Literature DB >> 26417520

Three-dimensional, three-vector-component velocimetry of cilia-driven fluid flow using correlation-based approaches in optical coherence tomography.

Brendan K Huang1, Ute A Gamm2, Vineet Bhandari3, Mustafa K Khokha4, Michael A Choma5.   

Abstract

Microscale quantification of cilia-driven fluid flow is an emerging area in medical physiology, including pulmonary and central nervous system physiology. Cilia-driven fluid flow is most completely described by a three-dimensional, three-component (3D3C) vector field. Here, we generate 3D3C velocimetry measurements by synthesizing higher dimensional data from lower dimensional measurements obtained using two separate optical coherence tomography (OCT)-based approaches: digital particle image velocimetry (DPIV) and dynamic light scattering (DLS)-OCT. Building on previous work, we first demonstrate directional DLS-OCT for 1D2C velocimetry measurements in the sub-1 mm/s regime (sub-2.5 inch/minute regime) of cilia-driven fluid flow in Xenopus epithelium, an important animal model of the ciliated respiratory tract. We then extend our analysis toward 3D3C measurements in Xenopus using both DLS-OCT and DPIV. We demonstrate the use of DPIV-based approaches towards flow imaging of Xenopus cerebrospinal fluid and mouse trachea, two other important ciliary systems. Both of these flows typically fall in the sub-100 μm/s regime (sub-0.25 inch/minute regime). Lastly, we develop a framework for optimizing the signal-to-noise ratio of 3D3C flow velocity measurements synthesized from 2D2C measures in non-orthogonal planes. In all, 3D3C OCT-based velocimetry has the potential to comprehensively characterize the flow performance of biological ciliated surfaces.

Entities:  

Keywords:  (110.4500) Optical coherence tomography; (120.7250) Velocimetry; (170.3340) Laser Doppler velocimetry; (170.6480) Spectroscopy, speckle

Year:  2015        PMID: 26417520      PMCID: PMC4574676          DOI: 10.1364/BOE.6.003515

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  30 in total

1.  Spatiotemporal image correlation spectroscopy (STICS) theory, verification, and application to protein velocity mapping in living CHO cells.

Authors:  Benedict Hebert; Santiago Costantino; Paul W Wiseman
Journal:  Biophys J       Date:  2005-02-18       Impact factor: 4.033

2.  In vivo bidirectional color Doppler flow imaging of picoliter blood volumes using optical coherence tomography.

Authors:  J A Izatt; M D Kulkarni; S Yazdanfar; J K Barton; A J Welch
Journal:  Opt Lett       Date:  1997-09-15       Impact factor: 3.776

3.  An all-optical approach for probing microscopic flows in living embryos.

Authors:  Willy Supatto; Scott E Fraser; Julien Vermot
Journal:  Biophys J       Date:  2008-06-13       Impact factor: 4.033

4.  Imaging fluid flow and cilia beating pattern in Xenopus brain ventricles.

Authors:  Frank Miskevich
Journal:  J Neurosci Methods       Date:  2010-02-19       Impact factor: 2.390

5.  An autoregulatory mechanism governing mucociliary transport is sensitive to mucus load.

Authors:  Linbo Liu; Suresh Shastry; Suzanne Byan-Parker; Grace Houser; Kengyeh K Chu; Susan E Birket; Courtney M Fernandez; Joseph A Gardecki; William E Grizzle; Eric J Wilsterman; Eric J Sorscher; Steven M Rowe; Guillermo J Tearney
Journal:  Am J Respir Cell Mol Biol       Date:  2014-10       Impact factor: 6.914

6.  Release of extracellular membrane particles carrying the stem cell marker prominin-1 (CD133) from neural progenitors and other epithelial cells.

Authors:  Anne-Marie Marzesco; Peggy Janich; Michaela Wilsch-Bräuninger; Véronique Dubreuil; Katja Langenfeld; Denis Corbeil; Wieland B Huttner
Journal:  J Cell Sci       Date:  2005-07-01       Impact factor: 5.285

7.  Techniques and probes for the study of Xenopus tropicalis development.

Authors:  Mustafa K Khokha; Christina Chung; Erika L Bustamante; Lisa W K Gaw; Kristin A Trott; Joanna Yeh; Nancy Lim; Jennifer C Y Lin; Nicola Taverner; Enrique Amaya; Nancy Papalopulu; James C Smith; Aaron M Zorn; Richard M Harland; Timothy C Grammer
Journal:  Dev Dyn       Date:  2002-12       Impact factor: 3.780

