Literature DB >> 20147623

Insight into the mechanism of an iron dioxygenase by resolution of steps following the FeIV=HO species.

Piotr K Grzyska1, Evan H Appelman, Robert P Hausinger, Denis A Proshlyakov.   

Abstract

Iron oxygenases generate elusive transient oxygen species to catalyze substrate oxygenation in a wide range of metabolic processes. Here we resolve the reaction sequence and structures of such intermediates for the archetypal non-heme Fe(II) and alpha-ketoglutarate-dependent dioxygenase TauD. Time-resolved Raman spectra of the initial species with (16)O(18)O oxygen unequivocally establish the Fe(IV) horizontal lineO structure. (1)H/(2)H substitution reveals direct interaction between the oxo group and the C1 proton of substrate taurine. Two new transient species were resolved following Fe(IV) horizontal lineO; one is assigned to the nu(FeO) mode of an Fe(III) horizontal line O(H) species, and a second is likely to arise from the vibration of a metal-coordinated oxygenated product, such as Fe(II) horizontal line O horizontal line C(1) or Fe(II) horizontal line OOCR. These results provide direct insight into the mechanism of substrate oxygenation and suggest an alternative to the hydroxyl radical rebinding paradigm.

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Year:  2010        PMID: 20147623      PMCID: PMC2840172          DOI: 10.1073/pnas.0911565107

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

1.  Heme-Containing Oxygenases.

Authors:  Masanori Sono; Mark P. Roach; Eric D. Coulter; John H. Dawson
Journal:  Chem Rev       Date:  1996-11-07       Impact factor: 60.622

2.  Resonance Raman study of oxyhemerythrin and hydroxomethemerythrin. Evidence for hydrogen bonding of ligands to the iron-oxygen-iron center.

Authors:  A K Shiemke; T M Loehr; J Sanders-Loehr
Journal:  J Am Chem Soc       Date:  1986-04-01       Impact factor: 15.419

Review 3.  Mechanistic enzymology of oxygen activation by the cytochromes P450.

Authors:  Thomas M Makris; Roman Davydov; Ilia G Denisov; Brian M Hoffman; Stephen G Sligar
Journal:  Drug Metab Rev       Date:  2002-11       Impact factor: 4.518

4.  Resonance Raman spectroscopy of chloroperoxidase compound II provides direct evidence for the existence of an iron(IV)-hydroxide.

Authors:  Kari L Stone; Rachel K Behan; Michael T Green
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-08       Impact factor: 11.205

5.  Hydrogen atom abstraction by a high-valent manganese(V)-oxo corrolazine.

Authors:  David E Lansky; David P Goldberg
Journal:  Inorg Chem       Date:  2006-06-26       Impact factor: 5.165

6.  X-ray crystal structure of Escherichia coli taurine/alpha-ketoglutarate dioxygenase complexed to ferrous iron and substrates.

Authors:  Jonathan M Elkins; Matthew J Ryle; Ian J Clifton; Julie C Dunning Hotopp; John S Lloyd; Nicolai I Burzlaff; Jack E Baldwin; Robert P Hausinger; Peter L Roach
Journal:  Biochemistry       Date:  2002-04-23       Impact factor: 3.162

7.  EPR and ENDOR studies of cryoreduced compounds II of peroxidases and myoglobin. Proton-coupled electron transfer and protonation status of ferryl hemes.

Authors:  Roman Davydov; Robert L Osborne; Sun Hee Kim; John H Dawson; Brian M Hoffman
Journal:  Biochemistry       Date:  2008-04-12       Impact factor: 3.162

8.  Substrate-triggered formation and remarkable stability of the C-H bond-cleaving chloroferryl intermediate in the aliphatic halogenase, SyrB2.

Authors:  Megan L Matthews; Courtney M Krest; Eric W Barr; Frédéric H Vaillancourt; Christopher T Walsh; Michael T Green; Carsten Krebs; J Martin Bollinger
Journal:  Biochemistry       Date:  2009-05-26       Impact factor: 3.162

9.  C-H bond cleavage with reductants: re-investigating the reactivity of monomeric Mn(III/IV)-oxo complexes and the role of oxo ligand basicity.

Authors:  Trenton H Parsell; Meng-Yin Yang; A S Borovik
Journal:  J Am Chem Soc       Date:  2009-03-04       Impact factor: 15.419

10.  Incorporation of oxygen into the succinate co-product of iron(II) and 2-oxoglutarate dependent oxygenases from bacteria, plants and humans.

