| Literature DB >> 26244404 |
Vithanage N Wijayathunga1, John P Ridgway, Eileen Ingham, Darren Treanor, Duane Carey, Andy Bulpitt, Derek Magee, Robin Damion, Ruth K Wilcox.
Abstract
STUDYEntities:
Mesh:
Year: 2015 PMID: 26244404 PMCID: PMC4684101 DOI: 10.1097/BRS.0000000000001075
Source DB: PubMed Journal: Spine (Phila Pa 1976) ISSN: 0362-2436 Impact factor: 3.468
Acquisition Parameters for the 9.4T Images
| Scan Parameter | Gradient Echo(FLASH) Sequence | Spin Echo (MSME) Sequence (Before Decalcification) | Spin Echo (MSME) Sequence (After Decalcification) |
| Repetition time TR (ms) | 18.9 | 1150 | 1150 |
| Echo time TE (ms) | 7.9 | 14 | 14 |
| Flip angle | 30 | 180 | 180 |
| Averages | 12 | 3 | 4 |
| Pixel bandwidth | 97.6562 | 192.3076923 | 192.3076923 |
| Echo train length | 1 | 1 | 1 |
| Width × height × depth (mm) | 30.0 × 30.0 × 30.0 | 29.0 × 29.64 × 29.0 | 29.0 × 29.7 × 29.0 |
| Acquisition matrix (rows × columns) | 512 × 512 | 260 × 256 | 260 × 256 |
| Slice thickness (mm) | 0.059 | 0.113 | 0.113 |
| Number of slices | 512 | 256 | 256 |
| Acquisition time | 16 h 31 min | 62 h 48 min | 83 h 44 min |
| Resolution (pixels per mm) | 17.067 | x- 8.828, y- 8.772 | x- 8.828, y- 8.754 |
| Voxel size (mm) | 0.059 × 0.059 × 0.059 | 0.113 × 0.114 × 0.113 | 0.113 × 0.114 × 0.113 |
Figure 1A selected MRI slice from the postdecalcification scan of the C7–T1 IVD and the corresponding histology micrograph. In both images the circles indicate comparative landmarks, vertical arrows indicate height measurements, and the line across the annulus is for lamellae counting.
Figure 3Greyscale variation plot along the corresponding line drawn across the annulus on the MR image for lamellae counting.
SNR Values Obtained for the Different MR Sequences Performed at Selected Conditions of the 2 Specimens
| Sample | Structure/Location | Mean SNR (±SD) |
| T2–T3(fresh) - GE (FLASH) sequence | Nucleus | 12.5 (±0.2) |
| Annulus | 12.7 (±0.4) | |
| Vertebral bone marrow | 9.0 (±0.5) | |
| C7–T1 (fresh) - SE (MSME) sequence | Nucleus | 117.7 (±2.2) |
| Annulus | 88.3 (±1.1) | |
| Vertebral bone marrow | 12.3 (±5.2) | |
| C7–T1 (postdecalcification) - SE (MSME) sequence | Nucleus | 235.9 (±2.2) |
| Annulus | 180.7 (±2.6) | |
| Vertebral bone marrow | 80.5 (±5.9) |
The signal and the noise parameter measurements were based on pixel grey values (intensity).
CNR Values Obtained for the Different MR Sequences Performed at Selected Conditions of the 2 Specimens. The Signal and the Noise Parameter Measurements Were Based on Pixel Grey Values (Intensity)
| Sample | Structure/Location | Mean CNR (±SD) |
| T2–T3 - GE (FLASH) sequence | Nucleus—bony endplate | Bony endplate was too narrow to select a region |
| Nucleus—annulus | −0.2 (±0.3) | |
| Nucleus—vertebral bone marrow | 3.4 (±0.6) | |
| C7–T1 (predecalcification) - SE (MSME) sequence | Nucleus—bony endplate | 105.6 (±2.3) |
| Nucleus—annulus | 29.4 (±3.0) | |
| Nucleus—vertebral bone marrow | 105.4 (±7.0) | |
| C7–T1 (postdecalcification) - SE (MSME) sequence | Nucleus—bony endplate | 212.9 (±1.2) |
| Nucleus—annulus | 55.1 (±2.8) | |
| Nucleus—vertebral bone marrow | 155.4 (±5.6) |
Relative Contrast Values Obtained for the Different MR Sequences Performed at Selected Conditions of the 2 Specimens. The Signal and the Noise Parameter Measurements Were Based on Pixel Grey Values (Intensity)
| Sample | Structure/Location | ReCon (±SD) |
| T2–T3 GE (FLASH) sequence | Nucleus—bony endplate | Bony endplate was too narrow to select a region |
| Nucleus—annulus | −0.5 (±1.1) | |
| Nucleus—vertebral bone marrow | 15.8 (±2.9) | |
| C7–T1 (predecalcification)—SE (MSME) sequence | Nucleus—bony endplate | 81.7 (±5.7) |
| Nucleus—annulus | 14.3 (±1.4) | |
| Nucleus—vertebral bone marrow | 81.3 (±7.3) | |
| C7–T1 (postdecalcification)—SE (MSME) sequence | Nucleus—bony endplate | 82.3 (±0.6) |
| Nucleus—annulus | 13.2 (±0.7) | |
| Nucleus—vertebral bone marrow | 49.7 (±2.7) |
Figure 4(A) Selected slice from the C7–T1 disc predecalcification, MSME sequence. (B) Selected slice from the C7–T1 disc post decalcification, MSME sequence (Supplemental Digital Content 1–10, available at: show additional images for the C7–T1 disc postdecalcification). (C, D) Selected slices from the T2–T3 disc, Flash sequence. (Supplemental Digital Content 11–20, available at: show additional images for the T2–T3 disc).
Figure 5GE (FLASH) image located at the anterior margins of the T2–T3 IVD, demonstrating fiber angle measurement.
Quantitative Comparison of Selected MRI Slices With Correspondingly Located Histology Micrographs (Values Rounded off to a Single Decimal Place)
| Proportional Distance From Disc Lateral Margin | Disc Height at the Midline (mm) | Bony Endplate Thickness at the Midline (mm) | Major Lamellae Section Counts | Matching Land Marks | |||
| MRI | Histo | MRI | Histo | MRI | Histo | ||
| 0.2 | 6.7 | 6.4 | 1.7 | 1.7 | 6 | 6 | Yes |
| 0.4 | 7.3 | 6.6 | 2.0 | 1.9 | 22 | 23 | Yes |
| 0.6 | 7.3 | 7.2 | 1.9 | 1.9 | 22 | 22 | Yes |
| 0.8 | 6.8 | 6.7 | 1.9 | 1.8 | 14 | 18 | Yes |
Figure 2Magnified image of the region in the histology micrograph in FIGURE 1, showing the line drawn across the annulus on the virtual slide for lamellae counting.