Literature DB >> 27446676

Automated volumetric segmentation of retinal fluid on optical coherence tomography.

Jie Wang1, Miao Zhang2, Alex D Pechauer2, Liang Liu2, Thomas S Hwang2, David J Wilson2, Dengwang Li3, Yali Jia2.   

Abstract

We propose a novel automated volumetric segmentation method to detect and quantify retinal fluid on optical coherence tomography (OCT). The fuzzy level set method was introduced for identifying the boundaries of fluid filled regions on B-scans (x and y-axes) and C-scans (z-axis). The boundaries identified from three types of scans were combined to generate a comprehensive volumetric segmentation of retinal fluid. Then, artefactual fluid regions were removed using morphological characteristics and by identifying vascular shadowing with OCT angiography obtained from the same scan. The accuracy of retinal fluid detection and quantification was evaluated on 10 eyes with diabetic macular edema. Automated segmentation had good agreement with manual segmentation qualitatively and quantitatively. The fluid map can be integrated with OCT angiogram for intuitive clinical evaluation.

Entities:  

Keywords:  (100.0100) Image processing; (100.2960) Image analysis; (110.4500) Optical coherence tomography; (170.4470) Ophthalmology

Year:  2016        PMID: 27446676      PMCID: PMC4929662          DOI: 10.1364/BOE.7.001577

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  38 in total

1.  Optical coherence tomography for evaluating diabetic macular edema before and after vitrectomy.

Authors:  Pascale Massin; Graham Duguid; Ali Erginay; Belkacem Haouchine; Alain Gaudric
Journal:  Am J Ophthalmol       Date:  2003-02       Impact factor: 5.258

Review 2.  Diabetic retinopathy.

Authors:  David A Antonetti; Ronald Klein; Thomas W Gardner
Journal:  N Engl J Med       Date:  2012-03-29       Impact factor: 91.245

3.  Delineating fluid-filled region boundaries in optical coherence tomography images of the retina.

Authors:  Delia Cabrera Fernández
Journal:  IEEE Trans Med Imaging       Date:  2005-08       Impact factor: 10.048

4.  Cystoid macular edema: a correlation between macular volumetric parameters and visual acuity.

Authors:  Michael Mimouni; Yoav Nahum; Anna Levant; Boris Levant; Dov Weinberger
Journal:  Can J Ophthalmol       Date:  2014-02-22       Impact factor: 1.882

5.  Choroidal thickness in patients with diabetic retinopathy analyzed by spectral-domain optical coherence tomography.

Authors:  Caio V Regatieri; Lauren Branchini; Jill Carmody; James G Fujimoto; Jay S Duker
Journal:  Retina       Date:  2012-03       Impact factor: 4.256

6.  Three-dimensional segmentation of fluid-associated abnormalities in retinal OCT: probability constrained graph-search-graph-cut.

Authors:  Xinjian Chen; Meindert Niemeijer; Li Zhang; Kyungmoo Lee; Michael D Abramoff; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2012-03-19       Impact factor: 10.048

7.  Infrared scanning laser tomography of macular cysts.

Authors:  E Beausencourt; A Remky; A E Elsner; M E Hartnett; C L Trempe
Journal:  Ophthalmology       Date:  2000-02       Impact factor: 12.079

8.  Pars plana vitrectomy for intraocular inflammation-related cystoid macular edema unresponsive to corticosteroids. A preliminary study.

Authors:  P U Dugel; N A Rao; S Ozler; P E Liggett; R E Smith
Journal:  Ophthalmology       Date:  1992-10       Impact factor: 12.079

9.  OPTICAL COHERENCE TOMOGRAPHY ANGIOGRAPHY FEATURES OF DIABETIC RETINOPATHY.

Authors:  Thomas S Hwang; Yali Jia; Simon S Gao; Steven T Bailey; Andreas K Lauer; Christina J Flaxel; David J Wilson; David Huang
Journal:  Retina       Date:  2015-11       Impact factor: 4.256

10.  Automated segmentation of intraretinal cystoid fluid in optical coherence tomography.

Authors:  Gary R Wilkins; Odette M Houghton; Amy L Oldenburg
Journal:  IEEE Trans Biomed Eng       Date:  2012-01-16       Impact factor: 4.538

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  17 in total

1.  Three-dimensional structural and angiographic evaluation of foveal ischemia in diabetic retinopathy: method and validation.

