| Literature DB >> 26473365 |
Eero Lauhkonen1, Petri Koponen1, Johanna Teräsjärvi2, Kirsi Gröndahl-Yli-Hannuksela2, Juho Vuononvirta2, Kirsi Nuolivirta3, Jyri O Toikka4, Merja Helminen1, Qiushui He2, Matti Korppi1.
Abstract
AIM: Interleukin-10 (IL-10) has been associated with wheezing and asthma in children and the genetic variation of the IL-10 cytokine production may be linked to post-bronchiolitis lung function. We used impulse oscillometry (IOS) to evaluate the associations of IL10 polymorphisms with lung function at a median age of 6.3 years in children hospitalised for bronchiolitis before six months of age.Entities:
Mesh:
Substances:
Year: 2015 PMID: 26473365 PMCID: PMC4608806 DOI: 10.1371/journal.pone.0140799
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Fig 1R2 -values for the studied IL-10 polymorphisms in Finnish population based data.
The formation of ACC(A)/ATA(A) genotype from the parental DNA strands described as an example. Colour = R -correlation, all pairs D´ = 1. Modified from [28].
Minor allele frequencies of the studied IL-10 polymorphisms and comparison to population genetics.
| Single nucleotide polymorphism | Minor allele frequency | FIN | EUR |
|---|---|---|---|
| rs1800896 (G>A) | 0.45 | 0.40 | 0.45 |
| rs1800871(C>T) /…72 (C>A) | 0.18 | 0.24 | 0.24 |
| rs1800890 (A>T) | 0.39 | 0.31 | 0.37 |
FIN = Finnish, EUR = European as in [25]
Impulse oscillometry presented as Z-scores in relation to IL-10 rs1800896 polymorphism in 99 children under the age of seven after hospitalisation for bronchiolitis at less than six months of age.
| IOS parameter | G/G | A/G | A/A | p | G-allele | p | A-allele | p |
|---|---|---|---|---|---|---|---|---|
| n = 26 | n = 48 | n = 25 | n = 74 | n = 73 | ||||
|
| Mean (SD) | Mean (SD) | Mean (SD) | Mean (SD) | Mean (SD) | |||
| Rrs5Hz | -0.16 (0.96) | -0.02 (1.11) | -0.05 (1.07) | 0.86 | -0.07 (1.05) | 0.59 | -0.03 (1.09) | 0.82 |
| Xrs5Hz | -0.76 (1.25) | -0.72 (1.08) | -0.71 (1.46) | 0.93 | -0.73 (1.13) | 0.79 | 0.71 (1.21) | 0.74 |
| Fres | 2.32 (0.64) | 2.27 (0.87) | 2.06 (0.94) | 0.67 | 2.29 (0.79) | 0.39 | 2.20 (0.89) | 0.57 |
| dRs/df | -0.86 (1.00) | -1.16 (1.14) | -0.91 (1.19) | 0.65 | -1.06 (1.10) | 0.54 | -1.08 (1.16) | 0.67 |
|
| ||||||||
| Rrs5Hz | 0.05 (1.12) | 0.34 (1.12) | 0.04 (1.25) | 0.90 | 0.24 (1.12) | 0.97 | 0.24 (1.16) | 0.68 |
| Xrs5Hz | -1.08 (1.37) | -1.09 (1.37) | -1.01 (1.74) | 0.93 | -1.09 (1.36) | 0.97 | -1.07 (1.49) | 0.71 |
| Fres | 2.48 (0.75) | 2.44 (0.87) | 2.19 (1.01) | 0.69 | 2.45 (0.83) | 0.55 | 2.35 (0.92) | 0.42 |
| dRs/df | -1.20 (1.08) | -1.54 (1.40) | -1.17 (1.61) | 0.62 | -1.42 (1.30) | 0.45 | -1.41 (1.47) | 0.77 |
Zrs = Total Impedance; Rrs = Resistance; Xrs = Reactance; Fres = Resonant Frequency; dRrs/df = Frequency Dependency of Resistance
adjusted for age, maternal smoking during pregnancy, RSV and rhinovirus aetiology of bronchiolitis and BMI Z-score
*allele carriers vs. non-carriers
Impulse oscillometry presented as Z-scores in relation to IL-10 rs1800871/rs1800872 polymorphisms in 99 children under the age of seven after hospitalisation for bronchiolitis at less than six months of age.
