Literature DB >> 27152023

Interactions of a fungal lytic polysaccharide monooxygenase with β-glucan substrates and cellobiose dehydrogenase.

Gaston Courtade1, Reinhard Wimmer2, Åsmund K Røhr3, Marita Preims4, Alfons K G Felice4, Maria Dimarogona5, Gustav Vaaje-Kolstad3, Morten Sørlie3, Mats Sandgren5, Roland Ludwig4, Vincent G H Eijsink6, Finn Lillelund Aachmann7.   

Abstract

Lytic polysaccharide monooxygenases (LPMOs) are copper-dependent enzymes that catalyze oxidative cleavage of glycosidic bonds using molecular oxygen and an external electron donor. We have used NMR and isothermal titration calorimetry (ITC) to study the interactions of a broad-specificity fungal LPMO, NcLPMO9C, with various substrates and with cellobiose dehydrogenase (CDH), a known natural supplier of electrons. The NMR studies revealed interactions with cellohexaose that center around the copper site. NMR studies with xyloglucans, i.e., branched β-glucans, showed an extended binding surface compared with cellohexaose, whereas ITC experiments showed slightly higher affinity and a different thermodynamic signature of binding. The ITC data also showed that although the copper ion alone hardly contributes to affinity, substrate binding is enhanced for metal-loaded enzymes that are supplied with cyanide, a mimic of O2 (-) Studies with CDH and its isolated heme b cytochrome domain unambiguously showed that the cytochrome domain of CDH interacts with the copper site of the LPMO and that substrate binding precludes interaction with CDH. Apart from providing insights into enzyme-substrate interactions in LPMOs, the present observations shed new light on possible mechanisms for electron supply during LPMO action.

Entities:  

Keywords:  LPMO; cellobiose dehydrogenase; cellulose; lytic polysaccharide monooxygenase; xyloglucan

Mesh:

Substances:

Year:  2016        PMID: 27152023      PMCID: PMC4889390          DOI: 10.1073/pnas.1602566113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   12.779


  47 in total

1.  On the value of c: can low affinity systems be studied by isothermal titration calorimetry?

Authors:  W Bruce Turnbull; Antonio H Daranas
Journal:  J Am Chem Soc       Date:  2003-12-03       Impact factor: 15.419

2.  PRODRG: a tool for high-throughput crystallography of protein-ligand complexes.

Authors:  Alexander W Schüttelkopf; Daan M F van Aalten
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-07-21

3.  MOLMOL: a program for display and analysis of macromolecular structures.

Authors:  R Koradi; M Billeter; K Wüthrich
Journal:  J Mol Graph       Date:  1996-02

4.  Structural and Functional Characterization of a Lytic Polysaccharide Monooxygenase with Broad Substrate Specificity.

Authors:  Anna S Borisova; Trine Isaksen; Maria Dimarogona; Abhishek A Kognole; Geir Mathiesen; Anikó Várnai; Åsmund K Røhr; Christina M Payne; Morten Sørlie; Mats Sandgren; Vincent G H Eijsink
Journal:  J Biol Chem       Date:  2015-07-15       Impact factor: 5.157

5.  Rapid measurement of binding constants and heats of binding using a new titration calorimeter.

Authors:  T Wiseman; S Williston; J F Brandts; L N Lin
Journal:  Anal Biochem       Date:  1989-05-15       Impact factor: 3.365

6.  Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation.

Authors:  N A Farrow; R Muhandiram; A U Singer; S M Pascal; C M Kay; G Gish; S E Shoelson; T Pawson; J D Forman-Kay; L E Kay
Journal:  Biochemistry       Date:  1994-05-17       Impact factor: 3.162

7.  Characterization of the two Neurospora crassa cellobiose dehydrogenases and their connection to oxidative cellulose degradation.

Authors:  Christoph Sygmund; Daniel Kracher; Stefan Scheiblbrandner; Kawah Zahma; Alfons K G Felice; Wolfgang Harreither; Roman Kittl; Roland Ludwig
Journal:  Appl Environ Microbiol       Date:  2012-06-22       Impact factor: 4.792

8.  Insights into the oxidative degradation of cellulose by a copper metalloenzyme that exploits biomass components.

Authors:  R Jason Quinlan; Matt D Sweeney; Leila Lo Leggio; Harm Otten; Jens-Christian N Poulsen; Katja Salomon Johansen; Kristian B R M Krogh; Christian Isak Jørgensen; Morten Tovborg; Annika Anthonsen; Theodora Tryfona; Clive P Walter; Paul Dupree; Feng Xu; Gideon J Davies; Paul H Walton
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-29       Impact factor: 11.205

9.  Substrate specificity and regioselectivity of fungal AA9 lytic polysaccharide monooxygenases secreted by Podospora anserina.

