Literature DB >> 25335821

Miniaturized DNA aptamer-based monolithic sorbent for selective extraction of a target analyte coupled on-line to nanoLC.

Fabien Brothier1, Valérie Pichon.   

Abstract

A complete characterization of a novel target-specific DNA aptamer-based miniaturized solid phase extraction (SPE)-sorbent coupled on-line to nanoLC is presented. A miniaturized oligosorbent (mOS) was prepared via the in situ sol-gel synthesis of a hybrid organic-inorganic monolith in 100 μm i.d. capillary columns using tetraethoxysilane and 3-aminopropyltriethoxysilane as precursors, followed by covalent binding of a 5'-amino-modified DNA aptamer with a C12 spacer arm specific for a molecule of small molecular weight. Ochratoxin A (OTA), one of the most abundant naturally occurring mycotoxins, was chosen as model analyte to demonstrate the principle of such an approach. The mOS was coupled on-line to RP-nanoLC-LIF. Selective extraction of OTA on several mOSs was demonstrated with an average extraction recovery above 80 % when percolating spiked binding buffer and a low recovery on control monoliths grafted with a non-specific aptamer. Reproducibility of mOSs preparation was highlighted by comparing extraction yields. Otherwise, the mOSs demonstrated no cross-reactivity towards an OTA structural analogue, i.e., ochratoxin B. Due to the high specific surface area of the hybrid silica-based monolith, the coverage density of DNA aptamers covalently immobilized in the capillaries was very high and reached 6.27 nmol μL(-1), thus leading to a capacity above 5 ng of OTA. This miniaturized device was then applied to the selective extraction of OTA from beer samples. It revealed to be effective in isolating OTA from this complex matrix, thus improving the reliability of its analysis at the trace level.

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Year:  2014        PMID: 25335821     DOI: 10.1007/s00216-014-8256-z

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  7 in total

Review 1.  Recent Advances of Triazine-Based Materials for Adsorbent Based Extraction Techniques.

Authors:  Min Sun; Sen Han; Juanjuan Feng; Chunying Li; Xiangping Ji; Jiaqing Feng; Haili Sun
Journal:  Top Curr Chem (Cham)       Date:  2021-05-04

2.  In situ photo-initiated polymerized oligonucleotide-functionalized hydrophilic capillary affinity monolith for highly selective in-tube microextraction of ochratoxin A mycotoxin.

Authors:  Tingting Zhao; Xinyue Ding; Chenchen Lin; Xucong Lin; Zenghong Xie
Journal:  Mikrochim Acta       Date:  2021-09-14       Impact factor: 5.833

Review 3.  Man-Made Synthetic Receptors for Capture and Analysis of Ochratoxin A.

Authors:  Claudio Baggiani; Cristina Giovannoli; Laura Anfossi
Journal:  Toxins (Basel)       Date:  2015-10-10       Impact factor: 4.546

4.  Can Aptameric Ligands Specific to Plasma Coagulation Factor VII Bind the Recombinant Form with High Affinity: Affinity Measurement by Fluorescence Method.

Authors:  Maryam Tabarzad; Marzieh Jafari; Nastaran Nafissi-Varcheh
Journal:  Avicenna J Med Biotechnol       Date:  2017 Apr-Jun

5.  Characterisation of aptamer-anchored poly(EDMA-co-GMA) monolith for high throughput affinity binding.

Authors:  Caleb Acquah; Yi Wei Chan; Sharadwata Pan; Lau Sie Yon; Clarence M Ongkudon; Haobo Guo; Michael K Danquah
Journal:  Sci Rep       Date:  2019-10-10       Impact factor: 4.379

Review 6.  Immunoaffinity Extraction and Alternative Approaches for the Analysis of Toxins in Environmental, Food or Biological Matrices.

Authors:  Nathalie Delaunay; Audrey Combès; Valérie Pichon
Journal:  Toxins (Basel)       Date:  2020-12-13       Impact factor: 4.546

Review 7.  Innovations in Extractive Phases for In-Tube Solid-Phase Microextraction Coupled to Miniaturized Liquid Chromatography: A Critical Review.

Authors:  Henry Daniel Ponce-Rodríguez; Jorge Verdú-Andrés; Rosa Herráez-Hernández; Pilar Campíns-Falcó
Journal:  Molecules       Date:  2020-05-25       Impact factor: 4.411

  7 in total

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