Literature DB >> 28601983

Functions of intrinsic disorder in transmembrane proteins.

Magnus Kjaergaard1,2,3,4, Birthe B Kragelund5.   

Abstract

Intrinsic disorder is common in integral membrane proteins, particularly in the intracellular domains. Despite this observation, these domains are not always recognized as being disordered. In this review, we will discuss the biological functions of intrinsically disordered regions of membrane proteins, and address why the flexibility afforded by disorder is mechanistically important. Intrinsically disordered regions are present in many common classes of membrane proteins including ion channels and transporters; G-protein coupled receptors (GPCRs), receptor tyrosine kinases and cytokine receptors. The functions of the disordered regions are many and varied. We will discuss selected examples including: (1) Organization of receptors, kinases, phosphatases and second messenger sources into signaling complexes. (2) Modulation of the membrane-embedded domain function by ball-and-chain like mechanisms. (3) Trafficking of membrane proteins. (4) Transient membrane associations. (5) Post-translational modifications most notably phosphorylation and (6) disorder-linked isoform dependent function. We finish the review by discussing the future challenges facing the membrane protein community regarding protein disorder.

Entities:  

Keywords:  Ball-and-chain inhibition; Intrinsically disordered protein; Lipid interaction domain; Membrane protein; Receptor associated signalling complex

Mesh:

Substances:

Year:  2017        PMID: 28601983     DOI: 10.1007/s00018-017-2562-5

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  210 in total

Review 1.  Targeting intrinsically disordered proteins in rational drug discovery.

Authors:  Susmitha Ambadipudi; Markus Zweckstetter
Journal:  Expert Opin Drug Discov       Date:  2015-11-07       Impact factor: 6.098

2.  Identification of cholesterol binding sites in the serotonin1A receptor.

Authors:  Durba Sengupta; Amitabha Chattopadhyay
Journal:  J Phys Chem B       Date:  2012-10-24       Impact factor: 2.991

Review 3.  Introducing protein intrinsic disorder.

Authors:  Johnny Habchi; Peter Tompa; Sonia Longhi; Vladimir N Uversky
Journal:  Chem Rev       Date:  2014-04-17       Impact factor: 60.622

4.  A short amino acid sequence able to specify nuclear location.

Authors:  D Kalderon; B L Roberts; W D Richardson; A E Smith
Journal:  Cell       Date:  1984-12       Impact factor: 41.582

5.  Extrasynaptic NMDARs oppose synaptic NMDARs by triggering CREB shut-off and cell death pathways.

Authors:  G E Hardingham; Y Fukunaga; H Bading
Journal:  Nat Neurosci       Date:  2002-05       Impact factor: 24.884

6.  Modulating the intrinsic disorder in the cytoplasmic domain alters the biological activity of the N-methyl-D-aspartate-sensitive glutamate receptor.

Authors:  Ucheor B Choi; Rashek Kazi; Natalie Stenzoski; Lonnie P Wollmuth; Vladimir N Uversky; Mark E Bowen
Journal:  J Biol Chem       Date:  2013-06-19       Impact factor: 5.157

7.  Structural basis of PIP2 activation of the classical inward rectifier K+ channel Kir2.2.

Authors:  Scott B Hansen; Xiao Tao; Roderick MacKinnon
Journal:  Nature       Date:  2011-08-28       Impact factor: 49.962

8.  Intrinsic Disorder in Transmembrane Proteins: Roles in Signaling and Topology Prediction.

Authors:  Jérôme Bürgi; Bin Xue; Vladimir N Uversky; F Gisou van der Goot
Journal:  PLoS One       Date:  2016-07-08       Impact factor: 3.240

Review 9.  Synaptic versus extrasynaptic NMDA receptor signalling: implications for neurodegenerative disorders.

Authors:  Giles E Hardingham; Hilmar Bading
Journal:  Nat Rev Neurosci       Date:  2010-09-15       Impact factor: 34.870

Review 10.  Alternative splicing of intrinsically disordered regions and rewiring of protein interactions.

