Literature DB >> 27812832

Spectroscopic analyses of 2-oxoglutarate-dependent oxygenases: TauD as a case study.

Denis A Proshlyakov1, John McCracken1, Robert P Hausinger2,3.   

Abstract

A wide range of spectroscopic approaches have been used to interrogate the mononuclear iron metallocenter in 2-oxoglutarate (2OG)-dependent oxygenases. The results from these spectroscopic studies have provided valuable insights into the structural changes at the active site during substrate binding and catalysis, thus providing critical information that complements investigations of these enzymes by X-ray crystallography, biochemical, and computational approaches. This mini-review highlights taurine hydroxylase (taurine:2OG dioxygenase, TauD) as a case study to illustrate the wealth of knowledge that can be generated by applying a diverse array of spectroscopic investigations to a single enzyme. In particular, electronic absorption, circular dichroism, magnetic circular dichroism, conventional and pulse electron paramagnetic, Mössbauer, X-ray absorption, and resonance Raman methods have been exploited to uncover the properties of the metal site in TauD.

Entities:  

Keywords:  2-Oxoglutarate; Nonheme iron; Oxygenase; Spectroscopy

Mesh:

Substances:

Year:  2016        PMID: 27812832      PMCID: PMC5352539          DOI: 10.1007/s00775-016-1406-3

Source DB:  PubMed          Journal:  J Biol Inorg Chem        ISSN: 0949-8257            Impact factor:   3.358


  82 in total

1.  Invited award contribution for ACS Award in Inorganic Chemistry. Geometric and electronic structure contributions to function in bioinorganic chemistry: active sites in non-heme iron enzymes.

Authors:  E I Solomon
Journal:  Inorg Chem       Date:  2001-07-16       Impact factor: 5.165

2.  Calorimetric assessment of Fe(2+) binding to α-ketoglutarate/taurine dioxygenase: ironing out the energetics of metal coordination by the 2-His-1-carboxylate facial triad.

Authors:  Kate L Henderson; Tina A Müller; Robert P Hausinger; Joseph P Emerson
Journal:  Inorg Chem       Date:  2015-02-10       Impact factor: 5.165

3.  Role of the nonheme Fe(II) center in the biosynthesis of the plant hormone ethylene.

Authors:  A M Rocklin; D L Tierney; V Kofman; N M Brunhuber; B M Hoffman; R E Christoffersen; N O Reich; J D Lipscomb; L Que
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-06       Impact factor: 11.205

4.  Insight into the mechanism of an iron dioxygenase by resolution of steps following the FeIV=HO species.

Authors:  Piotr K Grzyska; Evan H Appelman; Robert P Hausinger; Denis A Proshlyakov
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-10       Impact factor: 11.205

5.  X-ray crystal structure of Escherichia coli taurine/alpha-ketoglutarate dioxygenase complexed to ferrous iron and substrates.

Authors:  Jonathan M Elkins; Matthew J Ryle; Ian J Clifton; Julie C Dunning Hotopp; John S Lloyd; Nicolai I Burzlaff; Jack E Baldwin; Robert P Hausinger; Peter L Roach
Journal:  Biochemistry       Date:  2002-04-23       Impact factor: 3.162

6.  Measuring the orientation of taurine in the active site of the non-heme Fe(II)/α-ketoglutarate-dependent taurine hydroxylase (TauD) using electron spin echo envelope modulation (ESEEM) spectroscopy.

Authors:  Thomas M Casey; Piotr K Grzyska; Robert P Hausinger; John McCracken
Journal:  J Phys Chem B       Date:  2013-08-29       Impact factor: 2.991

7.  EPR and Mössbauer studies of protocatechuate 4,5-dioxygenase. Characterization of a new Fe2+ environment.

Authors:  D M Arciero; J D Lipscomb; B H Huynh; T A Kent; E Münck
Journal:  J Biol Chem       Date:  1983-12-25       Impact factor: 5.157

8.  Thiolate ligation of the active site Fe2+ of isopenicillin N synthase derives from substrate rather than endogenous cysteine: spectroscopic studies of site-specific Cys----Ser mutated enzymes.

Authors:  A M Orville; V J Chen; A Kriauciunas; M R Harpel; B G Fox; E Münck; J D Lipscomb
Journal:  Biochemistry       Date:  1992-05-19       Impact factor: 3.162

9.  Substrate-triggered formation and remarkable stability of the C-H bond-cleaving chloroferryl intermediate in the aliphatic halogenase, SyrB2.

