Literature DB >> 34717253

Making and breaking carbon-carbon bonds in class C radical SAM methyltransferases.

Marley A Brimberry1, Liju Mathew1, William Lanzilotta2.   

Abstract

Radical S-adenosylmethionine (SAM) enzymes utilize a [4Fe-4S]1+ cluster and S-(5'-adenosyl)-L-methionine, (SAM), to generate a highly reactive radical and catalyze what is arguably the most diverse set of chemical reactions for any known enzyme family. At the heart of radical SAM catalysis is a highly reactive 5'-deoxyadenosyl radical intermediate (5'-dAdo●) generated through reductive cleavage of SAM or nucleophilic attack of the unique iron of the [4Fe-4S]+ cluster on the 5' C atom of SAM. Spectroscopic studies reveal the 5'-dAdo● is transiently captured in an FeC bond (Ω species). In the presence of substrate, homolytic scission of this metal‑carbon bond regenerates the 5'-dAdo● for catalytic hydrogen atom abstraction. While reminiscent of the adenosylcobalamin mechanism, radical SAM enzymes appear to encompass greater catalytic diversity. In this review we discuss recent developments for radical SAM enzymes involved in unique chemical rearrangements, specifically regarding class C radical SAM methyltransferases. Illuminating this class of radical SAM enzymes is especially significant as many enzymes have been shown to play critical roles in pathogenesis and the synthesis of novel antimicrobial compounds.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  3-methyl-2-indolic acid; Class C methyl transferase; Jawsamycin; Radical SAM enzyme; Thiopeptide biosynthesis; Yatakemycin

Mesh:

Substances:

Year:  2021        PMID: 34717253      PMCID: PMC8667262          DOI: 10.1016/j.jinorgbio.2021.111636

Source DB:  PubMed          Journal:  J Inorg Biochem        ISSN: 0162-0134            Impact factor:   4.155


  74 in total

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3.  Structural evidence for direct hydride transfer from NADH to cytochrome P450nor.

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4.  HutZ is required for efficient heme utilization in Vibrio cholerae.

Authors:  Elizabeth E Wyckoff; Michael Schmitt; Angela Wilks; Shelley M Payne
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5.  Protoporphyrin formation in Rhizobium japonicum.

Authors:  J H Keithly; K D Nadler
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6.  Escherichia coli lipoyl synthase binds two distinct [4Fe-4S] clusters per polypeptide.

Authors:  Robert M Cicchillo; Kyung-Hoon Lee; Camelia Baleanu-Gogonea; Natasha M Nesbitt; Carsten Krebs; Squire J Booker
Journal:  Biochemistry       Date:  2004-09-21       Impact factor: 3.162

Review 7.  The biochemistry of heme biosynthesis.

Authors:  Ilka U Heinemann; Martina Jahn; Dieter Jahn
Journal:  Arch Biochem Biophys       Date:  2008-02-21       Impact factor: 4.013

8.  Radical-mediated enzymatic carbon chain fragmentation-recombination.

Authors:  Qi Zhang; Yuxue Li; Dandan Chen; Yi Yu; Lian Duan; Ben Shen; Wen Liu
Journal:  Nat Chem Biol       Date:  2011-01-16       Impact factor: 15.040

9.  Non-canonical active site architecture of the radical SAM thiamin pyrimidine synthase.

Authors:  Michael K Fenwick; Angad P Mehta; Yang Zhang; Sameh H Abdelwahed; Tadhg P Begley; Steven E Ealick
Journal:  Nat Commun       Date:  2015-03-27       Impact factor: 14.919

10.  A radical S-adenosyl-L-methionine enzyme and a methyltransferase catalyze cyclopropane formation in natural product biosynthesis.

Authors:  Wen-Bing Jin; Sheng Wu; Xiao-Hong Jian; Hua Yuan; Gong-Li Tang
Journal:  Nat Commun       Date:  2018-07-17       Impact factor: 14.919

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