Literature DB >> 33179922

Phosphorylation-Dependent Conformations of the Disordered Carboxyl-Terminus Domain in the Epidermal Growth Factor Receptor.

Raju Regmi1, Shwetha Srinivasan1, Andrew P Latham1, Vandna Kukshal2, Weidong Cui3, Bin Zhang1, Ron Bose2, Gabriela S Schlau-Cohen1.   

Abstract

The epidermal growth factor receptor (EGFR), a receptor tyrosine kinase, regulates basic cellular functions and is a major target for anticancer therapeutics. The carboxyl-terminus domain is a disordered region of EGFR that contains the tyrosine residues, which undergo autophosphorylation followed by docking of signaling proteins. Local phosphorylation-dependent secondary structure has been identified and is thought to be associated with the signaling cascade. Deciphering and distinguishing the overall conformations, however, have been challenging because of the disordered nature of the carboxyl-terminus domain and resultant lack of well-defined three-dimensional structure for most of the domain. We investigated the overall conformational states of the isolated EGFR carboxyl-terminus domain using single-molecule Förster resonance energy transfer and coarse-grained simulations. Our results suggest that electrostatic interactions between charged residues emerge within the disordered domain upon phosphorylation, producing a looplike conformation. This conformation may enable binding of downstream signaling proteins and potentially reflect a general mechanism in which electrostatics transiently generate functional architectures in disordered regions of a well-folded protein.

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Year:  2020        PMID: 33179922      PMCID: PMC8063277          DOI: 10.1021/acs.jpclett.0c02327

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  76 in total

Review 1.  A structural perspective on the regulation of the epidermal growth factor receptor.

Authors:  Erika Kovacs; Julie Anne Zorn; Yongjian Huang; Tiago Barros; John Kuriyan
Journal:  Annu Rev Biochem       Date:  2015-01-26       Impact factor: 23.643

2.  Inactivation of isocitrate dehydrogenase by phosphorylation is mediated by the negative charge of the phosphate.

Authors:  P E Thorsness; D E Koshland
Journal:  J Biol Chem       Date:  1987-08-05       Impact factor: 5.157

3.  Crystal structure of a truncated epidermal growth factor receptor extracellular domain bound to transforming growth factor alpha.

Authors:  Thomas P J Garrett; Neil M McKern; Meizhen Lou; Thomas C Elleman; Timothy E Adams; George O Lovrecz; Hong-Jian Zhu; Francesca Walker; Morry J Frenkel; Peter A Hoyne; Robert N Jorissen; Edouard C Nice; Antony W Burgess; Colin W Ward
Journal:  Cell       Date:  2002-09-20       Impact factor: 41.582

4.  Analysis of the Role of the C-Terminal Tail in the Regulation of the Epidermal Growth Factor Receptor.

Authors:  Erika Kovacs; Rahul Das; Qi Wang; Timothy S Collier; Aaron Cantor; Yongjian Huang; Kathryn Wong; Amar Mirza; Tiago Barros; Patricia Grob; Natalia Jura; Ron Bose; John Kuriyan
Journal:  Mol Cell Biol       Date:  2015-06-29       Impact factor: 4.272

5.  Sequence Effects on Size, Shape, and Structural Heterogeneity in Intrinsically Disordered Proteins.

Authors:  Upayan Baul; Debayan Chakraborty; Mauro L Mugnai; John E Straub; D Thirumalai
Journal:  J Phys Chem B       Date:  2019-04-15       Impact factor: 2.991

6.  Presence and utility of intrinsically disordered regions in kinases.

Authors:  Jaymin J Kathiriya; Ravi Ramesh Pathak; Eric Clayman; Bin Xue; Vladimir N Uversky; Vrushank Davé
Journal:  Mol Biosyst       Date:  2014-11

7.  Nucleotide binding by the epidermal growth factor receptor protein-tyrosine kinase. Trinitrophenyl-ATP as a spectroscopic probe.

Authors:  K Cheng; J G Koland
Journal:  J Biol Chem       Date:  1996-01-05       Impact factor: 5.157

8.  Structure of the epidermal growth factor receptor kinase domain alone and in complex with a 4-anilinoquinazoline inhibitor.

Authors:  Jennifer Stamos; Mark X Sliwkowski; Charles Eigenbrot
Journal:  J Biol Chem       Date:  2002-08-23       Impact factor: 5.157

9.  A comprehensive pathway map of epidermal growth factor receptor signaling.

Authors:  Kanae Oda; Yukiko Matsuoka; Akira Funahashi; Hiroaki Kitano
Journal:  Mol Syst Biol       Date:  2005-05-25       Impact factor: 11.429

10.  Intrinsic Disorder in Transmembrane Proteins: Roles in Signaling and Topology Prediction.

Authors:  Jérôme Bürgi; Bin Xue; Vladimir N Uversky; F Gisou van der Goot
Journal:  PLoS One       Date:  2016-07-08       Impact factor: 3.240

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  6 in total

Review 1.  Unifying coarse-grained force fields for folded and disordered proteins.

Authors:  Andrew P Latham; Bin Zhang
Journal:  Curr Opin Struct Biol       Date:  2021-09-15       Impact factor: 7.786

2.  Structural and dynamic characterization of the C-terminal tail of ErbB2: Disordered but not random.

Authors:  Louise Pinet; Ying-Hui Wang; Célia Deville; Ewen Lescop; Françoise Guerlesquin; Ali Badache; François Bontems; Nelly Morellet; Dominique Durand; Nadine Assrir; Carine van Heijenoort
Journal:  Biophys J       Date:  2021-03-17       Impact factor: 4.033

Review 3.  Regulation of EGFR signalling by palmitoylation and its role in tumorigenesis.

Authors:  Yasmin A Kadry; Jia-Ying Lee; Eric S Witze
Journal:  Open Biol       Date:  2021-10-06       Impact factor: 6.411

Review 4.  Expanding the Disorder-Function Paradigm in the C-Terminal Tails of Erbbs.

Authors:  Louise Pinet; Nadine Assrir; Carine van Heijenoort
Journal:  Biomolecules       Date:  2021-11-14

5.  Ligand-induced transmembrane conformational coupling in monomeric EGFR.

Authors:  Shwetha Srinivasan; Raju Regmi; Xingcheng Lin; Courtney A Dreyer; Xuyan Chen; Steven D Quinn; Wei He; Matthew A Coleman; Kermit L Carraway; Bin Zhang; Gabriela S Schlau-Cohen
Journal:  Nat Commun       Date:  2022-07-06       Impact factor: 17.694

6.  Multiscale modeling of genome organization with maximum entropy optimization.

Authors:  Xingcheng Lin; Yifeng Qi; Andrew P Latham; Bin Zhang
Journal:  J Chem Phys       Date:  2021-07-07       Impact factor: 3.488

  6 in total

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