Literature DB >> 30978492

MK-curve - Characterizing the relation between mean kurtosis and alterations in the diffusion MRI signal.

Fan Zhang1, Lipeng Ning2, Lauren J O'Donnell3, Ofer Pasternak4.   

Abstract

Diffusion kurtosis imaging (DKI) is a diffusion MRI (dMRI) technique to quantify brain microstructural properties. While DKI measures are sensitive to tissue alterations, they are also affected by signal alterations caused by imaging artifacts such as noise, motion and Gibbs ringing. Consequently, DKI often yields output parameter values (e.g. mean kurtosis; MK) that are implausible. These include implausible values that are outside of the range dictated by physics/biology, and visually apparent implausible values that form unexpected discontinuities, being too high or too low comparing with their neighborhood. These implausible values will introduce bias into any following data analyses (e.g. between-population statistical computation). Existing studies have attempted to correct implausible DKI parameter values in multiple ways; however, these approaches are not always effective. In this study, we propose a novel method for detecting and correcting voxels with implausible values to enable improved DKI parameter estimation. In particular, we focus on MK parameter estimation. We first characterize the relation between MK and alterations in the dMRI signal including diffusion weighted images (DWIs) and the baseline (b0) images. This is done by calculating MK for a range of synthetic DWI or b0 for each voxel, and generating curves (MK-curve) representing how alterations to the input dMRI signals affect the resulting output MK. We find that voxels with implausible MK values are more likely caused by artifacts in the b0 images than artifacts in DWIs with higher b-values. Accordingly, two characteristic b0 values, which define a range of synthetic b0 values that generate implausible MK values, are identified on the MK-curve. Based on this characterization, we propose an automatic approach for detection of voxels with implausible MK values by comparing a voxel's original b0 signal to the identified two characteristic b0 values, along with a correction strategy to replace the original b0 in each detected implausible voxel with a synthetic b0 value computed from the MK-curve. We evaluate the method on a DKI phantom dataset and dMRI datasets from the Human Connectome Project (HCP), and we compare the proposed correction method with other previously proposed correction methods. Results show that our proposed method is able to identify and correct most voxels with implausible DKI parameter values as well as voxels with implausible diffusion tensor parameter values.
Copyright © 2019 Elsevier Inc. All rights reserved.

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Year:  2019        PMID: 30978492      PMCID: PMC6592693          DOI: 10.1016/j.neuroimage.2019.04.015

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  37 in total

1.  Three-dimensional characterization of non-gaussian water diffusion in humans using diffusion kurtosis imaging.

Authors:  Hanzhang Lu; Jens H Jensen; Anita Ramani; Joseph A Helpern
Journal:  NMR Biomed       Date:  2006-04       Impact factor: 4.044

2.  Towards better MR characterization of neural tissues using directional diffusion kurtosis analysis.

Authors:  Edward S Hui; Matthew M Cheung; Liqun Qi; Ed X Wu
Journal:  Neuroimage       Date:  2008-04-30       Impact factor: 6.556

3.  Does diffusion kurtosis imaging lead to better neural tissue characterization? A rodent brain maturation study.

Authors:  Matthew M Cheung; Edward S Hui; Kevin C Chan; Joseph A Helpern; Liqun Qi; Ed X Wu
Journal:  Neuroimage       Date:  2008-12-25       Impact factor: 6.556

4.  Statistical assessment of non-Gaussian diffusion models.

Authors:  Anders Kristoffersen
Journal:  Magn Reson Med       Date:  2011-04-26       Impact factor: 4.668

5.  Diffusional kurtosis imaging: the quantification of non-gaussian water diffusion by means of magnetic resonance imaging.

Authors:  Jens H Jensen; Joseph A Helpern; Anita Ramani; Hanzhang Lu; Kyle Kaczynski
Journal:  Magn Reson Med       Date:  2005-06       Impact factor: 4.668

6.  Estimation of tensors and tensor-derived measures in diffusional kurtosis imaging.

Authors:  Ali Tabesh; Jens H Jensen; Babak A Ardekani; Joseph A Helpern
Journal:  Magn Reson Med       Date:  2010-10-28       Impact factor: 4.668

Review 7.  MRI quantification of non-Gaussian water diffusion by kurtosis analysis.

Authors:  Jens H Jensen; Joseph A Helpern
Journal:  NMR Biomed       Date:  2010-08       Impact factor: 4.044

8.  Cerebral gliomas: diffusional kurtosis imaging analysis of microstructural differences.

Authors:  Peter Raab; Elke Hattingen; Kea Franz; Friedhelm E Zanella; Heinrich Lanfermann
Journal:  Radiology       Date:  2010-01-20       Impact factor: 11.105

9.  On the effects of dephasing due to local gradients in diffusion tensor imaging experiments: relevance for diffusion tensor imaging fiber phantoms.

Authors:  Frederik Bernd Laun; Sandra Huff; Bram Stieltjes
Journal:  Magn Reson Imaging       Date:  2008-10-31       Impact factor: 2.546

10.  Age-related non-Gaussian diffusion patterns in the prefrontal brain.

Authors:  Maria F Falangola; Jens H Jensen; James S Babb; Caixia Hu; Francisco X Castellanos; Adriana Di Martino; Steven H Ferris; Joseph A Helpern
Journal:  J Magn Reson Imaging       Date:  2008-12       Impact factor: 4.813

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  3 in total

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Authors:  Rafael N Henriques; Sune N Jespersen; Derek K Jones; Jelle Veraart
Journal:  Magn Reson Med       Date:  2021-04-08       Impact factor: 3.737

2.  Comparison of multiple tractography methods for reconstruction of the retinogeniculate visual pathway using diffusion MRI.

Authors:  Jianzhong He; Fan Zhang; Guoqiang Xie; Shun Yao; Yuanjing Feng; Dhiego C A Bastos; Yogesh Rathi; Nikos Makris; Ron Kikinis; Alexandra J Golby; Lauren J O'Donnell
Journal:  Hum Brain Mapp       Date:  2021-05-12       Impact factor: 5.399

3.  Diffusional Kurtosis Imaging in the Diffusion Imaging in Python Project.

Authors:  Rafael Neto Henriques; Marta M Correia; Maurizio Marrale; Elizabeth Huber; John Kruper; Serge Koudoro; Jason D Yeatman; Eleftherios Garyfallidis; Ariel Rokem
Journal:  Front Hum Neurosci       Date:  2021-07-19       Impact factor: 3.169

  3 in total

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