Literature DB >> 25955078

Cryo-electron microscopy and the amazing race to atomic resolution.

Elad Binshtein1, Melanie D Ohi1.   

Abstract

Cryo-electron microscopy (cryo-EM), the structural analysis of samples embedded in vitreous ice, is a powerful approach for determining three-dimensional (3D) structures of biological specimens. Over the past two decades, this technique has been used to successfully calculate subnanometer (<10 Å) resolution and, in some cases, near-atomic resolution structures of highly symmetrical and stable complexes such as icosahedral viruses and ribosomes, as well as samples that form ordered two-dimensional or helical arrays. However, determining high-resolution 3D structures of smaller, less symmetrical, and dynamic samples remains a significant challenge. The recent development of electron microscopes with automated data collection capabilities and robust direct electron detection cameras, as well as new powerful image processing algorithms, has dramatically expanded the number of biological macromolecules amenable for study using cryo-EM. In addition, these new technological and computational developments have been used to successfully determine <5 Å resolution 3D structures of samples, such as membrane proteins and complexes with either low or no symmetry, that traditionally were not considered promising candidates for high-resolution cryo-EM. With these exciting new advances, cryo-EM is now on pace to determine atomic resolution 3D structures.

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Year:  2015        PMID: 25955078     DOI: 10.1021/acs.biochem.5b00114

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  18 in total

Review 1.  Generalized single-particle cryo-EM--a historical perspective.

Authors:  Joachim Frank
Journal:  Microscopy (Oxf)       Date:  2015-11-12       Impact factor: 1.571

2.  A novel storage system for cryoEM samples.

Authors:  Giovanna Scapin; Winifred W Prosise; Michael K Wismer; Corey Strickland
Journal:  J Struct Biol       Date:  2017-04-19       Impact factor: 2.867

Review 3.  Diffraction Techniques in Structural Biology.

Authors:  Martin Egli
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2016-06-01

Review 4.  Current strategies for protein production and purification enabling membrane protein structural biology.

Authors:  Aditya Pandey; Kyungsoo Shin; Robin E Patterson; Xiang-Qin Liu; Jan K Rainey
Journal:  Biochem Cell Biol       Date:  2016-01-20       Impact factor: 3.626

Review 5.  While the revolution will not be crystallized, biochemistry reigns supreme.

Authors:  Yoshimasa Takizawa; Elad Binshtein; Amanda L Erwin; Tasia M Pyburn; Kathleen F Mittendorf; Melanie D Ohi
Journal:  Protein Sci       Date:  2016-10-06       Impact factor: 6.725

6.  Structural and functional analyses of the spliceosome requires a multi-disciplinary approach.

Authors:  Melanie D Ohi
Journal:  Methods       Date:  2017-08-01       Impact factor: 3.608

Review 7.  Biological Applications at the Cutting Edge of Cryo-Electron Microscopy.

Authors:  Rebecca S Dillard; Cheri M Hampton; Joshua D Strauss; Zunlong Ke; Deanna Altomara; Ricardo C Guerrero-Ferreira; Gabriella Kiss; Elizabeth R Wright
Journal:  Microsc Microanal       Date:  2018-08       Impact factor: 4.127

8.  Sequence-Based Prediction of RNA-Binding Residues in Proteins.

Authors:  Rasna R Walia; Yasser El-Manzalawy; Vasant G Honavar; Drena Dobbs
Journal:  Methods Mol Biol       Date:  2017

Review 9.  Finding the needle in the haystack: towards solving the protein-folding problem computationally.

Authors:  Bian Li; Michaela Fooksa; Sten Heinze; Jens Meiler
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-10-04       Impact factor: 8.250

10.  Refinement of organic crystal structures with multipolar electron scattering factors.

Authors:  Barbara Gruza; Michał Leszek Chodkiewicz; Joanna Krzeszczakowska; Paulina Maria Dominiak
Journal:  Acta Crystallogr A Found Adv       Date:  2020-01-01       Impact factor: 2.290

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