Literature DB >> 21808031

Response rescaling in bacterial chemotaxis.

Milena D Lazova1, Tanvir Ahmed, Domenico Bellomo, Roman Stocker, Thomas S Shimizu.   

Abstract

Sensory systems rescale their response sensitivity upon adaptation according to simple strategies that recur in processes as diverse as single-cell signaling, neural network responses, and whole-organism perception. Here, we study response rescaling in Escherichia coli chemotaxis, where adaptation dynamically tunes the cells' motile response during searches for nutrients. Using in vivo fluorescence resonance energy transfer (FRET) measurements on immobilized cells, we demonstrate that the design of this prokaryotic signaling network follows the fold-change detection (FCD) strategy, responding faithfully to the shape of the input profile irrespective of its absolute intensity. Using a microfluidics-based assay for free swimming cells, we confirm intensity-independent gradient responses at the behavioral level. By theoretical analysis, we identify a set of sufficient conditions for FCD in E. coli chemotaxis, which leads to the prediction that the adaptation timescale is invariant with respect to the background input level. Additional FRET experiments confirm that the adaptation timescale is invariant over an ∼10,000-fold range of background concentrations. These observations in a highly optimized bacterial system support the concept that FCD represents a robust sensing strategy for spatial searches. To our knowledge, these experiments provide a unique demonstration of FCD in any biological sensory system.

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Year:  2011        PMID: 21808031      PMCID: PMC3158140          DOI: 10.1073/pnas.1108608108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

1.  Robust perfect adaptation in bacterial chemotaxis through integral feedback control.

Authors:  T M Yi; Y Huang; M I Simon; J Doyle
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-25       Impact factor: 11.205

2.  Receptor sensitivity in bacterial chemotaxis.

Authors:  Victor Sourjik; Howard C Berg
Journal:  Proc Natl Acad Sci U S A       Date:  2001-12-11       Impact factor: 11.205

3.  A sensitive, versatile microfluidic assay for bacterial chemotaxis.

Authors:  Hanbin Mao; Paul S Cremer; Michael D Manson
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-18       Impact factor: 11.205

4.  Functional interactions between receptors in bacterial chemotaxis.

Authors:  Victor Sourjik; Howard C Berg
Journal:  Nature       Date:  2004-03-25       Impact factor: 49.962

5.  Temporal comparisons in bacterial chemotaxis.

Authors:  J E Segall; S M Block; H C Berg
Journal:  Proc Natl Acad Sci U S A       Date:  1986-12       Impact factor: 11.205

6.  The range of attractant concentrations for bacterial chemotaxis and the threshold and size of response over this range. Weber law and related phenomena.

Authors:  R Mesibov; G W Ordal; J Adler
Journal:  J Gen Physiol       Date:  1973-08       Impact factor: 4.086

7.  Neural events and the psychophysical law.

Authors:  S S Stevens
Journal:  Science       Date:  1970-12-04       Impact factor: 47.728

8.  Impulse responses in bacterial chemotaxis.

Authors:  S M Block; J E Segall; H C Berg
Journal:  Cell       Date:  1982-11       Impact factor: 41.582

9.  A miniature flow cell designed for rapid exchange of media under high-power microscope objectives.

Authors:  H C Berg; S M Block
Journal:  J Gen Microbiol       Date:  1984-11

10.  A simple coding procedure enhances a neuron's information capacity.

Authors:  S Laughlin
Journal:  Z Naturforsch C Biosci       Date:  1981 Sep-Oct
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  69 in total

Review 1.  Responding to chemical gradients: bacterial chemotaxis.

Authors:  Victor Sourjik; Ned S Wingreen
Journal:  Curr Opin Cell Biol       Date:  2011-12-09       Impact factor: 8.382

2.  Noninvasive inference of the molecular chemotactic response using bacterial trajectories.

Authors:  Jean-Baptiste Masson; Guillaume Voisinne; Jerome Wong-Ng; Antonio Celani; Massimo Vergassola
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-17       Impact factor: 11.205

Review 3.  Live from under the lens: exploring microbial motility with dynamic imaging and microfluidics.

Authors:  Kwangmin Son; Douglas R Brumley; Roman Stocker
Journal:  Nat Rev Microbiol       Date:  2015-12       Impact factor: 60.633

4.  Speed-dependent chemotactic precision in marine bacteria.

Authors:  Kwangmin Son; Filippo Menolascina; Roman Stocker
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-20       Impact factor: 11.205

5.  Optogenetic Manipulation of Cyclic Di-GMP (c-di-GMP) Levels Reveals the Role of c-di-GMP in Regulating Aerotaxis Receptor Activity in Azospirillum brasilense.

Authors:  Lindsey O'Neal; Min-Hyung Ryu; Mark Gomelsky; Gladys Alexandre
Journal:  J Bacteriol       Date:  2017-08-22       Impact factor: 3.490

6.  The Aerotactic Response of Caulobacter crescentus.

Authors:  Michael Morse; Remy Colin; Laurence G Wilson; Jay X Tang
Journal:  Biophys J       Date:  2016-05-10       Impact factor: 4.033

7.  Universal response-adaptation relation in bacterial chemotaxis.

Authors:  Anna K Krembel; Silke Neumann; Victor Sourjik
Journal:  J Bacteriol       Date:  2014-11-03       Impact factor: 3.490

Review 8.  New Twists and Turns in Bacterial Locomotion and Signal Transduction.

Authors:  Kylie J Watts; Ady Vaknin; Clay Fuqua; Barbara I Kazmierczak
Journal:  J Bacteriol       Date:  2019-09-20       Impact factor: 3.490

9.  Fundamental limitation of the instantaneous approximation in fold-change detection models.

Authors:  Maja Skataric; Evgeni V Nikolaev; Eduardo D Sontag
Journal:  IET Syst Biol       Date:  2015-02       Impact factor: 1.615

Review 10.  Quantitative modeling of bacterial chemotaxis: signal amplification and accurate adaptation.

Authors:  Yuhai Tu
Journal:  Annu Rev Biophys       Date:  2013-02-28       Impact factor: 12.981

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