Literature DB >> 25849246

Regulation of transcriptionally active genes via the catalytically inactive Cas9 in C. elegans and D. rerio.

Lijiang Long1, Hong Guo1, Di Yao1, Kai Xiong1, Yongjun Li1, Pengpeng Liu1, Zuoyan Zhu1, Dong Liu1.   

Abstract

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Year:  2015        PMID： 25849246      PMCID： PMC4423076          DOI： 10.1038/cr.2015.35

Source DB:  PubMed          Journal:  Cell Res        ISSN： 1001-0602            Impact factor:   25.617


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  15 in total

1.  Zebrafish fgf3 and fgf8 encode redundant functions required for otic placode induction.

Authors:  B T Phillips; K Bolding; B B Riley
Journal:  Dev Biol       Date:  2001-07-15       Impact factor: 3.582

2.  Out with the old, in with the new: reassessing morpholino knockdowns in light of genome editing technology.

Authors:  Stefan Schulte-Merker; Didier Y R Stainier
Journal:  Development       Date:  2014-08       Impact factor: 6.868

3.  Genetic screens in human cells using the CRISPR-Cas9 system.

Authors:  Tim Wang; Jenny J Wei; David M Sabatini; Eric S Lander
Journal:  Science       Date:  2013-12-12       Impact factor: 47.728

Review 4.  Cas9 as a versatile tool for engineering biology.

Authors:  Prashant Mali; Kevin M Esvelt; George M Church
Journal:  Nat Methods       Date:  2013-10       Impact factor: 28.547

5.  Repurposing CRISPR as an RNA-guided platform for sequence-specific control of gene expression.

Authors:  Lei S Qi; Matthew H Larson; Luke A Gilbert; Jennifer A Doudna; Jonathan S Weissman; Adam P Arkin; Wendell A Lim
Journal:  Cell       Date:  2013-02-28       Impact factor: 41.582

6.  CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotes.

Authors:  Luke A Gilbert; Matthew H Larson; Leonardo Morsut; Zairan Liu; Gloria A Brar; Sandra E Torres; Noam Stern-Ginossar; Onn Brandman; Evan H Whitehead; Jennifer A Doudna; Wendell A Lim; Jonathan S Weissman; Lei S Qi
Journal:  Cell       Date:  2013-07-11       Impact factor: 41.582

7.  Genome-wide recessive genetic screening in mammalian cells with a lentiviral CRISPR-guide RNA library.

Authors:  Hiroko Koike-Yusa; Yilong Li; E-Pien Tan; Martin Del Castillo Velasco-Herrera; Kosuke Yusa
Journal:  Nat Biotechnol       Date:  2013-12-23       Impact factor: 54.908

8.  Programmable repression and activation of bacterial gene expression using an engineered CRISPR-Cas system.

Authors:  David Bikard; Wenyan Jiang; Poulami Samai; Ann Hochschild; Feng Zhang; Luciano A Marraffini
Journal:  Nucleic Acids Res       Date:  2013-06-12       Impact factor: 16.971

9.  Multiplexed activation of endogenous genes by CRISPR-on, an RNA-guided transcriptional activator system.

Authors:  Albert W Cheng; Haoyi Wang; Hui Yang; Linyu Shi; Yarden Katz; Thorold W Theunissen; Sudharshan Rangarajan; Chikdu S Shivalila; Daniel B Dadon; Rudolf Jaenisch
Journal:  Cell Res       Date:  2013-08-27       Impact factor: 25.617

10.  RNA-guided gene activation by CRISPR-Cas9-based transcription factors.

Authors:  Pablo Perez-Pinera; D Dewran Kocak; Christopher M Vockley; Andrew F Adler; Ami M Kabadi; Lauren R Polstein; Pratiksha I Thakore; Katherine A Glass; David G Ousterout; Kam W Leong; Farshid Guilak; Gregory E Crawford; Timothy E Reddy; Charles A Gersbach
Journal:  Nat Methods       Date:  2013-07-25       Impact factor: 28.547
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  26 in total

1.  Cas9 Variants Expand the Target Repertoire in Caenorhabditis elegans.

Authors:  Ryan T Bell; Becky X H Fu; Andrew Z Fire
Journal:  Genetics       Date:  2015-12-17       Impact factor: 4.562

2.  Reduced apoptosis in Chinese hamster ovary cells via optimized CRISPR interference.

Authors:  Kai Xiong; Kim Fabiano Marquart; Karen Julie la Cour Karottki; Shangzhong Li; Isaac Shamie; Jae Seong Lee; Signe Gerling; Nan Cher Yeo; Alejandro Chavez; Gyun Min Lee; Nathan E Lewis; Helene Faustrup Kildegaard
Journal:  Biotechnol Bioeng       Date:  2019-04-02       Impact factor: 4.530

Review 3.  The big bang of genome editing technology: development and application of the CRISPR/Cas9 system in disease animal models.

Authors:  Ming Shao; Tian-Rui Xu; Ce-Shi Chen
Journal:  Dongwuxue Yanjiu       Date:  2016-07-18

4.  Zebrafish Znfl1 proteins control the expression of hoxb1b gene in the posterior neuroectoderm by acting upstream of pou5f3 and sall4 genes.

Authors:  Xiaohua Dong; Jingyun Li; Luqingqing He; Chun Gu; Wenshuang Jia; Yunyun Yue; Jun Li; Qinxin Zhang; Lele Chu; Qingshun Zhao
Journal:  J Biol Chem       Date:  2017-06-16       Impact factor: 5.157

Review 5.  Advancements in zebrafish applications for 21st century toxicology.

Authors:  Gloria R Garcia; Pamela D Noyes; Robert L Tanguay
Journal:  Pharmacol Ther       Date:  2016-03-22       Impact factor: 12.310

Review 6.  The Caenorhabditis elegans Transgenic Toolbox.

Authors:  Jeremy Nance; Christian Frøkjær-Jensen
Journal:  Genetics       Date:  2019-08       Impact factor: 4.562

Review 7.  LITTLE FISH, BIG DATA: ZEBRAFISH AS A MODEL FOR CARDIOVASCULAR AND METABOLIC DISEASE.

Authors:  Philipp Gut; Sven Reischauer; Didier Y R Stainier; Rima Arnaout
Journal:  Physiol Rev       Date:  2017-07-01       Impact factor: 37.312

8.  Simultaneous quantification of mRNA and protein in single cells reveals post-transcriptional effects of genetic variation.

Authors:  Christian Brion; Sheila M Lutz; Frank Wolfgang Albert
Journal:  Elife       Date:  2020-11-16       Impact factor: 8.140

9.  Erroneous ribosomal RNAs promote the generation of antisense ribosomal siRNA.

Authors:  Chengming Zhu; Qi Yan; Chenchun Weng; Xinhao Hou; Hui Mao; Dun Liu; Xuezhu Feng; Shouhong Guang
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-17       Impact factor: 11.205

10.  Genome and epigenome engineering CRISPR toolkit for in vivo modulation of cis-regulatory interactions and gene expression in the chicken embryo.

Authors:  Ruth M Williams; Upeka Senanayake; Mara Artibani; Gunes Taylor; Daniel Wells; Ahmed Ashour Ahmed; Tatjana Sauka-Spengler
Journal:  Development       Date:  2018-02-23       Impact factor: 6.868
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