Literature DB >> 31431506

Comparison of three seemingly similar lytic polysaccharide monooxygenases from Neurospora crassa suggests different roles in plant biomass degradation.

Dejan M Petrović1, Anikó Várnai2, Maria Dimarogona3,4, Geir Mathiesen1, Mats Sandgren3, Bjørge Westereng1, Vincent G H Eijsink1.   

Abstract

Many fungi produce multiple lytic polysaccharide monooxygenases (LPMOs) with seemingly similar functions, but the biological reason for this multiplicity remains unknown. To address this question, here we carried out comparative structural and functional characterizations of three cellulose-active C4-oxidizing family AA9 LPMOs from the fungus Neurospora crassa, NcLPMO9A (NCU02240), NcLPMO9C (NCU02916), and NcLPMO9D (NCU01050). We solved the three-dimensional structure of copper-bound NcLPMO9A at 1.6-Å resolution and found that NcLPMO9A and NcLPMO9C, containing a CBM1 carbohydrate-binding module, bind cellulose more strongly and were less susceptible to inactivation than NcLPMO9D, which lacks a CBM. All three LPMOs were active on tamarind xyloglucan and konjac glucomannan, generating similar products but clearly differing in activity levels. Importantly, in some cases, the addition of phosphoric acid-swollen cellulose (PASC) had a major effect on activity: NcLPMO9A was active on xyloglucan only in the presence of PASC, and PASC enhanced NcLPMO9D activity on glucomannan. Interestingly, the three enzymes also exhibited large differences in their interactions with enzymatic electron donors, which could reflect that they are optimized to act with different reducing partners. All three enzymes efficiently used H2O2 as a cosubstrate, yielding product profiles identical to those obtained in O2-driven reactions with PASC, xyloglucan, or glucomannan. Our results indicate that seemingly similar LPMOs act preferentially on different types of copolymeric substructures in the plant cell wall, possibly because these LPMOs are functionally adapted to distinct niches differing in the types of available reductants.
© 2019 Petrović et al.

Entities:  

Keywords:  AA9; ascorbic acid; dehydrogenase; gene multiplicity; hydrogen peroxide; lytic polysaccharide monooxygenase (LPMO); plant cell wall; protein stability; substrate binding; substrate specificity

Mesh:

Substances:

Year:  2019        PMID: 31431506      PMCID: PMC6791328          DOI: 10.1074/jbc.RA119.008196

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  75 in total

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2.  Cloning, sequence analysis and heterologous expression in Pichia pastoris of a gene encoding a thermostable cellobiose dehydrogenase from Myriococcum thermophilum.

Authors:  Marcel Zámocký; Christina Schümann; Christoph Sygmund; John O'Callaghan; Alan D W Dobson; Roland Ludwig; Dietmar Haltrich; Clemens K Peterbauer
Journal:  Protein Expr Purif       Date:  2008-02-29       Impact factor: 1.650

3.  Simultaneous analysis of C1 and C4 oxidized oligosaccharides, the products of lytic polysaccharide monooxygenases acting on cellulose.

Authors:  Bjørge Westereng; Magnus Ø Arntzen; Finn L Aachmann; Anikó Várnai; Vincent G H Eijsink; Jane Wittrup Agger
Journal:  J Chromatogr A       Date:  2016-03-25       Impact factor: 4.759

4.  Reactivity of O2 versus H2O2 with polysaccharide monooxygenases.

Authors:  John A Hangasky; Anthony T Iavarone; Michael A Marletta
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-23       Impact factor: 11.205

Review 5.  Oxygen Activation by Cu LPMOs in Recalcitrant Carbohydrate Polysaccharide Conversion to Monomer Sugars.

Authors:  Katlyn K Meier; Stephen M Jones; Thijs Kaper; Henrik Hansson; Martijn J Koetsier; Saeid Karkehabadi; Edward I Solomon; Mats Sandgren; Bradley Kelemen
Journal:  Chem Rev       Date:  2017-11-20       Impact factor: 60.622

6.  Characterization of the two Neurospora crassa cellobiose dehydrogenases and their connection to oxidative cellulose degradation.

Authors:  Christoph Sygmund; Daniel Kracher; Stefan Scheiblbrandner; Kawah Zahma; Alfons K G Felice; Wolfgang Harreither; Roman Kittl; Roland Ludwig
Journal:  Appl Environ Microbiol       Date:  2012-06-22       Impact factor: 4.792

7.  Insights into the oxidative degradation of cellulose by a copper metalloenzyme that exploits biomass components.

Authors:  R Jason Quinlan; Matt D Sweeney; Leila Lo Leggio; Harm Otten; Jens-Christian N Poulsen; Katja Salomon Johansen; Kristian B R M Krogh; Christian Isak Jørgensen; Morten Tovborg; Annika Anthonsen; Theodora Tryfona; Clive P Walter; Paul Dupree; Feng Xu; Gideon J Davies; Paul H Walton
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-29       Impact factor: 11.205

8.  Discovery of the combined oxidative cleavage of plant xylan and cellulose by a new fungal polysaccharide monooxygenase.

