Literature DB >> 23706950

Alternative splicing of intrinsically disordered regions and rewiring of protein interactions.

Marija Buljan1, Guilhem Chalancon, A Keith Dunker, Alex Bateman, S Balaji, Monika Fuxreiter, M Madan Babu.   

Abstract

Alternatively spliced protein segments tend to be intrinsically disordered and contain linear interaction motifs and/or post-translational modification sites. An emerging concept is that differential inclusion of such disordered segments can mediate new protein interactions, and hence change the context in which the biochemical or molecular functions are carried out by the protein. Since genes with disordered regions are enriched in regulatory and signaling functions, the resulting protein isoforms could alter their function in different tissues and organisms by rewiring interaction networks through the recruitment of distinct interaction partners via the alternatively spliced disordered segments. In this manner, the alternative splicing of mRNA coding for disordered segments may contribute to the emergence of new traits during evolution, development and disease.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 23706950     DOI: 10.1016/j.sbi.2013.03.006

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  77 in total

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2.  From sequence and forces to structure, function, and evolution of intrinsically disordered proteins.

Authors:  Julie D Forman-Kay; Tanja Mittag
Journal:  Structure       Date:  2013-09-03       Impact factor: 5.006

Review 3.  Features of molecular recognition of intrinsically disordered proteins via coupled folding and binding.

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Journal:  Protein Sci       Date:  2019-09-04       Impact factor: 6.725

Review 4.  The Structural and Functional Diversity of Intrinsically Disordered Regions in Transmembrane Proteins.

Authors:  Rajeswari Appadurai; Vladimir N Uversky; Anand Srivastava
Journal:  J Membr Biol       Date:  2019-05-28       Impact factor: 1.843

5.  Intrinsic disorder in spondins and some of their interacting partners.

Authors:  Oluwole Alowolodu; Gbemisola Johnson; Lamis Alashwal; Iqbal Addou; Irina V Zhdanova; Vladimir N Uversky
Journal:  Intrinsically Disord Proteins       Date:  2016-12-15

6.  Exploring the functional impact of alternative splicing on human protein isoforms using available annotation sources.

Authors:  Dinanath Sulakhe; Mark D'Souza; Sheng Wang; Sandhya Balasubramanian; Prashanth Athri; Bingqing Xie; Stefan Canzar; Gady Agam; T Conrad Gilliam; Natalia Maltsev
Journal:  Brief Bioinform       Date:  2019-09-27       Impact factor: 11.622

Review 7.  Intrinsically disordered proteins in crowded milieu: when chaos prevails within the cellular gumbo.

Authors:  Alexander V Fonin; April L Darling; Irina M Kuznetsova; Konstantin K Turoverov; Vladimir N Uversky
Journal:  Cell Mol Life Sci       Date:  2018-07-31       Impact factor: 9.261

8.  Dissecting physical structure of calreticulin, an intrinsically disordered Ca2+-buffering chaperone from endoplasmic reticulum.

Authors:  Anna Rita Migliaccio; Vladimir N Uversky
Journal:  J Biomol Struct Dyn       Date:  2017-05-26

9.  Multiple Weak Linear Motifs Enhance Recruitment and Processivity in SPOP-Mediated Substrate Ubiquitination.

Authors:  Wendy K Pierce; Christy R Grace; Jihun Lee; Amanda Nourse; Melissa R Marzahn; Edmond R Watson; Anthony A High; Junmin Peng; Brenda A Schulman; Tanja Mittag
Journal:  J Mol Biol       Date:  2015-10-22       Impact factor: 5.469

10.  FFPred 3: feature-based function prediction for all Gene Ontology domains.

Authors:  Domenico Cozzetto; Federico Minneci; Hannah Currant; David T Jones
Journal:  Sci Rep       Date:  2016-08-26       Impact factor: 4.379

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