Authors:  Chloé Bennati-Granier; Sona Garajova; Charlotte Champion; Sacha Grisel; Mireille Haon; Simeng Zhou; Mathieu Fanuel; David Ropartz; Hélène Rogniaux; Isabelle Gimbert; Eric Record; Jean-Guy Berrin
Journal:  Biotechnol Biofuels       Date:  2015-06-20       Impact factor: 6.040

10.  Structure and boosting activity of a starch-degrading lytic polysaccharide monooxygenase.

Authors:  Leila Lo Leggio; Thomas J Simmons; Jens-Christian N Poulsen; Kristian E H Frandsen; Glyn R Hemsworth; Mary A Stringer; Pernille von Freiesleben; Morten Tovborg; Katja S Johansen; Leonardo De Maria; Paul V Harris; Chee-Leong Soong; Paul Dupree; Theodora Tryfona; Nicolas Lenfant; Bernard Henrissat; Gideon J Davies; Paul H Walton
Journal:  Nat Commun       Date:  2015-01-22       Impact factor: 14.919

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  37 in total

1.  The carbohydrate-binding module and linker of a modular lytic polysaccharide monooxygenase promote localized cellulose oxidation.

Authors:  Gaston Courtade; Zarah Forsberg; Ellinor B Heggset; Vincent G H Eijsink; Finn L Aachmann
Journal:  J Biol Chem       Date:  2018-07-02       Impact factor: 5.157

2.  Insights into an unusual Auxiliary Activity 9 family member lacking the histidine brace motif of lytic polysaccharide monooxygenases.

Authors:  Kristian E H Frandsen; Morten Tovborg; Christian I Jørgensen; Nikolaj Spodsberg; Marie-Noëlle Rosso; Glyn R Hemsworth; Elspeth F Garman; Geoffrey W Grime; Jens-Christian N Poulsen; Tanveer S Batth; Shingo Miyauchi; Anna Lipzen; Chris Daum; Igor V Grigoriev; Katja S Johansen; Bernard Henrissat; Jean-Guy Berrin; Leila Lo Leggio
Journal:  J Biol Chem       Date:  2019-08-30       Impact factor: 5.157

3.  Structural determinants of bacterial lytic polysaccharide monooxygenase functionality.

Authors:  Zarah Forsberg; Bastien Bissaro; Jonathan Gullesen; Bjørn Dalhus; Gustav Vaaje-Kolstad; Vincent G H Eijsink
Journal:  J Biol Chem       Date:  2017-12-08       Impact factor: 5.157

4.  Engineering chitinolytic activity into a cellulose-active lytic polysaccharide monooxygenase provides insights into substrate specificity.

Authors:  Marianne Slang Jensen; Geir Klinkenberg; Bastien Bissaro; Piotr Chylenski; Gustav Vaaje-Kolstad; Hans Fredrik Kvitvang; Guro Kruge Nærdal; Håvard Sletta; Zarah Forsberg; Vincent G H Eijsink
Journal:  J Biol Chem       Date:  2019-10-27       Impact factor: 5.157

5.  Reactivity of O2 versus H2O2 with polysaccharide monooxygenases.

Authors:  John A Hangasky; Anthony T Iavarone; Michael A Marletta
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-23       Impact factor: 11.205

6.  Methylation of the N-terminal histidine protects a lytic polysaccharide monooxygenase from auto-oxidative inactivation.

Authors:  Dejan M Petrović; Bastien Bissaro; Piotr Chylenski; Morten Skaugen; Morten Sørlie; Marianne S Jensen; Finn L Aachmann; Gaston Courtade; Anikó Várnai; Vincent G H Eijsink
Journal:  Protein Sci       Date:  2018-09       Impact factor: 6.725

7.  Crystallization of a fungal lytic polysaccharide monooxygenase expressed from glycoengineered Pichia pastoris for X-ray and neutron diffraction.

Authors:  William B O'Dell; Paul D Swartz; Kevin L Weiss; Flora Meilleur
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2017-01-19       Impact factor: 1.056

8.  Comparison of three seemingly similar lytic polysaccharide monooxygenases from Neurospora crassa suggests different roles in plant biomass degradation.

Authors:  Dejan M Petrović; Anikó Várnai; Maria Dimarogona; Geir Mathiesen; Mats Sandgren; Bjørge Westereng; Vincent G H Eijsink
Journal:  J Biol Chem       Date:  2019-08-20       Impact factor: 5.157

Review 9.  Oxygen Activation by Cu LPMOs in Recalcitrant Carbohydrate Polysaccharide Conversion to Monomer Sugars.

Authors:  Katlyn K Meier; Stephen M Jones; Thijs Kaper; Henrik Hansson; Martijn J Koetsier; Saeid Karkehabadi; Edward I Solomon; Mats Sandgren; Bradley Kelemen
Journal:  Chem Rev       Date:  2017-11-20       Impact factor: 60.622

Review 10.  Lytic polysaccharide monooxygenases: a crystallographer's view on a new class of biomass-degrading enzymes.

Authors:  Kristian E H Frandsen; Leila Lo Leggio
Journal:  IUCrJ       Date:  2016-10-14       Impact factor: 4.769

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