Literature DB >> 26632036

Can radiomics features be reproducibly measured from CBCT images for patients with non-small cell lung cancer?

Xenia Fave1, Dennis Mackin2, Jinzhong Yang2, Joy Zhang2, David Fried1, Peter Balter2, David Followill2, Daniel Gomez3, A Kyle Jones4, Francesco Stingo5, Jonas Fontenot6, Laurence Court7.   

Abstract

PURPOSE: Increasing evidence suggests radiomics features extracted from computed tomography (CT) images may be useful in prognostic models for patients with nonsmall cell lung cancer (NSCLC). This study was designed to determine whether such features can be reproducibly obtained from cone-beam CT (CBCT) images taken using medical Linac onboard-imaging systems in order to track them through treatment.
METHODS: Test-retest CBCT images of ten patients previously enrolled in a clinical trial were retrospectively obtained and used to determine the concordance correlation coefficient (CCC) for 68 different texture features. The volume dependence of each feature was also measured using the Spearman rank correlation coefficient. Features with a high reproducibility (CCC > 0.9) that were not due to volume dependence in the patient test-retest set were further examined for their sensitivity to differences in imaging protocol, level of scatter, and amount of motion by using two phantoms. The first phantom was a texture phantom composed of rectangular cartridges to represent different textures. Features were measured from two cartridges, shredded rubber and dense cork, in this study. The texture phantom was scanned with 19 different CBCT imagers to establish the features' interscanner variability. The effect of scatter on these features was studied by surrounding the same texture phantom with scattering material (rice and solid water). The effect of respiratory motion on these features was studied using a dynamic-motion thoracic phantom and a specially designed tumor texture insert of the shredded rubber material. The differences between scans acquired with different Linacs and protocols, varying amounts of scatter, and with different levels of motion were compared to the mean intrapatient difference from the test-retest image set.
RESULTS: Of the original 68 features, 37 had a CCC >0.9 that was not due to volume dependence. When the Linac manufacturer and imaging protocol were kept consistent, 4-13 of these 37 features passed our criteria for reproducibility more than 50% of the time, depending on the manufacturer-protocol combination. Almost all of the features changed substantially when scatter material was added around the phantom. For the dense cork, 23 features passed in the thoracic scans and 11 features passed in the head scans when the differences between one and two layers of scatter were compared. Using the same test for the shredded rubber, five features passed the thoracic scans and eight features passed the head scans. Motion substantially impacted the reproducibility of the features. With 4 mm of motion, 12 features from the entire volume and 14 features from the center slice measurements were reproducible. With 6-8 mm of motion, three features (Laplacian of Gaussian filtered kurtosis, gray-level nonuniformity, and entropy), from the entire volume and seven features (coarseness, high gray-level run emphasis, gray-level nonuniformity, sum-average, information measure correlation, scaled mean, and entropy) from the center-slice measurements were considered reproducible.
CONCLUSIONS: Some radiomics features are robust to the noise and poor image quality of CBCT images when the imaging protocol is consistent, relative changes in the features are used, and patients are limited to those with less than 1 cm of motion.

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Year:  2015        PMID: 26632036      PMCID: PMC5148115          DOI: 10.1118/1.4934826

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  34 in total

1.  A method for incorporating organ motion due to breathing into 3D dose calculations.

Authors:  A E Lujan; E W Larsen; J M Balter; R K Ten Haken
Journal:  Med Phys       Date:  1999-05       Impact factor: 4.071

Review 2.  Correlation and simple linear regression.

Authors:  Kelly H Zou; Kemal Tuncali; Stuart G Silverman
Journal:  Radiology       Date:  2003-06       Impact factor: 11.105

3.  Implementation and validation of a three-dimensional deformable registration algorithm for targeted prostate cancer radiotherapy.

Authors:  He Wang; Lei Dong; Ming Fwu Lii; Andrew L Lee; Renaud de Crevoisier; Radhe Mohan; James D Cox; Deborah A Kuban; Rex Cheung
Journal:  Int J Radiat Oncol Biol Phys       Date:  2005-03-01       Impact factor: 7.038

4.  Non-small cell lung cancer: histopathologic correlates for texture parameters at CT.

Authors:  Balaji Ganeshan; Vicky Goh; Henry C Mandeville; Quan Sing Ng; Peter J Hoskin; Kenneth A Miles
Journal:  Radiology       Date:  2012-11-20       Impact factor: 11.105

5.  Tumour heterogeneity in non-small cell lung carcinoma assessed by CT texture analysis: a potential marker of survival.

Authors:  Balaji Ganeshan; Elleny Panayiotou; Kate Burnand; Sabina Dizdarevic; Ken Miles
Journal:  Eur Radiol       Date:  2011-11-17       Impact factor: 5.315

6.  Reproducibility and Prognosis of Quantitative Features Extracted from CT Images.

Authors:  Yoganand Balagurunathan; Yuhua Gu; Hua Wang; Virendra Kumar; Olya Grove; Sam Hawkins; Jongphil Kim; Dmitry B Goldgof; Lawrence O Hall; Robert A Gatenby; Robert J Gillies
Journal:  Transl Oncol       Date:  2014-02-01       Impact factor: 4.243

7.  Are pretreatment 18F-FDG PET tumor textural features in non-small cell lung cancer associated with response and survival after chemoradiotherapy?

