Literature DB >> 26568072

Live from under the lens: exploring microbial motility with dynamic imaging and microfluidics.

Kwangmin Son1,2, Douglas R Brumley2,3, Roman Stocker2,3.   

Abstract

Motility is one of the most dynamic features of the microbial world. The ability to swim or crawl frequently governs how microorganisms interact with their physical and chemical environments, and underpins a myriad of microbial processes. The ability to resolve temporal dynamics through time-lapse video microscopy and the precise control of the physicochemical microenvironment afforded by microfluidics offer powerful new opportunities to study the many motility adaptations of microorganisms and thereby further our understanding of their ecology. In this Review, we outline recent insights into the motility strategies of microorganisms brought about by these techniques, including the hydrodynamic signature of microorganisms, their locomotion mechanics, chemotaxis, their motility near and on surfaces, swimming in moving fluids and motility in dense microbial suspensions.

Mesh:

Year:  2015        PMID: 26568072     DOI: 10.1038/nrmicro3567

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  82 in total

Review 1.  Biofilm, city of microbes.

Authors:  P Watnick; R Kolter
Journal:  J Bacteriol       Date:  2000-05       Impact factor: 3.490

Review 2.  Biofilm formation as microbial development.

Authors:  G O'Toole; H B Kaplan; R Kolter
Journal:  Annu Rev Microbiol       Date:  2000       Impact factor: 15.500

3.  Collective bacterial dynamics revealed using a three-dimensional population-scale defocused particle tracking technique.

Authors:  Mingming Wu; John W Roberts; Sue Kim; Donald L Koch; Matthew P DeLisa
Journal:  Appl Environ Microbiol       Date:  2006-07       Impact factor: 4.792

4.  Swimming in circles: motion of bacteria near solid boundaries.

Authors:  Eric Lauga; Willow R DiLuzio; George M Whitesides; Howard A Stone
Journal:  Biophys J       Date:  2005-10-20       Impact factor: 4.033

5.  Stochasticity of metabolism and growth at the single-cell level.

Authors:  Daniel J Kiviet; Philippe Nghe; Noreen Walker; Sarah Boulineau; Vanda Sunderlikova; Sander J Tans
Journal:  Nature       Date:  2014-09-03       Impact factor: 49.962

6.  Competition-dispersal tradeoff ecologically differentiates recently speciated marine bacterioplankton populations.

Authors:  Yutaka Yawata; Otto X Cordero; Filippo Menolascina; Jan-Hendrik Hehemann; Martin F Polz; Roman Stocker
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-01       Impact factor: 11.205

7.  Response rescaling in bacterial chemotaxis.

Authors:  Milena D Lazova; Tanvir Ahmed; Domenico Bellomo; Roman Stocker; Thomas S Shimizu
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-01       Impact factor: 11.205

Review 8.  Microfluidics expanding the frontiers of microbial ecology.

Authors:  Roberto Rusconi; Melissa Garren; Roman Stocker
Journal:  Annu Rev Biophys       Date:  2014       Impact factor: 12.981

9.  Psl trails guide exploration and microcolony formation in Pseudomonas aeruginosa biofilms.

Authors:  Kun Zhao; Boo Shan Tseng; Bernard Beckerman; Fan Jin; Maxsim L Gibiansky; Joe J Harrison; Erik Luijten; Matthew R Parsek; Gerard C L Wong
Journal:  Nature       Date:  2013-05-08       Impact factor: 49.962

10.  High-throughput 3D tracking of bacteria on a standard phase contrast microscope.

Authors:  K M Taute; S Gude; S J Tans; T S Shimizu
Journal:  Nat Commun       Date:  2015-11-02       Impact factor: 14.919

View more
  39 in total

1.  Temperature-induced behavioral switches in a bacterial coral pathogen.

Authors:  Melissa Garren; Kwangmin Son; Jessica Tout; Justin R Seymour; Roman Stocker
Journal:  ISME J       Date:  2015-12-04       Impact factor: 10.302

2.  Physical limits on bacterial navigation in dynamic environments.

Authors:  Andrew M Hein; Douglas R Brumley; Francesco Carrara; Roman Stocker; Simon A Levin
Journal:  J R Soc Interface       Date:  2016-01       Impact factor: 4.118

3.  Speed-dependent chemotactic precision in marine bacteria.

Authors:  Kwangmin Son; Filippo Menolascina; Roman Stocker
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-20       Impact factor: 11.205

4.  Dual-color multiple-particle tracking at 50-nm localization and over 100-µm range in 3D with temporal focusing two-photon microscopy.

Authors:  Yu Ding; Chunqiang Li
Journal:  Biomed Opt Express       Date:  2016-09-19       Impact factor: 3.732

Review 5.  Zooming in on the phycosphere: the ecological interface for phytoplankton-bacteria relationships.

Authors:  Justin R Seymour; Shady A Amin; Jean-Baptiste Raina; Roman Stocker
Journal:  Nat Microbiol       Date:  2017-05-30       Impact factor: 17.745

6.  Transitions in synchronization states of model cilia through basal-connection coupling.

Authors:  Yujie Liu; Rory Claydon; Marco Polin; Douglas R Brumley
Journal:  J R Soc Interface       Date:  2018-10-10       Impact factor: 4.118

Review 7.  Emergent Properties of Microbial Activity in Heterogeneous Soil Microenvironments: Different Research Approaches Are Slowly Converging, Yet Major Challenges Remain.

Authors:  Philippe C Baveye; Wilfred Otten; Alexandra Kravchenko; María Balseiro-Romero; Éléonore Beckers; Maha Chalhoub; Christophe Darnault; Thilo Eickhorst; Patricia Garnier; Simona Hapca; Serkan Kiranyaz; Olivier Monga; Carsten W Mueller; Naoise Nunan; Valérie Pot; Steffen Schlüter; Hannes Schmidt; Hans-Jörg Vogel
Journal:  Front Microbiol       Date:  2018-08-27       Impact factor: 5.640

8.  Catch me if you can: dispersal and foraging of Bdellovibrio bacteriovorus 109J along mycelia.

Authors:  Sally Otto; Estelle P Bruni; Hauke Harms; Lukas Y Wick
Journal:  ISME J       Date:  2016-11-08       Impact factor: 10.302

9.  Natural search algorithms as a bridge between organisms, evolution, and ecology.

Authors:  Andrew M Hein; Francesco Carrara; Douglas R Brumley; Roman Stocker; Simon A Levin
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-05       Impact factor: 11.205

10.  Migration of magnetotactic bacteria in porous media.

Authors:  Saeed Rismani Yazi; Reza Nosrati; Corey A Stevens; David Vogel; Carlos Escobedo
Journal:  Biomicrofluidics       Date:  2018-02-27       Impact factor: 2.800

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.