Authors:  Bingjie Wang; Acner Camino; Shaohua Pi; Yukun Guo; Jie Wang; David Huang; Thomas S Hwang; Yali Jia
Journal:  Biomed Opt Express       Date:  2019-06-24       Impact factor: 3.732

2.  Deep-learning based, automated segmentation of macular edema in optical coherence tomography.

Authors:  Cecilia S Lee; Ariel J Tyring; Nicolaas P Deruyter; Yue Wu; Ariel Rokem; Aaron Y Lee
Journal:  Biomed Opt Express       Date:  2017-06-23       Impact factor: 3.732

3.  Joint retinal layer and fluid segmentation in OCT scans of eyes with severe macular edema using unsupervised representation and auto-context.

Authors:  Alessio Montuoro; Sebastian M Waldstein; Bianca S Gerendas; Ursula Schmidt-Erfurth; Hrvoje Bogunović
Journal:  Biomed Opt Express       Date:  2017-02-27       Impact factor: 3.732

4.  Intraretinal fluid identification via enhanced maps using optical coherence tomography images.

Authors:  Plácido L Vidal; Joaquim de Moura; Jorge Novo; Manuel G Penedo; Marcos Ortega
Journal:  Biomed Opt Express       Date:  2018-09-11       Impact factor: 3.732

5.  Automatic segmentation of nine retinal layer boundaries in OCT images of non-exudative AMD patients using deep learning and graph search.

Authors:  Leyuan Fang; David Cunefare; Chong Wang; Robyn H Guymer; Shutao Li; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2017-04-27       Impact factor: 3.732

6.  Deep learning approach for the detection and quantification of intraretinal cystoid fluid in multivendor optical coherence tomography.

Authors:  Freerk G Venhuizen; Bram van Ginneken; Bart Liefers; Freekje van Asten; Vivian Schreur; Sascha Fauser; Carel Hoyng; Thomas Theelen; Clara I Sánchez
Journal:  Biomed Opt Express       Date:  2018-03-07       Impact factor: 3.732

7.  Three-dimensional continuous max flow optimization-based serous retinal detachment segmentation in SD-OCT for central serous chorioretinopathy.

Authors:  Menglin Wu; Wen Fan; Qiang Chen; Zhenlong Du; Xiaoli Li; Songtao Yuan; Hyunjin Park
Journal:  Biomed Opt Express       Date:  2017-08-29       Impact factor: 3.732

8.  Deep learning-based classification and segmentation of retinal cavitations on optical coherence tomography images of macular telangiectasia type 2.

Authors:  Jessica Loo; Cindy X Cai; John Choong; Emily Y Chew; Martin Friedlander; Glenn J Jaffe; Sina Farsiu
Journal:  Br J Ophthalmol       Date:  2020-11-23       Impact factor: 4.638

9.  Automated Quantitative Assessment of Retinal Fluid Volumes as Important Biomarkers in Neovascular Age-Related Macular Degeneration.

Authors:  Tiarnan D L Keenan; Usha Chakravarthy; Anat Loewenstein; Emily Y Chew; Ursula Schmidt-Erfurth
Journal:  Am J Ophthalmol       Date:  2021-02-15       Impact factor: 5.258

10.  Lightweight Learning-Based Automatic Segmentation of Subretinal Blebs on Microscope-Integrated Optical Coherence Tomography Images.

Authors:  Zhenxi Song; Liangyu Xu; Jiang Wang; Reza Rasti; Ananth Sastry; Jianwei D Li; William Raynor; Joseph A Izatt; Cynthia A Toth; Lejla Vajzovic; Bin Deng; Sina Farsiu
Journal:  Am J Ophthalmol       Date:  2020-07-21       Impact factor: 5.258

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