Authors:  Gary J R Cook; Connie Yip; Muhammad Siddique; Vicky Goh; Sugama Chicklore; Arunabha Roy; Paul Marsden; Shahreen Ahmad; David Landau
Journal:  J Nucl Med       Date:  2012-11-30       Impact factor: 10.057

8.  Precise and real-time measurement of 3D tumor motion in lung due to breathing and heartbeat, measured during radiotherapy.

Authors:  Yvette Seppenwoolde; Hiroki Shirato; Kei Kitamura; Shinichi Shimizu; Marcel van Herk; Joos V Lebesque; Kazuo Miyasaka
Journal:  Int J Radiat Oncol Biol Phys       Date:  2002-07-15       Impact factor: 7.038

9.  Texture analysis of aggressive and nonaggressive lung tumor CE CT images.

Authors:  Omar S Al-Kadi; D Watson
Journal:  IEEE Trans Biomed Eng       Date:  2008-07       Impact factor: 4.538

10.  Evaluation of the potential utility of flat panel CT for quantifying relative contrast enhancement.

Authors:  A Kyle Jones; Armeen Mahvash
Journal:  Med Phys       Date:  2012-07       Impact factor: 4.071

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  54 in total

1.  Extracting and Selecting Robust Radiomic Features from PET/MR Images in Nasopharyngeal Carcinoma.

Authors:  Pengfei Yang; Lei Xu; Zuozhen Cao; Yidong Wan; Yi Xue; Yangkang Jiang; Eric Yen; Chen Luo; Jing Wang; Yi Rong; Tianye Niu
Journal:  Mol Imaging Biol       Date:  2020-12       Impact factor: 3.488

2.  Radiomics robustness assessment and classification evaluation: A two-stage method demonstrated on multivendor FFDM.

Authors:  Kayla Robinson; Hui Li; Li Lan; David Schacht; Maryellen Giger
Journal:  Med Phys       Date:  2019-03-12       Impact factor: 4.071

3.  Matching and Homogenizing Convolution Kernels for Quantitative Studies in Computed Tomography.

Authors:  Dennis Mackin; Rachel Ger; Skylar Gay; Cristina Dodge; Lifei Zhang; Jinzhong Yang; Aaron Kyle Jones; Laurence Court
Journal:  Invest Radiol       Date:  2019-05       Impact factor: 6.016

Review 4.  Towards precision medicine: from quantitative imaging to radiomics.

Authors:  U Rajendra Acharya; Yuki Hagiwara; Vidya K Sudarshan; Wai Yee Chan; Kwan Hoong Ng
Journal:  J Zhejiang Univ Sci B       Date:  2018 Jan.       Impact factor: 3.066

5.  AI-based applications in hybrid imaging: how to build smart and truly multi-parametric decision models for radiomics.

Authors:  Isabella Castiglioni; Francesca Gallivanone; Paolo Soda; Michele Avanzo; Joseph Stancanello; Marco Aiello; Matteo Interlenghi; Marco Salvatore
Journal:  Eur J Nucl Med Mol Imaging       Date:  2019-07-11       Impact factor: 9.236

6.  Neural network training for cross-protocol radiomic feature standardization in computed tomography.

Authors:  Vincent Andrearczyk; Adrien Depeursinge; Henning Müller
Journal:  J Med Imaging (Bellingham)       Date:  2019-06-06

Review 7.  "Radio-oncomics" : The potential of radiomics in radiation oncology.

Authors:  Jan Caspar Peeken; Fridtjof Nüsslin; Stephanie E Combs
Journal:  Strahlenther Onkol       Date:  2017-07-07       Impact factor: 3.621

8.  Evaluating stability of histomorphometric features across scanner and staining variations: prostate cancer diagnosis from whole slide images.

Authors:  Patrick Leo; George Lee; Natalie N C Shih; Robin Elliott; Michael D Feldman; Anant Madabhushi
Journal:  J Med Imaging (Bellingham)       Date:  2016-10-24

Review 9.  Clinical applications of textural analysis in non-small cell lung cancer.

Authors:  Iain Phillips; Mazhar Ajaz; Veni Ezhil; Vineet Prakash; Sheaka Alobaidli; Sarah J McQuaid; Christopher South; James Scuffham; Andrew Nisbet; Philip Evans
Journal:  Br J Radiol       Date:  2017-10-27       Impact factor: 3.039

10.  Combination of computer extracted shape and texture features enables discrimination of granulomas from adenocarcinoma on chest computed tomography.

Authors:  Mahdi Orooji; Mehdi Alilou; Sagar Rakshit; Niha Beig; Mohammad Hadi Khorrami; Prabhakar Rajiah; Rajat Thawani; Jennifer Ginsberg; Christopher Donatelli; Michael Yang; Frank Jacono; Robert Gilkeson; Vamsidhar Velcheti; Philip Linden; Anant Madabhushi
Journal:  J Med Imaging (Bellingham)       Date:  2018-04-18
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