| Literature DB >> 26473924 |
Claudio Baggiani1,2, Cristina Giovannoli3,4, Laura Anfossi5,6.
Abstract
Contemporary analytical methods have the sensitivity required for Ochratoxin A detection and quantification, but direct application of these methods on real samples can be rarely performed because of matrix complexity. Thus, efficient sample pre-treatment methods are needed. Recent years have seen the increasing use of artificial recognition systems as a viable alternative to natural receptors, because these materials seem to be particularly suitable for applications where selectivity for Ochratoxin A is essential. In this review, molecularly imprinted polymers, aptamers and tailor-made peptides for Ochratoxin A capture and analysis with particular attention to solid phase extraction applications will be discussed.Entities:
Keywords: Ochratoxin A; aptamer; binding peptide; molecularly imprinted polymer; mycotoxin; oligosorbent; peptide library; solid phase extraction
Mesh:
Substances:
Year: 2015 PMID: 26473924 PMCID: PMC4626722 DOI: 10.3390/toxins7104083
Source DB: PubMed Journal: Toxins (Basel) ISSN: 2072-6651 Impact factor: 4.546
Figure 1Molecular structures of OTA and related compounds cited in this review.
A comparison between immunoaffinity extraction and techniques based on artificial receptors.
| Issues | Immunoaffinity Chromatography | Molecularly Imprinted Polymers | Aptamers | Binding Peptides |
|---|---|---|---|---|
| binding structures | anti-OTA antibodies grafted onto chromatography-type solid supports | cross-linked synthetic polymers prepared in presence of OTA or OTA-mimic molecules | oligonucleotides selected through a sequential affinity purification/PCR amplification process | linear peptides selected through a sequential screening of a of a spatially addressable peptide combinatorial library |
| binding affinity | high | medium | medium | low |
| binding site density | low | high | low | low |
| binding kinetics | slow dissociation | slow dissociation | fast dissociation | fast dissociation |
| binding selectivity | high | high | high | high |
| reproducibility | limited | very high | very high | very high |
| non-specific binding | negligible | significant in water | negligible | negligible |
| resistance to extreme pH | no | yes | no | no |
| resistance to organic solvents | limited | yes | yes | yes |
| resistance to denaturing agents | no | yes | yes | yes |
| resistance to microorganisms | no | yes | no | no |
| needs of a solid support | yes | no | yes | yes |
| reuse | difficult, mainly monouse | yes | yes | yes |
| costs | low to medium | low | low | low |
| commercial availability as read-to-use | yes | yes | no | no |
| literature | large | growing | growing | limited |
Figure 2The molecular imprinting process.
Figure 3The SELEX process.
The Ochratoxin A (OTA)-binding aptamer sequences obtained by SELEX (systematic evolution of ligands by exponential enrichment) protocol reported in [50]. For clarity, the sequence of the primers was omitted and bases conserved across all sequences are highlighted in red.
| Aptamer | Sequence | Kd (µM) |
|---|---|---|
| GCATCTGATC | 0.36 | |
| GATC | 0.2 | |
| GATC | 0.8 | |
| GATC | 0.2 | |
| GATC | 1.6 | |
| GATC | 0.4 | |
| GATC | 0.5 | |
| G | 6.7 | |
| GCAGTCCTAGATC | 0.99 | |
| GCACGATGGGGAAA | 19.3 | |
| ACTGTCCGTC | 1.6 | |
| TCAGTCCCGATCA | 1.7 | |
| CCAAATCGGACG | 19.5 | |
| CGTACGGT | 7.1 | |
| CAGGTGGCAGATC | 0.96 | |
| ACATGCGACTGA | 4.3 | |
| CCTGACGATC | 2.5 | |
| CCTTGTAGATC | 0.97 | |
| GCAGTACGATCGG | 1.9 |
Figure 4Scheme of the sequential development of a spatially addressable parallel OTA-binding peptide library.