| Literature DB >> 27200418 |
Wei Huang1, Yiyi Chen1, Andriy Fedorov2, Xia Li3, Guido H Jajamovich4, Dariya I Malyarenko5, Madhava P Aryal5, Peter S LaViolette6, Matthew J Oborski7, Finbarr O'Sullivan8, Richard G Abramson9, Kourosh Jafari-Khouzani10, Aneela Afzal1, Alina Tudorica1, Brendan Moloney1, Sandeep N Gupta3, Cecilia Besa4, Jayashree Kalpathy-Cramer10, James M Mountz7, Charles M Laymon7, Mark Muzi11, Kathleen Schmainda6, Yue Cao5, Thomas L Chenevert5, Bachir Taouli4, Thomas E Yankeelov9, Fiona Fennessy2, Xin Li1.
Abstract
Dynamic contrast-enhanced MRI (DCE-MRI) has been widely used in tumor detection and therapy response evaluation. Pharmacokinetic analysis of DCE-MRI time-course data allows estimation of quantitative imaging biomarkers such as Ktrans(rate constant for plasma/interstitium contrast reagent (CR) transfer) and ve (extravascular and extracellular volume fraction). However, the use of quantitative DCE-MRI in clinical prostate imaging islimited, with uncertainty in arterial input function (AIF, i.e., the time rate of change of the concentration of CR in the blood plasma) determination being one of the primary reasons. In this multicenter data analysis challenge to assess the effects of variations in AIF quantification on estimation of DCE-MRI parameters, prostate DCE-MRI data acquired at one center from 11 prostate cancer patients were shared among nine centers. Each center used its site-specific method to determine the individual AIF from each data set and submitted the results to the managing center. Along with a literature population averaged AIF, these AIFs and their reference-tissue-adjusted variants were used by the managing center to perform pharmacokinetic analysis of the DCE-MRI data sets using the Tofts model (TM). All other variables including tumor region of interest (ROI) definition and pre-contrast T1 were kept the same to evaluate parameter variations caused by AIF variations only. Considerable pharmacokinetic parameter variations were observed with the within-subject coefficient of variation (wCV) of Ktrans obtained with unadjusted AIFs as high as 0.74. AIF-caused variations were larger in Ktrans than ve and both were reduced when reference-tissue-adjusted AIFs were used. The parameter variations were largely systematic, resulting in nearly unchanged parametric map patterns. The CR intravasation rate constant, kep (= Ktrans/ve), was less sensitive to AIF variation than Ktrans (wCV for unadjusted AIFs: 0.45 for kepvs. 0.74 for Ktrans), suggesting that it might be a more robust imaging biomarker of prostate microvasculature than Ktrans.Entities:
Year: 2016 PMID: 27200418 PMCID: PMC4869732 DOI: 10.18383/j.tom.2015.00184
Source DB: PubMed Journal: Tomography ISSN: 2379-1381
Arterial Input Function (AIF) Quantification Methods by Participating Quantitative Imaging Network (QIN) Centers
| Center | Method |
|---|---|
| A single, fixed-size region of interest (ROI) was manually placed inside the femoral artery within the field of view (FOV). Averaged blood intensity time-course was extracted from the ROI, which is further converted to Cp(t) using the parameter values provided in the Materials and Methods section. | |
| GE's OncoQuant prototype tool was used, which includes the following: (1) AIF Search Region Slice Localization; (2) AIF Search Mask Localization; (3) AIF Detection Using Shape-Based Statistics; and (4) AIF Signal-to-Concentration Conversion. See ( | |
| Motion-corrected dynamic contrast-enhanced (DCE) series were processed using probabilistic-independent component analysis implemented in the FSL (FMRIB's Software Library, | |
| ROIs were manually placed inside the iliac arteries within the field of view (FOV) using Osirix (v5.8; Pixmeo, Switzerland). For each AIF determination, 1 ROI was drawn on 1 DCE frame, and its position was adjusted when necessary to account for interframe subject motion. Blood intensity time-courses were extracted from the ROIs. | |
| ROIs of 5 × 5 voxels were manually placed in 2 to 4 slices showing the highest artery conspicuity on maximum intensity projection displays of the baseline-subtracted DCE images. Voxel time-courses within the ROI were individually displayed on a 5 × 5 panel. Voxels with time-courses showing an AIF curve shape were then individually selected, and their locations and time-courses were automatically saved. | |