Authors:  Marija Buljan; Guilhem Chalancon; A Keith Dunker; Alex Bateman; S Balaji; Monika Fuxreiter; M Madan Babu
Journal:  Curr Opin Struct Biol       Date:  2013-05-22       Impact factor: 6.809

View more
  22 in total

Review 1.  The Structural and Functional Diversity of Intrinsically Disordered Regions in Transmembrane Proteins.

Authors:  Rajeswari Appadurai; Vladimir N Uversky; Anand Srivastava
Journal:  J Membr Biol       Date:  2019-05-28       Impact factor: 1.843

Review 2.  Phosphorylation of tight junction transmembrane proteins: Many sites, much to do.

Authors:  Christina M Van Itallie; James M Anderson
Journal:  Tissue Barriers       Date:  2017-10-30

3.  Phosphorylation-Dependent Conformations of the Disordered Carboxyl-Terminus Domain in the Epidermal Growth Factor Receptor.

Authors:  Raju Regmi; Shwetha Srinivasan; Andrew P Latham; Vandna Kukshal; Weidong Cui; Bin Zhang; Ron Bose; Gabriela S Schlau-Cohen
Journal:  J Phys Chem Lett       Date:  2020-11-12       Impact factor: 6.475

4.  Defining the Kv2.1-syntaxin molecular interaction identifies a first-in-class small molecule neuroprotectant.

Authors:  Chung-Yang Yeh; Zhaofeng Ye; Aubin Moutal; Shivani Gaur; Amanda M Henton; Stylianos Kouvaros; Jami L Saloman; Karen A Hartnett-Scott; Thanos Tzounopoulos; Rajesh Khanna; Elias Aizenman; Carlos J Camacho
Journal:  Proc Natl Acad Sci U S A       Date:  2019-07-15       Impact factor: 11.205

5.  Subnanometer resolution cryo-EM structure of Arabidopsis thaliana ATG9.

Authors:  Louis Tung Faat Lai; Chuanyang Yu; Jan Siu Kei Wong; Ho Sing Lo; Samir Benlekbir; Liwen Jiang; Wilson Chun Yu Lau
Journal:  Autophagy       Date:  2019-07-16       Impact factor: 16.016

Review 6.  Advances in studying protein disorder with solid-state NMR.

Authors:  Ansgar B Siemer
Journal:  Solid State Nucl Magn Reson       Date:  2020-01-12       Impact factor: 2.293

7.  Presence and structure-activity relationship of intrinsically disordered regions across mucins.

Authors:  Joseph Carmicheal; Pranita Atri; Sunandini Sharma; Sushil Kumar; Ramakanth Chirravuri Venkata; Prakash Kulkarni; Ravi Salgia; Dario Ghersi; Sukhwinder Kaur; Surinder K Batra
Journal:  FASEB J       Date:  2020-01-05       Impact factor: 5.191

8.  Cytokine receptor cluster size impacts its endocytosis and signaling.

Authors:  Laura Salavessa; Thibault Lagache; Valérie Malardé; Alexandre Grassart; Jean-Christophe Olivo-Marin; Alexis Canette; Michael Trichet; Philippe J Sansonetti; Nathalie Sauvonnet
Journal:  Proc Natl Acad Sci U S A       Date:  2021-09-14       Impact factor: 11.205

9.  flDPnn: Accurate intrinsic disorder prediction with putative propensities of disorder functions.

Authors:  Gang Hu; Akila Katuwawala; Kui Wang; Zhonghua Wu; Sina Ghadermarzi; Jianzhao Gao; Lukasz Kurgan
Journal:  Nat Commun       Date:  2021-07-21       Impact factor: 14.919

10.  Order and disorder-An integrative structure of the full-length human growth hormone receptor.

Authors:  Noah Kassem; Raul Araya-Secchi; Katrine Bugge; Abigail Barclay; Helena Steinocher; Adree Khondker; Yong Wang; Aneta J Lenard; Jochen Bürck; Cagla Sahin; Anne S Ulrich; Michael Landreh; Martin Cramer Pedersen; Maikel C Rheinstädter; Per Amstrup Pedersen; Kresten Lindorff-Larsen; Lise Arleth; Birthe B Kragelund
Journal:  Sci Adv       Date:  2021-06-30       Impact factor: 14.136

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.