| Literature DB >> 27467882 |
Clément Bailly1, Caroline Bodet-Milin1,2, Solène Couespel1, Hatem Necib2,3, Françoise Kraeber-Bodéré1,2, Catherine Ansquer1,2, Thomas Carlier1,2.
Abstract
PURPOSE: This study aimed to investigate the variability of textural features (TF) as a function of acquisition and reconstruction parameters within the context of multi-centric trials.Entities:
Mesh:
Year: 2016 PMID: 27467882 PMCID: PMC4965162 DOI: 10.1371/journal.pone.0159984
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
List of the different reconstruction parameters used as a function of the parameters studied.
| Parameters studied | Range | Constant parameters |
|---|---|---|
| 2, 4 and 6 | Post-filtering (0 mm FWHM) and time (180 s) | |
| 0, 2 and 5 | Number of iterations (2) and time (180 s) | |
| 60, 120 and 180 | Number of iterations (2) and post-filtering (2 mm FWHM) | |
| AW, OP, PSF and PSF-TOF | Number of iterations (2), post-filtering (0 mm FWHM) and time (180 s) | |
| 200×200, 256×256 and 400×400 | PSF-TOF (2 iterations and 2 mm FWHM post-filtering) using 120 s (200×200) or 188 s (256×256 and 400×400) |
Fig 1Acquisition and reconstruction settings.
List of each acquisition setting (defined by the time considered) with the reconstruction algorithm and attached parameters for mimicking conditions encountered in multi-centric trials. “i” represents the number of iterations, “mm” the FWHM Gaussian post-filtering and 200×200 or 256×256 the matrix size used.
Classification of the TF robustness with respect to SUV-based robustness.
| Rule | Robustness |
|---|---|
|
| High |
| Intermediate | |
| Low |
M stands for the metrics used (COV or D).
Fig 2Tumor illustration.
Illustration of a tumor (axial slice) reconstructed using different reconstruction settings. Two different images are presented for each reconstruction algorithm studied (AW, OP, PSF and PSF-TOF) corresponding to the minimum and maximum value of the parameters investigated (number of iterations, level of post-filtering and acquisition time). Upper row: variation of the number of iterations (2 and 6 iterations). Middle row: variation of the post-filtering level (0 mm or 5 mm FWHM). Bottom row: variation of the acquisition time for a surrogate of noise in the input data (60 s or 180 s). The grey scale level is identical for each image.
Fig 3Impact of the reconstruction algorithm.
Impact of the reconstruction algorithm on each TF using the default settings outlined in Table 1.
Robustness of each TF with respect to the robustness of SUV-based metrics.
| Robustness | High | Intermediate | Low |
|---|---|---|---|
| Homogeneity, Entropy, Energy, Dissimilarity, RP, ZP | Contrast, HGRE, HGZE, ZLNU, SZHGE | Correlation, LGRE, LGZE, LZLGE | |
| Homogeneity, Entropy, Energy, Contrast, Dissimilarity, RP, ZP | Correlation, HGRE, LGRE, HGZE, ZLNU, SZHGE, LGZE | LZLGE | |
| Entropy, Energy, RP, ZP | Homogeneity, Dissimilarity, ZLNU | Correlation, Contrast, HGRE, LGRE, HGZE, SZHGE, LGZE, LZLGE | |
| Homogeneity, Entropy, Energy, Dissimilarity, RP, ZP | HGRE, HGZE, ZLNU, SZHGE | Correlation, Contrast, LGRE, LGZE, LZLGE |
The impact of the number of iterations, the post-filtering level and the noise in input data were for the PSF-TOF algorithm. The impact of the reconstruction algorithm was derived using the 4 algorithms available (AW, OP, PSF and PSF-TOF).
Fig 4Impact of the matrix size.
Impact of the matrix size used for reconstruction (PSF-TOF with 2 iterations and 2 mm FWHM Gaussian post-filtering). Left: 200×200 (voxel size: 4×4×2 mm3), middle: 256×256 (voxel size: 3.1×3.1×2 mm3), right: 400×400 (voxel size: 2×2×2 mm3). The grey scale level is identical for each image.
Fig 5Impact of the matrix size using PSF-TOF.
Robustness of the matrix size.
Robustness of each TF with respect to the robustness of SUV-based metrics as a function of the matrix size for the PSF-TOF algorithm.
| Robustness | High | Intermediate | Low |
|---|---|---|---|
| Entropy, RP | Homogeneity, HGRE, HGZE, SZHGE, ZP | Correlation, Energy, Contrast, Dissimilarity, LGRE, ZLNU, LGZE, LZLGE |
Fig 6Robustness for multi-centric conditions.
Variation of the COV for each TF when pooling different reconstructions detailed in Table 1 in order to mimic multi-centric conditions.
Robustness with combination of multiple parameters.
Robustness of each TF with respect to the robustness of SUV-based metrics when combining multiple parameters (see details in Fig 1)
| Robustness | High | Intermediate | Low |
|---|---|---|---|
| Homogeneity, Entropy, RP, ZP | Energy, Dissimilarity, HGRE, HGZE, ZLNU, SZHGE | Correlation, Contrast, LGRE, LGZE, LZLGE |