Authors:  Megan L Matthews; Courtney M Krest; Eric W Barr; Frédéric H Vaillancourt; Christopher T Walsh; Michael T Green; Carsten Krebs; J Martin Bollinger
Journal:  Biochemistry       Date:  2009-05-26       Impact factor: 3.162

10.  Toward the synthesis of more reactive S = 2 non-heme oxoiron(IV) complexes.

Authors:  Mayank Puri; Lawrence Que
Journal:  Acc Chem Res       Date:  2015-07-15       Impact factor: 22.384

View more
  12 in total

Review 1.  Dioxygen activation by nonheme iron enzymes with the 2-His-1-carboxylate facial triad that generate high-valent oxoiron oxidants.

Authors:  Subhasree Kal; Lawrence Que
Journal:  J Biol Inorg Chem       Date:  2017-01-10       Impact factor: 3.358

Review 2.  Glutarate L-2-hydroxylase (CsiD/GlaH) is an archetype Fe(II)/2-oxoglutarate-dependent dioxygenase.

Authors:  Caitlyn Q Herr; Lee Macomber; Efthalia Kalliri; Robert P Hausinger
Journal:  Adv Protein Chem Struct Biol       Date:  2019-06-10       Impact factor: 3.507

3.  Visualizing the Reaction Cycle in an Iron(II)- and 2-(Oxo)-glutarate-Dependent Hydroxylase.

Authors:  Andrew J Mitchell; Noah P Dunham; Ryan J Martinie; Jonathan A Bergman; Christopher J Pollock; Kai Hu; Benjamin D Allen; Wei-Chen Chang; Alexey Silakov; J Martin Bollinger; Carsten Krebs; Amie K Boal
Journal:  J Am Chem Soc       Date:  2017-09-20       Impact factor: 15.419

Review 4.  Understanding Biological Hydrogen Transfer Through the Lens of Temperature Dependent Kinetic Isotope Effects.

Authors:  Judith P Klinman; Adam R Offenbacher
Journal:  Acc Chem Res       Date:  2018-08-28       Impact factor: 22.384

Review 5.  Amazing Diversity in Biochemical Roles of Fe(II)/2-Oxoglutarate Oxygenases.

Authors:  Caitlyn Q Herr; Robert P Hausinger
Journal:  Trends Biochem Sci       Date:  2018-04-27       Impact factor: 13.807

6.  Strongly Coupled Redox-Linked Conformational Switching at the Active Site of the Non-Heme Iron-Dependent Dioxygenase, TauD.

Authors:  Christopher W John; Greg M Swain; Robert P Hausinger; Denis A Proshlyakov
Journal:  J Phys Chem B       Date:  2019-09-06       Impact factor: 2.991

7.  An Unusual Oxidative Rearrangement Catalyzed by a Divergent Member of the 2-Oxoglutarate-Dependent Dioxygenase Superfamily during Biosynthesis of Dehydrofosmidomycin.

Authors:  Elizabeth I Parkinson; Hani G Lakkis; Amir A Alwali; Mary Elizabeth M Metcalf; Ramya Modi; William W Metcalf
Journal:  Angew Chem Int Ed Engl       Date:  2022-06-07       Impact factor: 16.823

8.  Dioxygen Activation and O-O Bond Formation Reactions by Manganese Corroles.

Authors:  Mian Guo; Yong-Min Lee; Ranjana Gupta; Mi Sook Seo; Takehiro Ohta; Hua-Hua Wang; Hai-Yang Liu; Sunder N Dhuri; Ritimukta Sarangi; Shunichi Fukuzumi; Wonwoo Nam
Journal:  J Am Chem Soc       Date:  2017-10-31       Impact factor: 15.419

9.  Achieving One-Electron Oxidation of a Mononuclear Nonheme Iron(V)-Imido Complex.

Authors:  Seungwoo Hong; Xiaoyan Lu; Yong-Min Lee; Mi Sook Seo; Takehiro Ohta; Takashi Ogura; Martin Clémancey; Pascale Maldivi; Jean-Marc Latour; Ritimukta Sarangi; Wonwoo Nam
Journal:  J Am Chem Soc       Date:  2017-10-04       Impact factor: 15.419

10.  Manganese complex-catalyzed oxidation and oxidative kinetic resolution of secondary alcohols by hydrogen peroxide.

Authors:  Chengxia Miao; Xiao-Xi Li; Yong-Min Lee; Chungu Xia; Yong Wang; Wonwoo Nam; Wei Sun
Journal:  Chem Sci       Date:  2017-09-07       Impact factor: 9.825

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.