Authors:  Matthias Frommhagen; Stefano Sforza; Adrie H Westphal; Jaap Visser; Sandra W A Hinz; Martijn J Koetsier; Willem J H van Berkel; Harry Gruppen; Mirjam A Kabel
Journal:  Biotechnol Biofuels       Date:  2015-07-17       Impact factor: 6.040

9.  A C4-oxidizing lytic polysaccharide monooxygenase cleaving both cellulose and cello-oligosaccharides.

Authors:  Trine Isaksen; Bjørge Westereng; Finn L Aachmann; Jane W Agger; Daniel Kracher; Roman Kittl; Roland Ludwig; Dietmar Haltrich; Vincent G H Eijsink; Svein J Horn
Journal:  J Biol Chem       Date:  2013-12-09       Impact factor: 5.486

Review 10.  Distinct Substrate Specificities and Electron-Donating Systems of Fungal Lytic Polysaccharide Monooxygenases.

Authors:  Matthias Frommhagen; Adrie H Westphal; Willem J H van Berkel; Mirjam A Kabel
Journal:  Front Microbiol       Date:  2018-05-29       Impact factor: 5.640

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  15 in total

Review 1.  Functional characterization of cellulose-degrading AA9 lytic polysaccharide monooxygenases and their potential exploitation.

Authors:  Ruiqin Zhang
Journal:  Appl Microbiol Biotechnol       Date:  2020-02-19       Impact factor: 4.813

2.  A trimodular bacterial enzyme combining hydrolytic activity with oxidative glycosidic bond cleavage efficiently degrades chitin.

Authors:  Sophanit Mekasha; Tina Rise Tuveng; Fatemeh Askarian; Swati Choudhary; Claudia Schmidt-Dannert; Axel Niebisch; Jan Modregger; Gustav Vaaje-Kolstad; Vincent G H Eijsink
Journal:  J Biol Chem       Date:  2020-05-12       Impact factor: 5.157

3.  Enhanced in situ H2O2 production explains synergy between an LPMO with a cellulose-binding domain and a single-domain LPMO.

Authors:  Anton A Stepnov; Vincent G H Eijsink; Zarah Forsberg
Journal:  Sci Rep       Date:  2022-04-12       Impact factor: 4.379

4.  Chimeric Cellobiose Dehydrogenases Reveal the Function of Cytochrome Domain Mobility for the Electron Transfer to Lytic Polysaccharide Monooxygenase.

Authors:  Alfons K G Felice; Christian Schuster; Alan Kadek; Frantisek Filandr; Christophe V F P Laurent; Stefan Scheiblbrandner; Lorenz Schwaiger; Franziska Schachinger; Daniel Kracher; Christoph Sygmund; Petr Man; Petr Halada; Chris Oostenbrink; Roland Ludwig
Journal:  ACS Catal       Date:  2020-12-24       Impact factor: 13.700

5.  Genomic and transcriptomic analysis of the thermophilic lignocellulose-degrading fungus Thielavia terrestris LPH172.

Authors:  Monika Tõlgo; Silvia Hüttner; Peter Rugbjerg; Nguyen Thanh Thuy; Vu Nguyen Thanh; Johan Larsbrink; Lisbeth Olsson
Journal:  Biotechnol Biofuels       Date:  2021-06-03       Impact factor: 6.040

6.  Synthesis of glycoconjugates utilizing the regioselectivity of a lytic polysaccharide monooxygenase.

Authors:  Bjørge Westereng; Stjepan K Kračun; Shaun Leivers; Magnus Ø Arntzen; Finn L Aachmann; Vincent G H Eijsink
Journal:  Sci Rep       Date:  2020-08-06       Impact factor: 4.379

7.  Controlled depolymerization of cellulose by light-driven lytic polysaccharide oxygenases.

Authors:  Bastien Bissaro; Eirik Kommedal; Åsmund K Røhr; Vincent G H Eijsink
Journal:  Nat Commun       Date:  2020-02-14       Impact factor: 14.919

Review 8.  Enzymatic processing of lignocellulosic biomass: principles, recent advances and perspectives.

Authors:  Heidi Østby; Line Degn Hansen; Svein J Horn; Vincent G H Eijsink; Anikó Várnai
Journal:  J Ind Microbiol Biotechnol       Date:  2020-08-25       Impact factor: 3.346

9.  Novel molecular biological tools for the efficient expression of fungal lytic polysaccharide monooxygenases in Pichia pastoris.

Authors:  Lukas Rieder; Katharina Ebner; Anton Glieder; Morten Sørlie
Journal:  Biotechnol Biofuels       Date:  2021-05-27       Impact factor: 6.040

10.  Configuration of active site segments in lytic polysaccharide monooxygenases steers oxidative xyloglucan degradation.

Authors:  Peicheng Sun; Christophe V F P Laurent; Stefan Scheiblbrandner; Matthias Frommhagen; Dimitrios Kouzounis; Mark G Sanders; Willem J H van Berkel; Roland Ludwig; Mirjam A Kabel
Journal:  Biotechnol Biofuels       Date:  2020-05-29       Impact factor: 7.670

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