Literature DB >> 26713195

Improved velocimetry in optical coherence tomography using Bayesian analysis.

Kevin C Zhou1, Brendan K Huang1, Hemant Tagare2, Michael A Choma3.   

Abstract

OCT is a popular cross-sectional microscale imaging modality in medicine and biology. While structural imaging using OCT is a mature technology in many respects, flow and motion estimation using OCT remains an intense area of research. In particular, there is keen interest in maximizing information extraction from the complex-valued OCT signal. Here, we introduce a Bayesian framework into the data workflow in OCT-based velocimetry. We demonstrate that using prior information in this Bayesian framework can significantly improve velocity estimate precision in a correlation-based, model-based framework for Doppler and transverse velocimetry. We show results in calibrated flow phantoms as well as in vivo in a Drosophila melanogaster (fruit fly) heart. Thus, our work improves upon the current approaches in terms of improved information extraction from the complex-valued OCT signal.

Entities:  

Keywords:  (000.5490) Probability theory, stochastic processes, and statistics; (030.6140) Speckle; (110.4153) Motion estimation and optical flow; (110.4500) Optical coherence tomography; (170.3880) Medical and biological imaging; (290.5820) Scattering measurements

Year:  2015        PMID: 26713195      PMCID: PMC4679255          DOI: 10.1364/BOE.6.004796

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  7 in total

1.  Three-dimensional, three-vector-component velocimetry of cilia-driven fluid flow using correlation-based approaches in optical coherence tomography.

Authors:  Brendan K Huang; Ute A Gamm; Vineet Bhandari; Mustafa K Khokha; Michael A Choma
Journal:  Biomed Opt Express       Date:  2015-08-24       Impact factor: 3.732

2.  Localized measurement of longitudinal and transverse flow velocities in colloidal suspensions using optical coherence tomography.

Authors:  Nicolás Weiss; Ton G van Leeuwen; Jeroen Kalkman
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2013-10-28

3.  Dynamic light scattering optical coherence tomography.

Authors:  Jonghwan Lee; Weicheng Wu; James Y Jiang; Bo Zhu; David A Boas
Journal:  Opt Express       Date:  2012-09-24       Impact factor: 3.894

Review 4.  Optical coherence tomography today: speed, contrast, and multimodality.

Authors:  Wolfgang Drexler; Mengyang Liu; Abhishek Kumar; Tschackad Kamali; Angelika Unterhuber; Rainer A Leitgeb
Journal:  J Biomed Opt       Date:  2014       Impact factor: 3.170

5.  Resolving directional ambiguity in dynamic light scattering-based transverse motion velocimetry in optical coherence tomography.

Authors:  Brendan K Huang; Michael A Choma
Journal:  Opt Lett       Date:  2014-02-01       Impact factor: 3.776

6.  Quantitative transverse flow measurement using optical coherence tomography speckle decorrelation analysis.

Authors:  Xuan Liu; Yong Huang; Jessica C Ramella-Roman; Scott A Mathews; Jin U Kang
Journal:  Opt Lett       Date:  2013-03-01       Impact factor: 3.776

7.  OCT methods for capillary velocimetry.

Authors:  Vivek J Srinivasan; Harsha Radhakrishnan; Eng H Lo; Emiri T Mandeville; James Y Jiang; Scott Barry; Alex E Cable
Journal:  Biomed Opt Express       Date:  2012-02-24       Impact factor: 3.732

  7 in total
  4 in total

1.  Noise and bias in optical coherence tomography intensity signal decorrelation.

Authors:  Néstor Uribe-Patarroyo; Anouk L Post; Sebastián Ruiz-Lopera; Dirk J Faber; Brett E Bouma
Journal:  OSA Contin       Date:  2020-03-17

2.  Gaussian process post-processing for particle tracking velocimetry.

Authors:  Tommy Tang; Engin Deniz; Mustafa K Khokha; Hemant D Tagare
Journal:  Biomed Opt Express       Date:  2019-06-07       Impact factor: 3.732

3.  Particle streak velocimetry-optical coherence tomography: a novel method for multidimensional imaging of microscale fluid flows.

Authors:  Kevin C Zhou; Brendan K Huang; Ute A Gamm; Vineet Bhandari; Mustafa K Khokha; Michael A Choma
Journal:  Biomed Opt Express       Date:  2016-03-30       Impact factor: 3.732

4.  Erratum: Particle streak velocimetry-optical coherence tomography: a novel method for multidimensional imaging of microscale fluid flows: erratum.

Authors:  Kevin C Zhou; Brendan K Huang; Ute A Gamm; Vineet Bhandari; Mustafa K Khokha; Michael A Choma
Journal:  Biomed Opt Express       Date:  2016-05-23       Impact factor: 3.732

  4 in total

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