Literature DB >> 27248784

Diffraction Techniques in Structural Biology.

Martin Egli1.   

Abstract

A detailed understanding of chemical and biological function and the mechanisms underlying the molecular activities ultimately requires atomic-resolution structural data. Diffraction-based techniques such as single-crystal X-ray crystallography, electron microscopy, and neutron diffraction are well established and they have paved the road to the stunning successes of modern-day structural biology. The major advances achieved in the last twenty years in all aspects of structural research, including sample preparation, crystallization, the construction of synchrotron and spallation sources, phasing approaches, and high-speed computing and visualization, now provide specialists and nonspecialists alike with a steady flow of molecular images of unprecedented detail. The present unit combines a general overview of diffraction methods with a detailed description of the process of a single-crystal X-ray structure determination experiment, from chemical synthesis or expression to phasing and refinement, analysis, and quality control. For novices it may serve as a stepping-stone to more in-depth treatises of the individual topics. Readers relying on structural information for interpreting functional data may find it a useful consumer guide. © 2016 by John Wiley & Sons, Inc.
Copyright © 2016 John Wiley & Sons, Inc.

Entities:  

Keywords:  X-ray crystallography; crystallization; diffraction; electron microscopy; neutron scattering; structural biology

Mesh:

Year:  2016        PMID: 27248784      PMCID: PMC4905557          DOI: 10.1002/cpnc.4

Source DB:  PubMed          Journal:  Curr Protoc Nucleic Acid Chem        ISSN: 1934-9270


  99 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

Review 2.  Synchrotron crystallography.

Authors:  W A Hendrickson
Journal:  Trends Biochem Sci       Date:  2000-12       Impact factor: 13.807

Review 3.  Macromolecular electron microscopy in the era of structural genomics.

Authors:  W Baumeister; A C Steven
Journal:  Trends Biochem Sci       Date:  2000-12       Impact factor: 13.807

Review 4.  Automation of X-ray crystallography.

Authors:  E Abola; P Kuhn; T Earnest; R C Stevens
Journal:  Nat Struct Biol       Date:  2000-11

Review 5.  Single-molecule X-ray diffraction.

Authors:  J Hajdu
Journal:  Curr Opin Struct Biol       Date:  2000-10       Impact factor: 6.809

6.  A highly efficient 24-condition matrix for the crystallization of nucleic acid fragments.

Authors:  I Berger; C H Kang; N Sinha; M Wolters; A Rich
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1996-05-01

7.  Macromolecular structure determination by cryo-electron microscopy.

Authors:  H R Saibil
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-10

8.  Detection of alkali metal ions in DNA crystals using state-of-the-art X-ray diffraction experiments.

Authors:  V Tereshko; C J Wilds; G Minasov; T P Prakash; M A Maier; A Howard; Z Wawrzak; M Manoharan; M Egli
Journal:  Nucleic Acids Res       Date:  2001-03-01       Impact factor: 16.971

9.  Automated MAD and MIR structure solution.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

Review 10.  Fluorescence resonance energy transfer as a structural tool for nucleic acids.

Authors:  D M Lilley; T J Wilson
Journal:  Curr Opin Chem Biol       Date:  2000-10       Impact factor: 8.822

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  2 in total

Review 1.  Two-dimensional Infrared Spectroscopy Reveals Better Insights of Structure and Dynamics of Protein.

Authors:  Kiran Sankar Maiti
Journal:  Molecules       Date:  2021-11-16       Impact factor: 4.411

2.  Polysaccharide-Based Injection Matrix for Serial Crystallography.

Authors:  Ki Hyun Nam
Journal:  Int J Mol Sci       Date:  2020-05-08       Impact factor: 5.923

  2 in total

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