Literature DB >> 15250761

Fast model-free deconvolution of fluorescence decay for analysis of biological systems.

Javier A Jo1, Qiyin Fang, Thanassis Papaioannou, Laura Marcu.   

Abstract

For complex biological systems, conventional analysis of fluorescence intensity decay in terms of discrete exponential components cannot readily provide a true representation of the underlying fluorescence dynamics. We investigate an alternative nonparametric method for the analysis of time-resolved fluorescence data from biochemical and biological systems based on the expansion of fluorescence decay in a discrete Laguerre basis. We report that a unique Laguerre expansion can be found for fluorescence intensity decays of arbitrary form with convergence to a correct solution significantly faster than conventional multiexponential approximation methods. The Laguerre expansion coefficients are shown to be highly correlated with intrinsic fluorescence lifetimes and allow direct characterization of the fluorescence dynamics. A novel method for prediction of concentrations in mixtures of biochemical components using these coefficients is developed and successfully tested (prediction error <2%) using data from different mixtures of fluorescence lifetime standards. These findings suggest that the use of Laguerre expansion coefficients is a fast approach for the characterization and discrimination of complex biological systems such as tissues and cells, and that the method has potential for applications of fluorescence lifetime techniques to tissue diagnostics and imaging microscopy of living cells.

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Year:  2004        PMID: 15250761     DOI: 10.1117/1.1752919

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  36 in total

1.  Intraoperative delineation of primary brain tumors using time-resolved fluorescence spectroscopy.

Authors:  Pramod V Butte; Qiyin Fang; Javier A Jo; William H Yong; Brian K Pikul; Keith L Black; Laura Marcu
Journal:  J Biomed Opt       Date:  2010 Mar-Apr       Impact factor: 3.170

2.  Fluorescence lifetime imaging for the characterization of the biochemical composition of atherosclerotic plaques.

Authors:  Jennifer Phipps; Yinghua Sun; Ramez Saroufeem; Nisa Hatami; Michael C Fishbein; Laura Marcu
Journal:  J Biomed Opt       Date:  2011-09       Impact factor: 3.170

3.  Deconvolution of fluorescence lifetime imaging microscopy by a library of exponentials.

Authors:  Daniel U Campos-Delgado; O Gutierrez Navarro; E R Arce-Santana; Alex J Walsh; Melissa C Skala; Javier A Jo
Journal:  Opt Express       Date:  2015-09-07       Impact factor: 3.894

4.  Blind deconvolution estimation of fluorescence measurements through quadratic programming.

Authors:  Daniel U Campos-Delgado; Omar Gutierrez-Navarro; Edgar R Arce-Santana; Melissa C Skala; Alex J Walsh; Javier A Jo
Journal:  J Biomed Opt       Date:  2015-07       Impact factor: 3.170

Review 5.  Fluorescence lifetime techniques in medical applications.

Authors:  Laura Marcu
Journal:  Ann Biomed Eng       Date:  2012-01-25       Impact factor: 3.934

6.  A nonparametric method for analysis of fluorescence emission in combined time and wavelength dimensions.

Authors:  Olga V Ivanova; Laura Marcu; Michael C K Khoo
Journal:  Ann Biomed Eng       Date:  2005-04       Impact factor: 3.934

7.  Molecular fluorescence, phosphorescence, and chemiluminescence spectrometry.

Authors:  Kristin A Fletcher; Sayo O Fakayode; Mark Lowry; Sheryl A Tucker; Sharon L Neal; Irene W Kimaru; Matthew E McCarroll; Gabor Patonay; Philip B Oldham; Oleksandr Rusin; Robert M Strongin; Isiah M Warner
Journal:  Anal Chem       Date:  2006-06-15       Impact factor: 6.986

8.  Ultrafast Method for the Analysis of Fluorescence Lifetime Imaging Microscopy Data Based on the Laguerre Expansion Technique.

Authors:  Javier A Jo; Qiyin Fang; Laura Marcu
Journal:  IEEE J Quantum Electron       Date:  2005       Impact factor: 2.318

9.  Miniaturized side-viewing imaging probe for fluorescence lifetime imaging (FLIM): validation with fluorescence dyes, tissue structural proteins and tissue specimens.

Authors:  D S Elson; J A Jo; L Marcu
Journal:  New J Phys       Date:  2007       Impact factor: 3.729

10.  Fluorescence lifetime imaging microscopy for the characterization of atherosclerotic plaques.

Authors:  Jennifer Phipps; Yinghua Sun; Ramez Saroufeem; Nisa Hatami; Laura Marcu
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2009
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