Authors:  Richard W D Welford; Joanna M Kirkpatrick; Luke A McNeill; Munish Puri; Neil J Oldham; Christopher J Schofield
Journal:  FEBS Lett       Date:  2005-09-26       Impact factor: 4.124

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  40 in total

Review 1.  Catalytic Mechanisms of Fe(II)- and 2-Oxoglutarate-dependent Oxygenases.

Authors:  Salette Martinez; Robert P Hausinger
Journal:  J Biol Chem       Date:  2015-07-07       Impact factor: 5.157

2.  Evidence that oxidative dephosphorylation by the nonheme Fe(II), α-ketoglutarate:UMP oxygenase occurs by stereospecific hydroxylation.

Authors:  Anwesha Goswami; Xiaodong Liu; Wenlong Cai; Thomas P Wyche; Tim S Bugni; Maïa Meurillon; Suzanne Peyrottes; Christian Perigaud; Koichi Nonaka; Jürgen Rohr; Steven G Van Lanen
Journal:  FEBS Lett       Date:  2017-01-25       Impact factor: 4.124

3.  Epoxidation Catalyzed by the Nonheme Iron(II)- and 2-Oxoglutarate-Dependent Oxygenase, AsqJ: Mechanistic Elucidation of Oxygen Atom Transfer by a Ferryl Intermediate.

Authors:  Jikun Li; Hsuan-Jen Liao; Yijie Tang; Jhih-Liang Huang; Lide Cha; Te-Sheng Lin; Justin L Lee; Igor V Kurnikov; Maria G Kurnikova; Wei-Chen Chang; Nei-Li Chan; Yisong Guo
Journal:  J Am Chem Soc       Date:  2020-03-16       Impact factor: 15.419

Review 4.  Glutarate L-2-hydroxylase (CsiD/GlaH) is an archetype Fe(II)/2-oxoglutarate-dependent dioxygenase.

Authors:  Caitlyn Q Herr; Lee Macomber; Efthalia Kalliri; Robert P Hausinger
Journal:  Adv Protein Chem Struct Biol       Date:  2019-06-10       Impact factor: 3.507

Review 5.  β-Hydroxyaspartic acid in siderophores: biosynthesis and reactivity.

Authors:  Clifford D Hardy; Alison Butler
Journal:  J Biol Inorg Chem       Date:  2018-06-26       Impact factor: 3.358

6.  Structural Origin of the Large Redox-Linked Reorganization in the 2-Oxoglutarate Dependent Oxygenase, TauD.

Authors:  Christopher W John; Robert P Hausinger; Denis A Proshlyakov
Journal:  J Am Chem Soc       Date:  2019-09-11       Impact factor: 15.419

7.  Isonitrile Formation by a Non-Heme Iron(II)-Dependent Oxidase/Decarboxylase.

Authors:  Nicholas C Harris; David A Born; Wenlong Cai; Yaobing Huang; Joelle Martin; Ryan Khalaf; Catherine L Drennan; Wenjun Zhang
Journal:  Angew Chem Int Ed Engl       Date:  2018-07-03       Impact factor: 15.336

8.  Evaluation of a concerted vs. sequential oxygen activation mechanism in α-ketoglutarate-dependent nonheme ferrous enzymes.

Authors:  Serra Goudarzi; Shyam R Iyer; Jeffrey T Babicz; James J Yan; Günther H J Peters; Hans E M Christensen; Britt Hedman; Keith O Hodgson; Edward I Solomon
Journal:  Proc Natl Acad Sci U S A       Date:  2020-02-24       Impact factor: 11.205

9.  Mechanistic insights into the bifunctional non-heme iron oxygenase carbapenem synthase by active site saturation mutagenesis.

Authors:  Ryan M Phelan; Craig A Townsend
Journal:  J Am Chem Soc       Date:  2013-05-13       Impact factor: 15.419

10.  Novel Approaches for the Accumulation of Oxygenated Intermediates to Multi-Millimolar Concentrations.

Authors:  Carsten Krebs; Laura M K Dassama; Megan L Matthews; Wei Jiang; John C Price; Victoria Korboukh; Ning Li; J Martin Bollinger
Journal:  Coord Chem Rev       Date:  2013-01-01       Impact factor: 22.315

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