Literature DB >> 26923372

Q-space trajectory imaging for multidimensional diffusion MRI of the human brain.

Carl-Fredrik Westin1, Hans Knutsson2, Ofer Pasternak3, Filip Szczepankiewicz4, Evren Özarslan5, Danielle van Westen6, Cecilia Mattisson7, Mats Bogren7, Lauren J O'Donnell3, Marek Kubicki3, Daniel Topgaard8, Markus Nilsson9.   

Abstract

This work describes a new diffusion MR framework for imaging and modeling of microstructure that we call q-space trajectory imaging (QTI). The QTI framework consists of two parts: encoding and modeling. First we propose q-space trajectory encoding, which uses time-varying gradients to probe a trajectory in q-space, in contrast to traditional pulsed field gradient sequences that attempt to probe a point in q-space. Then we propose a microstructure model, the diffusion tensor distribution (DTD) model, which takes advantage of additional information provided by QTI to estimate a distributional model over diffusion tensors. We show that the QTI framework enables microstructure modeling that is not possible with the traditional pulsed gradient encoding as introduced by Stejskal and Tanner. In our analysis of QTI, we find that the well-known scalar b-value naturally extends to a tensor-valued entity, i.e., a diffusion measurement tensor, which we call the b-tensor. We show that b-tensors of rank 2 or 3 enable estimation of the mean and covariance of the DTD model in terms of a second order tensor (the diffusion tensor) and a fourth order tensor. The QTI framework has been designed to improve discrimination of the sizes, shapes, and orientations of diffusion microenvironments within tissue. We derive rotationally invariant scalar quantities describing intuitive microstructural features including size, shape, and orientation coherence measures. To demonstrate the feasibility of QTI on a clinical scanner, we performed a small pilot study comparing a group of five healthy controls with five patients with schizophrenia. The parameter maps derived from QTI were compared between the groups, and 9 out of the 14 parameters investigated showed differences between groups. The ability to measure and model the distribution of diffusion tensors, rather than a quantity that has already been averaged within a voxel, has the potential to provide a powerful paradigm for the study of complex tissue architecture.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  DDE; DTI; Diffusion MRI; Diffusion tensor distribution; Microscopic anisotropy; Microscopic fractional anisotropy μFA; QTI; SDE; TDE; q-space; q-space trajectory

Mesh:

Year:  2016        PMID: 26923372      PMCID: PMC4916005          DOI: 10.1016/j.neuroimage.2016.02.039

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  58 in total

1.  Analysis of partial volume effects in diffusion-tensor MRI.

Authors:  A L Alexander; K M Hasan; M Lazar; J S Tsuruda; D L Parker
Journal:  Magn Reson Med       Date:  2001-05       Impact factor: 4.668

2.  Experimental determination of pore shape and size using q-space NMR microscopy in the long diffusion-time limit.

Authors:  Daniel Topgaard; Olle Söderman
Journal:  Magn Reson Imaging       Date:  2003-01       Impact factor: 2.546

Review 3.  Diffusion-tensor MRI: theory, experimental design and data analysis - a technical review.

Authors:  Peter J Basser; Derek K Jones
Journal:  NMR Biomed       Date:  2002 Nov-Dec       Impact factor: 4.044

4.  Oscillating gradient measurements of water diffusion in normal and globally ischemic rat brain.

Authors:  Mark D Does; Edward C Parsons; John C Gore
Journal:  Magn Reson Med       Date:  2003-02       Impact factor: 4.668

5.  Characterizing non-Gaussian diffusion by using generalized diffusion tensors.

Authors:  Chunlei Liu; Roland Bammer; Burak Acar; Michael E Moseley
Journal:  Magn Reson Med       Date:  2004-05       Impact factor: 4.668

6.  Fiber composition of the human corpus callosum.

Authors:  F Aboitiz; A B Scheibel; R S Fisher; E Zaidel
Journal:  Brain Res       Date:  1992-12-11       Impact factor: 3.252

7.  Q-ball imaging.

Authors:  David S Tuch
Journal:  Magn Reson Med       Date:  2004-12       Impact factor: 4.668

8.  (Mathematical) Necessary conditions for the selection of gradient vectors in DTI.