| ROIs were manually drawn on both left and right femoral arteries on the central 4 slices. To minimize the in-flow effect, the inferior and superior slices were excluded. Further, 20 voxels within the ROIs with the highest signal increases were determined by thresholding the histogram of intensity changes. The average signal intensity time curve of the 20 voxels yielded the final AIF signal intensity time-course. | |
| Images were loaded into PMOD 3.505 (PMOD Technologies Ltd.), a commercial software package. Images were examined to search for an artery near the lesion. A region including the identified artery was surveyed using the voxel browser of PMOD to identify an area with high signal intensity change, followed by AIF ROI delineation. | |
| An adapted version of a positron emission tomography (PET) AIF extraction scheme ( | |
| A seed point was placed manually inside an artery and then a region-growing method was applied to automatically select the AIF voxels. The intensity range for the region-growing method was set as 80% to 120% of that of the seed point, and the voxel distance from the seed was <10 voxels. Mean signal intensity time-course of the selected voxels was obtained. |
Figure 1.Individual AIFs extracted from one subject's dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) data by 9 participating Quantitative Imaging Network centers. The smaller circular region of interest (ROI) in the zoomed image inset (with the prostate in the center of the view) indicates the general location where blood signals were most frequently measured for the final AIF time-courses, and the larger elliptical ROI indicates the general location for the obturator muscle reference tissue ROI. Noticeable variations are evident for both the shape and magnitude of the AIF curves (A). The reference tissue-adjusted AIFs of the same subject (B). The agreement among the individually measured AIFs is clearly improved following the adjustment.
Figure 2.Grayscale image at the center shows a zoomed DCE-MRI slice of another subject. The cyan-colored ROI (indicated by the white arrow) demarks the lesion area used for subsequent TM modeling and parameter comparisons. Ktrans color maps generated by TM analysis of the DCE-MRI data using unadjusted (unadj.) AIFs from the 9 centers are shown on the left panels and those with reference tissue-adjusted (adj.) AIFs are shown on the right. All 18 panels used the same color scale.
Figure 3.Boxplots of the tumor mean Ktrans, ve, and kep parameters for the 11 subjects obtained with unadjusted (unadj.) and adjusted (adj.) AIFs from the 9 centers and the population-averaged GP AIF from the literature (28). The diamond and bar symbols represent the mean and median values, respectively. The body of the box is bounded by the upper 25% and lower 25% quartiles, representing the interquartile range of the middle 50% of the measurements. The upper and lower whiskers define the range of nonoutliers. The outliers are plotted as dots beyond the whiskers.
Figure 4.Column graphs of wCV for the Ktrans, ve, and kep parameters obtained with the unadjusted (unadj., shaded light gray) and adjusted (adj., dark gray) AIFs. The respective 95% confidence intervals (CIs) are shown as error bars.
Figure 5.Column graphs of ICC for the Ktrans, ve, and kep parameters obtained with the unadjusted (unadj., shaded light gray) and adjusted (adj., dark gray) AIFs. The respective 95% CIs are shown as error bars.
CCC Values of the Ktrans Parameter Obtained With Unadjusted and Adjusted AIFs
| QIN1 | QIN2 | QIN 3 | QIN4 | QIN5 | QIN6 | QIN7 | QIN8 | QIN9 | GP | |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.185 | 0.759 | 0.825 | 0.501 | 0.755 | 0.747 | 0.412 | 0.941 | 0.049 | ||
| 0.228 | 0.395 | 0.186 | 0.082 | 0.241 | 0.297 | 0.159 | 0.189 | 0.047 | ||
| 0.726 | 0.507 | 0.645 | 0.336 | 0.836 | 0.889 | 0.301 | 0.732 | 0.083 | ||
| 0.835 | 0.267 | 0.637 | 0.591 | 0.769 | 0.645 | 0.515 | 0.750 | 0.084 | ||
| 0.776 | 0.179 | 0.531 | 0.880 | 0.472 | 0.367 | 0.307 | 0.445 | 0.223 | ||
| 0.780 | 0.370 | 0.896 | 0.744 | 0.612 | 0.944 | 0.209 | 0.639 | 0.115 | ||
| 0.755 | 0.376 | 0.887 | 0.662 | 0.965 | 0.548 | 0.262 | 0.612 | 0.105 | ||
| 0.825 | 0.250 | 0.621 | 0.882 | 0.689 | 0.739 | 0.666 | 0.353 | 0.107 | ||
| 0.897 | 0.130 | 0.610 | 0.720 | 0.605 | 0.747 | 0.507 | 0.655 | 0.031 | ||
| 0.210 | 0.082 | 0.212 | 0.287 | 0.297 | 0.393 | 0.300 | 0.253 | 0.104 |
CCC: concordance correlation coefficient; values from unadjusted AIFs are presented in the top right triangle and those from reference-tissue-adjusted AIFs are presented in bottom left triangle; Ktrans: rate constant for plasma/interstitium contrast reagent (CR) transfer.
