Literature DB >> 28630595

QSAR models of human data can enrich or replace LLNA testing for human skin sensitization.

Vinicius M Alves1,2, Stephen J Capuzzi1, Eugene Muratov1,3, Rodolpho C Braga2, Thomas Thornton1, Denis Fourches4, Judy Strickland5, Nicole Kleinstreuer6, Carolina H Andrade2, Alexander Tropsha1.   

Abstract

Skin sensitization is a major environmental and occupational health hazard. Although many chemicals have been evaluated in humans, there have been no efforts to model these data to date. We have compiled, curated, analyzed, and compared the available human and LLNA data. Using these data, we have developed reliable computational models and applied them for virtual screening of chemical libraries to identify putative skin sensitizers. The overall concordance between murine LLNA and human skin sensitization responses for a set of 135 unique chemicals was low (R = 28-43%), although several chemical classes had high concordance. We have succeeded to develop predictive QSAR models of all available human data with the external correct classification rate of 71%. A consensus model integrating concordant QSAR predictions and LLNA results afforded a higher CCR of 82% but at the expense of the reduced external dataset coverage (52%). We used the developed QSAR models for virtual screening of CosIng database and identified 1061 putative skin sensitizers; for seventeen of these compounds, we found published evidence of their skin sensitization effects. Models reported herein provide more accurate alternative to LLNA testing for human skin sensitization assessment across diverse chemical data. In addition, they can also be used to guide the structural optimization of toxic compounds to reduce their skin sensitization potential.

Entities:  

Keywords:  QSAR modeling; Skin sensitization; human data; virtual screening

Year:  2016        PMID: 28630595      PMCID: PMC5473635          DOI: 10.1039/C6GC01836J

Source DB:  PubMed          Journal:  Green Chem        ISSN: 1463-9262            Impact factor:   10.182


  89 in total

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2.  QSAR Modeling and Prediction of Drug-Drug Interactions.

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4.  Combinatorial QSAR modeling of chemical toxicants tested against Tetrahymena pyriformis.

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5.  Fragment-based prediction of skin sensitization using recursive partitioning.

Authors:  Jing Lu; Mingyue Zheng; Yong Wang; Qiancheng Shen; Xiaomin Luo; Hualiang Jiang; Kaixian Chen
Journal:  J Comput Aided Mol Des       Date:  2011-09-20       Impact factor: 3.686

Review 6.  Categorization of chemicals according to their relative human skin sensitizing potency.

Authors:  David A Basketter; Nathalie Alépée; Takao Ashikaga; João Barroso; Nicola Gilmour; Carsten Goebel; Jalila Hibatallah; Sebastian Hoffmann; Petra Kern; Silvia Martinozzi-Teissier; Gavin Maxwell; Kerstin Reisinger; Hitoshi Sakaguchi; Andreas Schepky; Magalie Tailhardat; Marie Templier
Journal:  Dermatitis       Date:  2014 Jan-Feb       Impact factor: 4.845

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Authors:  D Urbisch; N Honarvar; S N Kolle; A Mehling; T Ramirez; W Teubner; R Landsiedel
Journal:  Toxicol In Vitro       Date:  2016-04-14       Impact factor: 3.500

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Journal:  Environ Health Perspect       Date:  2015-11       Impact factor: 9.031

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2.  Multi-Descriptor Read Across (MuDRA): A Simple and Transparent Approach for Developing Accurate Quantitative Structure-Activity Relationship Models.

Authors:  Vinicius M Alves; Alexander Golbraikh; Stephen J Capuzzi; Kammy Liu; Wai In Lam; Daniel Robert Korn; Diane Pozefsky; Carolina Horta Andrade; Eugene N Muratov; Alexander Tropsha
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3.  Chemical toxicity prediction for major classes of industrial chemicals: Is it possible to develop universal models covering cosmetics, drugs, and pesticides?

Authors:  Vinicius M Alves; Eugene N Muratov; Alexey Zakharov; Nail N Muratov; Carolina H Andrade; Alexander Tropsha
Journal:  Food Chem Toxicol       Date:  2017-04-12       Impact factor: 6.023

4.  PreS/MD: Predictor of Sensitization Hazard for Chemical Substances Released From Medical Devices.

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5.  Advances in Assessing Hazard and Risk to Emerging Threats and Emergency Response: Comparing and Contrasting Efforts of 3 Federal Agencies.

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Review 6.  Immunogenicity of Protein Pharmaceuticals.

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7.  Mapping Chemical Respiratory Sensitization: How Useful Are Our Current Computational Tools?

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8.  Phantom PAINS: Problems with the Utility of Alerts for Pan-Assay INterference CompoundS.

Authors:  Stephen J Capuzzi; Eugene N Muratov; Alexander Tropsha
Journal:  J Chem Inf Model       Date:  2017-02-25       Impact factor: 4.956

9.  Cheminformatics-driven discovery of polymeric micelle formulations for poorly soluble drugs.

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Journal:  Sci Adv       Date:  2019-06-26       Impact factor: 14.136

10.  Evaluation of QSAR Equations for Virtual Screening.

Authors:  Jacob Spiegel; Hanoch Senderowitz
Journal:  Int J Mol Sci       Date:  2020-10-22       Impact factor: 5.923

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