Literature DB >> 26368470

Deconvolution of fluorescence lifetime imaging microscopy by a library of exponentials.

Daniel U Campos-Delgado, O Gutierrez Navarro, E R Arce-Santana, Alex J Walsh, Melissa C Skala, Javier A Jo.   

Abstract

Fluorescence lifetime microscopy imaging (FLIM) is an optic technique that allows a quantitative characterization of the fluorescent components of a sample. However, for an accurate interpretation of FLIM, an initial processing step is required to deconvolve the instrument response of the system from the measured fluorescence decays. In this paper, we present a novel strategy for the deconvolution of FLIM data based on a library of exponentials. Our approach searches for the scaling coefficients of the library by non-negative least squares approximations plus Thikonov/l(2) or l(1) regularization terms. The parameters of the library are given by the lower and upper bounds in the characteristic lifetimes of the exponential functions and the size of the library, where we observe that this last variable is not a limiting factor in the resulting fitting accuracy. We compare our proposal to nonlinear least squares and global non-linear least squares estimations with a multi-exponential model, and also to constrained Laguerre-base expansions, where we visualize an advantage of our proposal based on Thikonov/l(2) regularization in terms of estimation accuracy, computational time, and tuning strategy. Our validation strategy considers synthetic datasets subject to both shot and Gaussian noise and samples with different lifetime maps, and experimental FLIM data of ex-vivo atherosclerotic plaques and human breast cancer cells.

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Year:  2015        PMID: 26368470      PMCID: PMC4646519          DOI: 10.1364/OE.23.023748

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  24 in total

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Review 2.  Multimodality cardiovascular molecular imaging technology.

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5.  Fully automated deconvolution method for on-line analysis of time-resolved fluorescence spectroscopy data based on an iterative Laguerre expansion technique.

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8.  High-speed multispectral fluorescence lifetime imaging implementation for in vivo applications.

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9.  A fast global fitting algorithm for fluorescence lifetime imaging microscopy based on image segmentation.

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  6 in total

1.  Temporal binning of time-correlated single photon counting data improves exponential decay fits and imaging speed.

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2.  High Resolution Fluorescence Lifetime Maps from Minimal Photon Counts.

Authors:  Mohamadreza Fazel; Sina Jazani; Lorenzo Scipioni; Alexander Vallmitjana; Enrico Gratton; Michelle A Digman; Steve Pressé
Journal:  ACS Photonics       Date:  2022-02-10       Impact factor: 7.077

3.  Image Restoration for Fluorescence Planar Imaging with Diffusion Model.

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Journal:  Biomed Res Int       Date:  2017-11-27       Impact factor: 3.411

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Journal:  J Biomed Opt       Date:  2020-05       Impact factor: 3.170

5.  Large field-of-view nanometer-sectioning microscopy by using metal-induced energy transfer and biexponential lifetime analysis.

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6.  Blind deconvolution estimation by multi-exponential models and alternated least squares approximations: Free-form and sparse approach.

Authors:  Daniel U Campos-Delgado; Omar Gutierrez-Navarro; Ricardo Salinas-Martinez; Elvis Duran; Aldo R Mejia-Rodriguez; Miguel J Velazquez-Duran; Javier A Jo
Journal:  PLoS One       Date:  2021-03-18       Impact factor: 3.752

  6 in total

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