CCC Values of the ve Parameter Obtained With Unadjusted and Adjusted AIFs
| QIN1 | QIN2 | QIN3 | QIN4 | QIN5 | QIN6 | QIN7 | QIN8 | QIN9 | GP | |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.458 | 0.873 | 0.696 | 0.822 | 0.911 | 0.890 | 0.713 | 0.913 | 0.732 | ||
| 0.942 | 0.473 | 0.369 | 0.347 | 0.421 | 0.453 | 0.538 | 0.535 | 0.334 | ||
| 0.981 | 0.969 | 0.666 | 0.587 | 0.868 | 0.886 | 0.676 | 0.745 | 0.510 | ||
| 0.973 | 0.965 | 0.971 | 0.545 | 0.737 | 0.782 | 0.767 | 0.538 | 0.530 | ||
| 0.726 | 0.668 | 0.693 | 0.803 | 0.787 | 0.719 | 0.591 | 0.733 | 0.936 | ||
| 0.982 | 0.955 | 0.980 | 0.951 | 0.622 | 0.986 | 0.797 | 0.713 | 0.737 | ||
| 0.993 | 0.965 | 0.992 | 0.982 | 0.984 | 0.732 | 0.838 | 0.696 | 0.688 | ||
| 0.979 | 0.951 | 0.965 | 0.954 | 0.973 | 0.690 | 0.985 | 0.534 | 0.619 | ||
| 0.952 | 0.820 | 0.913 | 0.887 | 0.924 | 0.703 | 0.929 | 0.900 | 0.621 | ||
| 0.929 | 0.879 | 0.949 | 0.873 | 0.933 | 0.554 | 0.931 | 0.924 | 0.880 |
CCC: concordance correlation coefficient; values from unadjusted AIFs are presented in the top right triangle and those from reference-tissue-adjusted AIFs are presented in bottom left triangle; ve: extravascular and extracellular volume fraction.
CCC Values of the kep Parameter Obtained With Unadjusted and Adjusted AIFs
| QIN1 | QIN2 | QIN3 | QIN4 | QIN5 | QIN6 | QIN7 | QIN8 | QIN9 | GP | |
|---|---|---|---|---|---|---|---|---|---|---|
| 0.400 | 0.649 | 0.881 | 0.894 | 0.792 | 0.745 | 0.872 | 0.891 | 0.319 | ||
| 0.303 | 0.620 | 0.339 | 0.327 | 0.553 | 0.645 | 0.407 | 0.335 | 0.145 | ||
| 0.752 | 0.605 | 0.591 | 0.591 | 0.934 | 0.942 | 0.690 | 0.465 | 0.356 | ||
| 0.872 | 0.282 | 0.586 | 0.932 | 0.684 | 0.595 | 0.866 | 0.788 | 0.352 | ||
| 0.883 | 0.247 | 0.569 | 0.965 | 0.680 | 0.615 | 0.856 | 0.811 | 0.442 | ||
| 0.775 | 0.427 | 0.856 | 0.677 | 0.656 | 0.957 | 0.705 | 0.579 | 0.385 | ||
| 0.748 | 0.525 | 0.910 | 0.614 | 0.938 | 0.616 | 0.696 | 0.519 | 0.344 | ||
| 0.867 | 0.308 | 0.656 | 0.873 | 0.683 | 0.856 | 0.697 | 0.722 | 0.346 | ||
| 0.925 | 0.231 | 0.642 | 0.783 | 0.542 | 0.812 | 0.547 | 0.738 | 0.182 | ||
| 0.318 | 0.129 | 0.248 | 0.390 | 0.391 | 0.438 | 0.348 | 0.350 | 0.171 |
CCC: concordance correlation coefficient; values from unadjusted AIFs are presented in the top right triangle and those from reference-tissue-adjusted AIFs are presented in bottom left triangle; kep (= Ktrans/ve): CR intravasation rate constant.
Figure 6.Bland–Altman plots are shown to demonstrate agreement in Ktrans for AIF pairs with the largest (A and B) and smallest (C and D) CCC values within the unadjusted (A and C) and adjusted (B and D) AIF groups. The two solid horizontal lines represent the upper and lower limits of the 95% CI, whereas the dotted horizontal line represents the mean value of Ktrans differences between the two measurements.