Literature DB >> 19405759

Fully automated deconvolution method for on-line analysis of time-resolved fluorescence spectroscopy data based on an iterative Laguerre expansion technique.

Aditi S Dabir1, Chintan A Trivedi, Yeontack Ryu, Paritosh Pande, Javier A Jo.   

Abstract

Time-resolved fluorescence spectroscopy (TRFS) is a powerful analytical tool for quantifying the biochemical composition of organic and inorganic materials. The potential of TRFS for tissue diagnosis has been recently demonstrated. To facilitate the translation of TRFS to the clinical arena, algorithms for online TRFS data analysis are essential. A fast model-free TRFS deconvolution algorithm based on the Laguerre expansion method has previously been introduced. One limitation of this method, however, is the need to heuristically select two parameters that are crucial for the accurate estimation of the fluorescence decay: the Laguerre parameter alpha and the expansion order. Here, a new implementation of the Laguerre deconvolution method is introduced, in which a nonlinear least-square optimization of the Laguerre parameter alpha is performed, and the optimal expansion order is selected based on a minimum description length criterion (MDL). In addition, estimation of the zero-time delay between the recorded instrument response and fluorescence decay is also performed based on normalized mean square error criterion (NMSE). The method is validated on experimental data from fluorescence lifetime standards, endogenous tissue fluorophores, and human tissue. The proposed automated Laguerre deconvolution method will facilitate online applications of TRFS, such as real-time clinical tissue diagnosis.

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Year:  2009        PMID: 19405759     DOI: 10.1117/1.3103342

Source DB:  PubMed          Journal:  J Biomed Opt        ISSN: 1083-3668            Impact factor:   3.170


  9 in total

1.  Deconvolution of fluorescence lifetime imaging microscopy by a library of exponentials.

Authors:  Daniel U Campos-Delgado; O Gutierrez Navarro; E R Arce-Santana; Alex J Walsh; Melissa C Skala; Javier A Jo
Journal:  Opt Express       Date:  2015-09-07       Impact factor: 3.894

2.  Blind deconvolution estimation of fluorescence measurements through quadratic programming.

Authors:  Daniel U Campos-Delgado; Omar Gutierrez-Navarro; Edgar R Arce-Santana; Melissa C Skala; Alex J Walsh; Javier A Jo
Journal:  J Biomed Opt       Date:  2015-07       Impact factor: 3.170

3.  Extended output phasor representation of multi-spectral fluorescence lifetime imaging microscopy.

Authors:  Daniel U Campos-Delgado; O Gutiérrez Navarro; E R Arce-Santana; Javier A Jo
Journal:  Biomed Opt Express       Date:  2015-05-13       Impact factor: 3.732

4.  Design and evaluation of a device for fast multispectral time-resolved fluorescence spectroscopy and imaging.

Authors:  Diego R Yankelevich; Dinglong Ma; Jing Liu; Yang Sun; Yinghua Sun; Julien Bec; Daniel S Elson; Laura Marcu
Journal:  Rev Sci Instrum       Date:  2014-03       Impact factor: 1.523

5.  High-speed multispectral fluorescence lifetime imaging implementation for in vivo applications.

Authors:  Sebina Shrestha; Brian E Applegate; Jesung Park; Xudong Xiao; Paritosh Pande; Javier A Jo
Journal:  Opt Lett       Date:  2010-08-01       Impact factor: 3.776

6.  A novel method for fast and robust estimation of fluorescence decay dynamics using constrained least-squares deconvolution with Laguerre expansion.

Authors:  Jing Liu; Yang Sun; Jinyi Qi; Laura Marcu
Journal:  Phys Med Biol       Date:  2012-01-31       Impact factor: 3.609

7.  Multispectral fluorescence lifetime imaging device with a silicon avalanche photodetector.

Authors:  Xiangnan Zhou; Julien Bec; Diego Yankelevich; Laura Marcu
Journal:  Opt Express       Date:  2021-06-21       Impact factor: 3.833

8.  Robust Bayesian Fluorescence Lifetime Estimation, Decay Model Selection and Instrument Response Determination for Low-Intensity FLIM Imaging.

Authors:  Mark I Rowley; Anthonius C C Coolen; Borivoj Vojnovic; Paul R Barber
Journal:  PLoS One       Date:  2016-06-29       Impact factor: 3.240

9.  Blind deconvolution estimation by multi-exponential models and alternated least squares approximations: Free-form and sparse approach.

Authors:  Daniel U Campos-Delgado; Omar Gutierrez-Navarro; Ricardo Salinas-Martinez; Elvis Duran; Aldo R Mejia-Rodriguez; Miguel J Velazquez-Duran; Javier A Jo
Journal:  PLoS One       Date:  2021-03-18       Impact factor: 3.752

  9 in total

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