Literature DB >> 28301141

Reconstitution and Substrate Specificity of the Radical S-Adenosyl-methionine Thiazole C-Methyltransferase in Thiomuracin Biosynthesis.

Nilkamal Mahanta1,2, Zhengan Zhang1, Graham A Hudson1, Wilfred A van der Donk1,2,3, Douglas A Mitchell1,2.   

Abstract

Thiomuracin is a thiopeptide antibiotic with potent activity toward Gram-positive drug-resistant bacteria. Thiomuracin is biosynthesized from a precursor peptide, TbtA, by a complex array of posttranslational modifications. One of several intriguing transformations is the C-methylation of thiazole, occurring at an unactivated sp2 carbon. Herein, we report the in vitro reconstitution of TbtI, the responsible radical S-adenosyl-methionine (rSAM) C-methyltransferase, which catalyzes the formation of 5-methylthiazole at a single site. Our studies demonstrate that a linear hexazole-bearing intermediate of TbtA is a substrate for TbtI whereas macrocyclized thiomuracin GZ is not. In determining the minimal substrate for TbtI, we found that the enzyme is functional when most of the leader peptide has been removed. The in vitro reconstitution of TbtI, a class C rSAM methyltransferase, further adds to the chemical versatility of rSAM enzymes, and informs on the complexity of thiomuracin biosynthesis.

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Year:  2017        PMID: 28301141      PMCID: PMC5477235          DOI: 10.1021/jacs.7b00693

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  41 in total

1.  Heterologous production of thiostrepton A and biosynthetic engineering of thiostrepton analogs.

Authors:  Chaoxuan Li; Feifei Zhang; Wendy L Kelly
Journal:  Mol Biosyst       Date:  2010-11-25

2.  Modularity of RiPP Enzymes Enables Designed Synthesis of Decorated Peptides.

Authors:  Debosmita Sardar; Zhenjian Lin; Eric W Schmidt
Journal:  Chem Biol       Date:  2015-07-09

Review 3.  Mechanistic diversity of radical S-adenosylmethionine (SAM)-dependent methylation.

Authors:  Matthew R Bauerle; Erica L Schwalm; Squire J Booker
Journal:  J Biol Chem       Date:  2014-12-04       Impact factor: 5.157

4.  GenK-catalyzed C-6' methylation in the biosynthesis of gentamicin: isolation and characterization of a cobalamin-dependent radical SAM enzyme.

Authors:  Hak Joong Kim; Reid M McCarty; Yasushi Ogasawara; Yung-nan Liu; Steven O Mansoorabadi; Jake LeVieux; Hung-wen Liu
Journal:  J Am Chem Soc       Date:  2013-05-21       Impact factor: 15.419

5.  Nosiheptide biosynthesis featuring a unique indole side ring formation on the characteristic thiopeptide framework.

Authors:  Yi Yu; Lian Duan; Qi Zhang; Rijing Liao; Ying Ding; Haixue Pan; Evelyn Wendt-Pienkowski; Gongli Tang; Ben Shen; Wen Liu
Journal:  ACS Chem Biol       Date:  2009-10-16       Impact factor: 5.100

6.  Ribosomally synthesized thiopeptide antibiotics targeting elongation factor Tu.

Authors:  Rowan P Morris; Jennifer A Leeds; Hans Ulrich Naegeli; Lukas Oberer; Klaus Memmert; Eric Weber; Matthew J LaMarche; Christian N Parker; Nathalie Burrer; Stacey Esterow; Andreas E Hein; Esther K Schmitt; Philipp Krastel
Journal:  J Am Chem Soc       Date:  2009-04-29       Impact factor: 15.419

7.  Spectroscopic and Electrochemical Characterization of the Iron-Sulfur and Cobalamin Cofactors of TsrM, an Unusual Radical S-Adenosylmethionine Methylase.

Authors:  Anthony J Blaszczyk; Alexey Silakov; Bo Zhang; Stephanie J Maiocco; Nicholas D Lanz; Wendy L Kelly; Sean J Elliott; Carsten Krebs; Squire J Booker
Journal:  J Am Chem Soc       Date:  2016-03-03       Impact factor: 15.419

Review 8.  Thiopeptide antibiotics: retrospective and recent advances.