Authors:  Alpay Ozcan
Journal:  J Magn Reson       Date:  2005-02       Impact factor: 2.229

9.  Dysmyelination revealed through MRI as increased radial (but unchanged axial) diffusion of water.

Authors:  Sheng-Kwei Song; Shu-Wei Sun; Michael J Ramsbottom; Chen Chang; John Russell; Anne H Cross
Journal:  Neuroimage       Date:  2002-11       Impact factor: 6.556

10.  Diffusional kurtosis imaging: the quantification of non-gaussian water diffusion by means of magnetic resonance imaging.

Authors:  Jens H Jensen; Joseph A Helpern; Anita Ramani; Hanzhang Lu; Kyle Kaczynski
Journal:  Magn Reson Med       Date:  2005-06       Impact factor: 4.668

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  95 in total

Review 1.  Challenges in diffusion MRI tractography - Lessons learned from international benchmark competitions.

Authors:  Kurt G Schilling; Alessandro Daducci; Klaus Maier-Hein; Cyril Poupon; Jean-Christophe Houde; Vishwesh Nath; Adam W Anderson; Bennett A Landman; Maxime Descoteaux
Journal:  Magn Reson Imaging       Date:  2018-11-29       Impact factor: 2.546

2.  A comparative study of the sensitivity of diffusion-related parameters obtained from diffusion tensor imaging, diffusional kurtosis imaging, q-space analysis and bi-exponential modelling in the early disease course (24 h) of hyperacute (6 h) ischemic stroke patients.

Authors:  Gaëtan Duchêne; Frank Peeters; André Peeters; Thierry Duprez
Journal:  MAGMA       Date:  2017-03-06       Impact factor: 2.310

3.  Diffusion MRI microstructural models in the cervical spinal cord - Application, normative values, and correlations with histological analysis.

Authors:  Kurt G Schilling; Samantha By; Haley R Feiler; Bailey A Box; Kristin P O'Grady; Atlee Witt; Bennett A Landman; Seth A Smith
Journal:  Neuroimage       Date:  2019-07-19       Impact factor: 6.556

Review 4.  Studying neuroanatomy using MRI.

Authors:  Jason P Lerch; André J W van der Kouwe; Armin Raznahan; Tomáš Paus; Heidi Johansen-Berg; Karla L Miller; Stephen M Smith; Bruce Fischl; Stamatios N Sotiropoulos
Journal:  Nat Neurosci       Date:  2017-02-23       Impact factor: 24.884

Review 5.  Advances in computational and statistical diffusion MRI.

Authors:  Lauren J O'Donnell; Alessandro Daducci; Demian Wassermann; Christophe Lenglet
Journal:  NMR Biomed       Date:  2017-11-14       Impact factor: 4.044

6.  MK-curve - Characterizing the relation between mean kurtosis and alterations in the diffusion MRI signal.

Authors:  Fan Zhang; Lipeng Ning; Lauren J O'Donnell; Ofer Pasternak
Journal:  Neuroimage       Date:  2019-04-10       Impact factor: 6.556

7.  Oscillating diffusion-encoding with a high gradient-amplitude and high slew-rate head-only gradient for human brain imaging.

Authors:  Ek T Tan; Robert Y Shih; Jhimli Mitra; Tim Sprenger; Yihe Hua; Chitresh Bhushan; Matt A Bernstein; Jennifer A McNab; J Kevin DeMarco; Vincent B Ho; Thomas K F Foo
Journal:  Magn Reson Med       Date:  2020-02-03       Impact factor: 4.668

8.  Effective potential for magnetic resonance measurements of restricted diffusion.

Authors:  Evren Özarslan; Cem Yolcu; Magnus Herberthson; Carl-Fredrik Westin; Hans Knutsson
Journal:  Front Phys       Date:  2017-12-19

9.  In vivo magnetic resonance imaging and spectroscopy. Technological advances and opportunities for applications continue to abound.

Authors:  Peter van Zijl; Linda Knutsson
Journal:  J Magn Reson       Date:  2019-07-09       Impact factor: 2.229

10.  The link between diffusion MRI and tumor heterogeneity: Mapping cell eccentricity and density by diffusional variance decomposition (DIVIDE).

Authors:  Filip Szczepankiewicz; Danielle van Westen; Elisabet Englund; Carl-Fredrik Westin; Freddy Ståhlberg; Jimmy Lätt; Pia C Sundgren; Markus Nilsson
Journal:  Neuroimage       Date:  2016-07-20       Impact factor: 6.556

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