| IOS parameter | C/C | C/T or C/A | T/T or A/A | p | C-allele | p | T- /A-allele | p |
|---|---|---|---|---|---|---|---|---|
| n = 68 | n = 27 | n = 4 | n = 95 | n = 31 | ||||
|
| Mean (SD) | Mean (SD) | Mean (SD) | Mean (SD) | Mean (SD) | |||
| Rrs5Hz | -0.17 (1.00) | 0.15 (1.16) | 0.27 (1.16) | 0.08 | -0.08 (1.05) | 0.64 | 0.17 (1.14) |
|
| Xrs5Hz | -0.60 (0.98) | -0.85 (1.58) | -2.07 (1.47) |
| -0.67 (1.18) |
| -1.01 (1.60) |
|
| Fres | 2.17 (0.84) | 2.32 (0.85) | 2.73 (0.63) | 0.33 | 2.21 (0.84) | 0.26 | 2.37 (0.82) | 0.20 |
| dRs/df | -0.95 (1.00) | -1.12 (1.38) | -1.48 (1.13) | 0.33 | -1.00 (1.12) | 0.37 | -1.17 (1.34) | 0.16 |
|
| ||||||||
| Rrs5Hz | 0.09 (1.14) | 0.29 (1.13) | 1.11 (1.34) | 0.11 | 0.15 (1.13) | 0.11 | 0.40 (1.17) | 0.07 |
| Xrs5Hz | -1.02 (1.36) | -0.93 (1.60) | -2.70 (1.50) | 0.07 | -1.00 (1.43) |
| -1.16 (1.67) | 0.39 |
| Fres | 2.33 (0.91) | 2.41 (0.74) | 3.20 (1.06) | 0.13 | 2.35 (0.86) |
| 2.51 (0.81) | 0.22 |
| dRs/df | -1.29 (1.36) | -1.38 (1.46) | -2.34 (0.94) | 0.25 | -1.32 (1.38) | 0.13 | -1.50 (1.43) | 0.25 |
Zrs = Total Impedance; Rrs = Resistance; Xrs = Reactance; Fres = Resonant Frequency; dRrs/df = Frequency Dependency of Resistance
adjusted for age, maternal smoking during pregnancy, RSV and rhinovirus aetiology of bronchiolitis and BMI Z-score
*allele carriers vs. non-carriers
Impulse oscillometry presented as Z-scores in relation to IL-10 rs1800890 polymorphism in 98 children under the age of seven after hospitalisation for bronchiolitis at less than six months of age.
| IOS parameter | A/A | A/T | T/T | p | A-allele | p | T-allele | p |
|---|---|---|---|---|---|---|---|---|
| n = 35 | n = 50 | n = 13 | n = 85 | n = 74 | ||||
|
| Mean (SD) | Mean (SD) | Mean (SD) | Mean (SD) | Mean (SD) | |||
| Rrs5Hz | 0.10 (1.03) | -0.17 (1.10) | -0.22 (0.77) | 0.13 | -0.06 (1.08) | 0.58 | -0.18 (1.04) |
|
| Xrs5Hz | -1.02 (1.25) | -0.64 (1.11) | -0.06 (1.08) |
| -0.79 (1.18) |
| -0.52 (1.12) |
|
| Fres | 2.38 (0.85) | 2.16 (0.84) | 2.02 (0.66) | 0.20 | 2.25 (0.85) | 0.36 | 2.13 (0.81) | 0.08 |
| dRs/df | -1.23 (1.09) | -0.93 (1.14) | -0.64 (0.93) | 0.20 | -1.06 (1.12) | 0.24 | -0.87 (1.10) | 0.10 |
|
| ||||||||
| Rrs5Hz | 0.37 (1.12) | 0.09 (1.20) | -0.07 (0.85) | 0.10 | 0.20 (1.17) | 0.37 | 0.05 (1.13) |
|
| Xrs5Hz | -1.27 (1.53) | -1.06 (1.44) | -0.33 (0.90) | 0.11 | -1.14 (1.47) | 0.06 | -0.91 (1.37) | 0.15 |
| Fres | 2.49 (0.78) | 2.36 (0.92) | 2.04 (0.79) | 0.12 | 2.41 (0.86) | 0.12 | 2.30 (0.90) | 0.09 |
| dRs/df | -1.63 (1.49) | -1.26 (1.30) | -0.83 (1.12) | 0.16 | -1.41 (1.39) | 0.19 | -1.17 (1.27) | 0.08 |
Zrs = Total Impedance; Rrs = Resistance; Xrs = Reactance; Fres = Resonant Frequency; dRrs/df = Frequency Dependency of Resistance
adjusted for age, maternal smoking during pregnancy, RSV and rhinovirus aetiology of bronchiolitis and BMI Z-score
*allele carriers vs. non-carriers
Combined IL-10 rs1800896, rs1800871 and rs1800872 genotypes and haplotype frequencies of 99 children hospitalised for bronchiolitis in infancy.
|
| n (%) |
| GG+CC+CC (GCC/GCC) | 16 (16.2) |
| GG+CT+CA (GCC/GTA or GTA/GCC) | 7 (7.1) |
| GG+TT+AA (GTA/GTA) | 3 (3.0) |
| GA+CC+CC (GCC/ACC or ACC/GCC) | 35 (35.4) |
| GA+CT+CA (GCC/ATA or ATA/GCC) | 13 (13.1) |
| GA+TT+AA (GTA/ATA or ATA/GTA) | 0 (0.0) |
| AA+CC+CC (ACC/ACC) | 17 (17.2) |
| AA+CT+CA (ACC/ATA or ATA/ACC) | 7 (7.1) |
| AA+TT+AA (ATA/ATA) | 1 (1.0) |
|
| f |
| GCC | 0.44 |
| GTA | 0.07 |
| ACC | 0.39 |
| ATA | 0.11 |
*GTA/ACC or ACC/GTA not present as estimated from the study population frequencies.