8.  A novel approach to quantifying ciliary physiology: microfluidic mixing driven by a ciliated biological surface.

Authors:  Stephan Jonas; Elaine Zhou; Engin Deniz; Brendan Huang; Kenny Chandrasekera; Dipankan Bhattacharya; Yu Wu; Rong Fan; Thomas M Deserno; Mustafa K Khokha; Michael A Choma
Journal:  Lab Chip       Date:  2013-11-07       Impact factor: 6.799

9.  Monitoring airway mucus flow and ciliary activity with optical coherence tomography.

Authors:  Amy L Oldenburg; Raghav K Chhetri; David B Hill; Brian Button
Journal:  Biomed Opt Express       Date:  2012-08-01       Impact factor: 3.732

10.  Microfluidic characterization of cilia-driven fluid flow using optical coherence tomography-based particle tracking velocimetry.

Authors:  Stephan Jonas; Dipankan Bhattacharya; Mustafa K Khokha; Michael A Choma
Journal:  Biomed Opt Express       Date:  2011-06-22       Impact factor: 3.732

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  10 in total

1.  Gaussian process post-processing for particle tracking velocimetry.

Authors:  Tommy Tang; Engin Deniz; Mustafa K Khokha; Hemant D Tagare
Journal:  Biomed Opt Express       Date:  2019-06-07       Impact factor: 3.732

2.  Ultrahigh-speed, phase-sensitive full-field interferometric confocal microscopy for quantitative microscale physiology.

Authors:  Ikbal Sencan; Brendan K Huang; Yong Bian; Emily Mis; Mustafa K Khokha; Hui Cao; Michael Choma
Journal:  Biomed Opt Express       Date:  2016-10-20       Impact factor: 3.732

3.  Particle streak velocimetry-optical coherence tomography: a novel method for multidimensional imaging of microscale fluid flows.

Authors:  Kevin C Zhou; Brendan K Huang; Ute A Gamm; Vineet Bhandari; Mustafa K Khokha; Michael A Choma
Journal:  Biomed Opt Express       Date:  2016-03-30       Impact factor: 3.732

4.  Erratum: Particle streak velocimetry-optical coherence tomography: a novel method for multidimensional imaging of microscale fluid flows: erratum.

Authors:  Kevin C Zhou; Brendan K Huang; Ute A Gamm; Vineet Bhandari; Mustafa K Khokha; Michael A Choma
Journal:  Biomed Opt Express       Date:  2016-05-23       Impact factor: 3.732

5.  In vivo three-dimensional tracking of sperm behaviors in the mouse oviduct.

Authors:  Shang Wang; Irina V Larina
Journal:  Development       Date:  2018-03-19       Impact factor: 6.868

6.  Improved velocimetry in optical coherence tomography using Bayesian analysis.

Authors:  Kevin C Zhou; Brendan K Huang; Hemant Tagare; Michael A Choma
Journal:  Biomed Opt Express       Date:  2015-11-12       Impact factor: 3.732

7.  Ex vivo visualization of human ciliated epithelium and quantitative analysis of induced flow dynamics by using optical coherence tomography.

Authors:  Yuye Ling; Xinwen Yao; Ute A Gamm; Emilio Arteaga-Solis; Charles W Emala; Michael A Choma; Christine P Hendon
Journal:  Lasers Surg Med       Date:  2017-02-23       Impact factor: 4.025

Review 8.  Corneal biomechanics: Measurement and structural correlations.

Authors:  Jillian Chong; William J Dupps
Journal:  Exp Eye Res       Date:  2021-02-18       Impact factor: 3.467

9.  Visualization and Detection of Ciliary Beating Pattern and Frequency in the Upper Airway using Phase Resolved Doppler Optical Coherence Tomography.

Authors:  Joseph C Jing; Jason J Chen; Lidek Chou; Brian J F Wong; Zhongping Chen
Journal:  Sci Rep       Date:  2017-08-17       Impact factor: 4.379

10.  Visualizing flow in an intact CSF network using optical coherence tomography: implications for human congenital hydrocephalus.

Authors:  Priya Date; Pascal Ackermann; Charuta Furey; Ina Berenice Fink; Stephan Jonas; Mustafa K Khokha; Kristopher T Kahle; Engin Deniz
Journal:  Sci Rep       Date:  2019-04-17       Impact factor: 4.379

  10 in total

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