID: 27114506      PMCID: PMC4868461          DOI: 10.1073/pnas.1604935113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  37 in total

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Authors:  Claudine Kraft; Hartmut C Vodermaier; Sebastian Maurer-Stroh; Frank Eisenhaber; Jan-Michael Peters
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Journal:  Mol Cell       Date:  2005-12-22       Impact factor: 17.970

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Authors:  Iain M Cheeseman; Joshua S Chappie; Elizabeth M Wilson-Kubalek; Arshad Desai
Journal:  Cell       Date:  2006-12-01       Impact factor: 41.582

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Authors:  Arsen Petrovic; Shyamal Mosalaganti; Jenny Keller; Marta Mattiuzzo; Katharina Overlack; Veronica Krenn; Anna De Antoni; Sabine Wohlgemuth; Valentina Cecatiello; Sebastiano Pasqualato; Stefan Raunser; Andrea Musacchio
Journal:  Mol Cell       Date:  2014-02-13       Impact factor: 17.970

6.  Efficient generation of infectious recombinant baculoviruses by site-specific transposon-mediated insertion of foreign genes into a baculovirus genome propagated in Escherichia coli.

Authors:  V A Luckow; S C Lee; G F Barry; P O Olins
Journal:  J Virol       Date:  1993-08       Impact factor: 5.103

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Journal:  J Struct Biol       Date:  2011-03-17       Impact factor: 2.867

9.  Mechanism of polyubiquitination by human anaphase-promoting complex: RING repurposing for ubiquitin chain assembly.

Authors:  Nicholas G Brown; Edmond R Watson; Florian Weissmann; Marc A Jarvis; Ryan VanderLinden; Christy R R Grace; Jeremiah J Frye; Renping Qiao; Prakash Dube; Georg Petzold; Shein Ei Cho; Omar Alsharif; Ju Bao; Iain F Davidson; Jie J Zheng; Amanda Nourse; Igor Kurinov; Jan-Michael Peters; Holger Stark; Brenda A Schulman
Journal:  Mol Cell       Date:  2014-10-09       Impact factor: 17.970

10.  Electron microscopy structure of human APC/C(CDH1)-EMI1 reveals multimodal mechanism of E3 ligase shutdown.

Authors:  Jeremiah J Frye; Nicholas G Brown; Georg Petzold; Edmond R Watson; Christy R R Grace; Amanda Nourse; Marc A Jarvis; Richard W Kriwacki; Jan-Michael Peters; Holger Stark; Brenda A Schulman
Journal:  Nat Struct Mol Biol       Date:  2013-05-26       Impact factor: 15.369

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  95 in total

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Journal:  Elife       Date:  2019-07-31       Impact factor: 8.140

2.  The COMA complex interacts with Cse4 and positions Sli15/Ipl1 at the budding yeast inner kinetochore.

Authors:  Josef Fischböck-Halwachs; Sylvia Singh; Mia Potocnjak; Götz Hagemann; Victor Solis-Mezarino; Stephan Woike; Medini Ghodgaonkar-Steger; Florian Weissmann; Laura D Gallego; Julie Rojas; Jessica Andreani; Alwin Köhler; Franz Herzog
Journal:  Elife       Date:  2019-05-21       Impact factor: 8.140

3.  MacroBac: New Technologies for Robust and Efficient Large-Scale Production of Recombinant Multiprotein Complexes.

Authors:  Scott D Gradia; Justin P Ishida; Miaw-Sheue Tsai; Chris Jeans; John A Tainer; Jill O Fuss
Journal:  Methods Enzymol       Date:  2017-05-15       Impact factor: 1.600

4.  Mechanism of APC/CCDC20 activation by mitotic phosphorylation.

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Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-25       Impact factor: 11.205

5.  Structural and mechanistic basis of the EMC-dependent biogenesis of distinct transmembrane clients.

Authors:  Lakshmi E Miller-Vedam; Bastian Bräuning; Katerina D Popova; Nicole T Schirle Oakdale; Jessica L Bonnar; Jesuraj R Prabu; Elizabeth A Boydston; Natalia Sevillano; Matthew J Shurtleff; Robert M Stroud; Charles S Craik; Brenda A Schulman; Adam Frost; Jonathan S Weissman
Journal:  Elife       Date:  2020-11-25       Impact factor: 8.140

6.  Pac1/LIS1 stabilizes an uninhibited conformation of dynein to coordinate its localization and activity.

Authors:  Matthew G Marzo; Jacqueline M Griswold; Steven M Markus
Journal:  Nat Cell Biol       Date:  2020-04-27       Impact factor: 28.824

7.  Structural insights into the regulation of human serine palmitoyltransferase complexes.

Authors:  Yingdi Wang; Yiming Niu; Zhe Zhang; Kenneth Gable; Sita D Gupta; Niranjanakumari Somashekarappa; Gongshe Han; Hongtu Zhao; Alexander G Myasnikov; Ravi C Kalathur; Teresa M Dunn; Chia-Hsueh Lee
Journal:  Nat Struct Mol Biol       Date:  2021-02-08       Impact factor: 15.369

8.  Structure of the human Mediator-RNA polymerase II pre-initiation complex.

Authors:  Srinivasan Rengachari; Sandra Schilbach; Shintaro Aibara; Christian Dienemann; Patrick Cramer
Journal:  Nature       Date:  2021-04-26       Impact factor: 49.962

9.  Activation mechanism of a human SK-calmodulin channel complex elucidated by cryo-EM structures.

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Journal:  Science       Date:  2018-05-04       Impact factor: 47.728

10.  Human cohesin compacts DNA by loop extrusion.

Authors:  Yoori Kim; Zhubing Shi; Hongshan Zhang; Ilya J Finkelstein; Hongtao Yu
Journal:  Science       Date:  2019-11-28       Impact factor: 47.728

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