Authors:  Xavier Just-Baringo; Fernando Albericio; Mercedes Álvarez
Journal:  Mar Drugs       Date:  2014-01-17       Impact factor: 5.118

9.  The B12-Radical SAM Enzyme PoyC Catalyzes Valine Cβ-Methylation during Polytheonamide Biosynthesis.

Authors:  Aubérie Parent; Alain Guillot; Alhosna Benjdia; Gwladys Chartier; Jérôme Leprince; Olivier Berteau
Journal:  J Am Chem Soc       Date:  2016-11-29       Impact factor: 15.419

Review 10.  Follow the leader: the use of leader peptides to guide natural product biosynthesis.

Authors:  Trent J Oman; Wilfred A van der Donk
Journal:  Nat Chem Biol       Date:  2010-01       Impact factor: 15.040

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  15 in total

1.  Reconstitution and Substrate Specificity of the Thioether-Forming Radical S-Adenosylmethionine Enzyme in Freyrasin Biosynthesis.

Authors:  Timothy W Precord; Nilkamal Mahanta; Douglas A Mitchell
Journal:  ACS Chem Biol       Date:  2019-09-09       Impact factor: 5.100

2.  Lessons From the Studies of a CC Bond Forming Radical SAM Enzyme in Molybdenum Cofactor Biosynthesis.

Authors:  Haoran Pang; Kenichi Yokoyama
Journal:  Methods Enzymol       Date:  2018-06-01       Impact factor: 1.600

Review 3.  RiPP antibiotics: biosynthesis and engineering potential.

Authors:  Graham A Hudson; Douglas A Mitchell
Journal:  Curr Opin Microbiol       Date:  2018-03-10       Impact factor: 7.934

4.  Ribosomal Natural Products, Tailored To Fit.

Authors:  Michael A Funk; Wilfred A van der Donk
Journal:  Acc Chem Res       Date:  2017-07-06       Impact factor: 22.384

Review 5.  Making and breaking carbon-carbon bonds in class C radical SAM methyltransferases.

Authors:  Marley A Brimberry; Liju Mathew; William Lanzilotta
Journal:  J Inorg Biochem       Date:  2021-10-22       Impact factor: 4.155

6.  Bioinformatic Mapping of Radical S-Adenosylmethionine-Dependent Ribosomally Synthesized and Post-Translationally Modified Peptides Identifies New Cα, Cβ, and Cγ-Linked Thioether-Containing Peptides.

Authors:  Graham A Hudson; Brandon J Burkhart; Adam J DiCaprio; Christopher J Schwalen; Bryce Kille; Taras V Pogorelov; Douglas A Mitchell
Journal:  J Am Chem Soc       Date:  2019-05-13       Impact factor: 15.419

Review 7.  Radical S-Adenosylmethionine Enzymes Involved in RiPP Biosynthesis.

Authors:  Nilkamal Mahanta; Graham A Hudson; Douglas A Mitchell
Journal:  Biochemistry       Date:  2017-09-22       Impact factor: 3.162

Review 8.  New developments in RiPP discovery, enzymology and engineering.

Authors:  Manuel Montalbán-López; Thomas A Scott; Sangeetha Ramesh; Imran R Rahman; Auke J van Heel; Jakob H Viel; Vahe Bandarian; Elke Dittmann; Olga Genilloud; Yuki Goto; María José Grande Burgos; Colin Hill; Seokhee Kim; Jesko Koehnke; John A Latham; A James Link; Beatriz Martínez; Satish K Nair; Yvain Nicolet; Sylvie Rebuffat; Hans-Georg Sahl; Dipti Sareen; Eric W Schmidt; Lutz Schmitt; Konstantin Severinov; Roderich D Süssmuth; Andrew W Truman; Huan Wang; Jing-Ke Weng; Gilles P van Wezel; Qi Zhang; Jin Zhong; Jörn Piel; Douglas A Mitchell; Oscar P Kuipers; Wilfred A van der Donk
Journal:  Nat Prod Rep       Date:  2020-09-16       Impact factor: 15.111

Review 9.  Radical SAM Enzymes in the Biosynthesis of Ribosomally Synthesized and Post-translationally Modified Peptides (RiPPs).

Authors:  Alhosna Benjdia; Clémence Balty; Olivier Berteau
Journal:  Front Chem       Date:  2017-11-08       Impact factor: 5.221

10.  Mechanism of a Class C Radical S-Adenosyl-l-methionine Thiazole Methyl Transferase.

Authors:  Zhengan Zhang; Nilkamal Mahanta; Graham A Hudson; Douglas A Mitchell; Wilfred A van der Donk
Journal:  J Am Chem Soc       Date:  2017-12-15       Impact factor: 15.419

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