Literature DB >> 18983163

Determination of ochratoxin a with a DNA aptamer.

Jorge A Cruz-Aguado1, Gregory Penner.   

Abstract

This work describes the identification of an aptamer that binds with high affinity and specificity to ochratoxin A (OTA), a mycotoxin that occurs in wheat and other foodstuffs, and a quantitative detection method for OTA based on the use of this aptamer. Aptamers are single-stranded oligonucleotides selected in vitro to bind to molecular targets. The aptamer selected in this work exhibited a dissociation constant in the nanomolar range and did not bind compounds with structures similar to OTA such as N-acetylphenylalanine or warfarin. The aptamer bound with a 100-fold less affinity to ochratoxin B. The selected aptamers could be used for the determination of ppb quantities of OTA in naturally contaminated wheat samples. Further work is ongoing to broaden the application demonstrated here with the development of sensors, affinity columns, and other analytical systems for field and laboratory determination of this toxin in food and agricultural products.

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Year:  2008        PMID: 18983163     DOI: 10.1021/jf801957h

Source DB:  PubMed          Journal:  J Agric Food Chem        ISSN: 0021-8561            Impact factor:   5.279


  77 in total

1.  A fluorescent aptasensor for ochratoxin A detection based on enzymatically generated copper nanoparticles with a polythymine scaffold.

Authors:  Yue He; Fengyu Tian; Jing Zhou; Bining Jiao
Journal:  Mikrochim Acta       Date:  2019-02-22       Impact factor: 5.833

2.  Accelerating Post-SELEX Aptamer Engineering Using Exonuclease Digestion.

Authors:  Juan Canoura; Haixiang Yu; Obtin Alkhamis; Daniel Roncancio; Rifat Farhana; Yi Xiao
Journal:  J Am Chem Soc       Date:  2020-12-30       Impact factor: 15.419

3.  DFT and MD study of the divalent-cation-mediated interaction of ochratoxin A with DNA nucleosides.

Authors:  Jozef Motyčka; Pavel Mach; Milan Melicherčík; Jan Urban
Journal:  J Mol Model       Date:  2014-05-27       Impact factor: 1.810

Review 4.  Affinity chromatography: A review of trends and developments over the past 50 years.

Authors:  Elliott L Rodriguez; Saumen Poddar; Sazia Iftekhar; Kyungah Suh; Ashley G Woolfork; Susan Ovbude; Allegra Pekarek; Morgan Walters; Shae Lott; David S Hage
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2020-08-14       Impact factor: 3.205

5.  Microfluidic electrophoretic non-enzymatic kanamycin assay making use of a stirring bar functionalized with gold-labeled aptamer, of a fluorescent DNA probe, and of signal amplification via hybridization chain reaction.

Authors:  Kai Zhang; Ning Gan; Futao Hu; Xixue Chen; Tianhua Li; Jinxuan Cao
Journal:  Mikrochim Acta       Date:  2018-02-17       Impact factor: 5.833

Review 6.  Methods for measuring aptamer-protein equilibria: a review.

Authors:  Meng Jing; Michael T Bowser
Journal:  Anal Chim Acta       Date:  2010-11-10       Impact factor: 6.558

Review 7.  Re-Evaluating the Conventional Wisdom about Binding Assays.

Authors:  Brandon D Wilson; H Tom Soh
Journal:  Trends Biochem Sci       Date:  2020-05-10       Impact factor: 13.807

8.  Exonuclease-assisted multicolor aptasensor for visual detection of ochratoxin A based on G-quadruplex-hemin DNAzyme-mediated etching of gold nanorod.

Authors:  Xinhui Yu; Yaohui Lin; Xusheng Wang; Liangjun Xu; Zongwen Wang; FengFu Fu
Journal:  Mikrochim Acta       Date:  2018-04-21       Impact factor: 5.833

9.  SERS based aptasensor for ochratoxin A by combining Fe3O4@Au magnetic nanoparticles and Au-DTNB@Ag nanoprobes with multiple signal enhancement.

Authors:  Dan Song; Rong Yang; Shunyan Fang; Yanping Liu; Feng Long; Anna Zhu
Journal:  Mikrochim Acta       Date:  2018-10-03       Impact factor: 5.833

10.  A signal-on electrochemical aptasensor based on silanized cellulose nanofibers for rapid point-of-use detection of ochratoxin A.

Authors:  Ahmed Y El-Moghazy; Noha Amaly; Georges Istamboulie; Nitin Nitin; Gang Sun
Journal:  Mikrochim Acta       Date:  2020-09-01       Impact factor: 5.833

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