Impulse oscillometry presented as Z-scores in relation to combined IL-10 rs1800896, rs1800871 and rs1800872 genotypes in 99 children under the age of seven after hospitalisation for bronchiolitis in infancy.
| IOS parameter | GG+CC+CC | GG+CT+CA | GG+TT+AA | GA+CC+CC | GA+CT+CA | AA+CC+CC | AA+CT+CA |
|---|---|---|---|---|---|---|---|
| n = 16 | n = 7 | n = 3 | n = 35 | n = 13 | n = 17 | n = 7 | |
|
| mean (SD) | mean (SD) | mean (SD) | mean (SD) | mean (SD) | mean (SD) | mean (SD) |
| Rrs5Hz | -0.20 (0.57) | -0.30 (1.47) | 0.40 (1.38) | -0.06 (1.11) | 0.09 (1.14) | -0.36 (1.09) |
|
| Xrs5Hz | -0.70 (1.15) | -0.14 (0.75) |
| -0.66 (0.95) | -0.86 (1.39) | -0.36 (0.88) |
|
| Fres | 2.23 (0.58) | 2.29 (0.73) | 2.89 (0.66) | 2.27 (0.88) | 2.29 (0.86) | 1.91 (0.93) | 2.39 (1.03) |
| dRs/df | -0.87 (0.91) | -0.56 (1.06) | -1.55 (1.37) | -1.11 (1.12) | -1.31 (1.40) | -0.72 (1.00) | -1.32 (1.64) |
|
| |||||||
| Rrs5Hz | -0.19 (0.83) | 0.11 (1.33) | 1.20 (1.63) | 0.36 (1.15) | 0.29 (1.09) | -0.19 (1.29) | 0.49 (1.14) |
| Xrs5Hz | -0.82 (1.15) | -0.78 (1.26) |
| -1.03 (1.29) | -1.26 (1.59) | -1.21 (1.71) | -0.47 (1.97) |
| Fres | 2.31 (0.63) | 2.48 (0.58) | 3.40 (1.20) | 2.41 (0.96) | 2.51 (0.63) | 2.19 (1.04) | 2.13 (1.06) |
| dRs/df | -1.04 (0.90) | -0.99 (1.26) | -2.54 (1.04) | -1.50 (1.44) | -1.64 (1.34) | -1.09 (1.55) | -1.28 (1.96) |
Zrs = Total Impedance; Rrs = Resistance; Xrs = Reactance; Fres = Resonant Frequency; dRrs/df = Frequency Dependency of Resistance
adjusted p<0.05 vs. non-AA+CT+CA (n = 92) or non-GG+TT+AA (n = 96), as adjusted for age, maternal smoking during pregnancy, RSV- and rhinovirus etiology of bronchiolitis and BMI Z-score
Impulse oscillometry presented as Z-scores in relation to IL-10 rs1800896, rs1800871 and rs1800872 haplotype carriage in 99 pre-school-aged children after hospitalization for bronchiolitis in infancy.
| IOS parameter | GCC | GTA | ACC | ATA | p |
|---|---|---|---|---|---|
| n = 71 | n = 10 | n = 59 | n = 21 | ||
|
| Mean (SD) | Mean (SD) | Mean (SD) | Mean (SD) | |
| Rrs5Hz | -0.09 (1.04) | -0.09 (1.40) | -0.05 (1.09) | 0.29 (1.01) |
|
| Xrs5Hz | -0.66 (1.07) | -0.86 (1.46) | -0.68 (1.19) | -1.08 (1.69) | 0.07 |
| Fres | 2.27 (0.79) | 2.47 (0.73) | 2.18 (0.91) | 2.32 (0.88) | 0.44 |
| dRs/df | -1.04 (1.09) | -0.86 (1.18) | -1.02 (1.11) | -1.32 (1.41) | 0.10 |
|
| |||||
| Rrs5Hz | 0.20 (1.09) | 0.43 (1.43) | 0.22 (1.20) | 0.38 (1.06) | 0.24 |
| Xrs5Hz | -1.00 (1.30) | -1.49 (1.69) | -1.02 (1.49) | -1.00 (1.69) | 0.98 |
| Fres | 2.41 (0.79) | 2.76 (0.86) | 2.31 (0.98) | 2.39 (0.78) | 0.81 |
| dRs/df | -1.37 (1.29) | -1.46 (1.34) | -1.36 (1.52) | -1.53 (1.50) | 0.39 |
Zrs = Total Impedance; Rrs = Resistance; Xrs = Reactance; Fres = Resonant Frequency; dRrs/df = Frequency Dependency of Resistance
ATA vs. non-ATA (n = 78) adjusted for age, maternal smoking during pregnancy, RSV- and rhinovirus etiology of bronchiolitis and BMI z-score