Literature DB >> 28468832

LITTLE FISH, BIG DATA: ZEBRAFISH AS A MODEL FOR CARDIOVASCULAR AND METABOLIC DISEASE.

Philipp Gut1, Sven Reischauer1, Didier Y R Stainier1, Rima Arnaout1.   

Abstract

The burden of cardiovascular and metabolic diseases worldwide is staggering. The emergence of systems approaches in biology promises new therapies, faster and cheaper diagnostics, and personalized medicine. However, a profound understanding of pathogenic mechanisms at the cellular and molecular levels remains a fundamental requirement for discovery and therapeutics. Animal models of human disease are cornerstones of drug discovery as they allow identification of novel pharmacological targets by linking gene function with pathogenesis. The zebrafish model has been used for decades to study development and pathophysiology. More than ever, the specific strengths of the zebrafish model make it a prime partner in an age of discovery transformed by big-data approaches to genomics and disease. Zebrafish share a largely conserved physiology and anatomy with mammals. They allow a wide range of genetic manipulations, including the latest genome engineering approaches. They can be bred and studied with remarkable speed, enabling a range of large-scale phenotypic screens. Finally, zebrafish demonstrate an impressive regenerative capacity scientists hope to unlock in humans. Here, we provide a comprehensive guide on applications of zebrafish to investigate cardiovascular and metabolic diseases. We delineate advantages and limitations of zebrafish models of human disease and summarize their most significant contributions to understanding disease progression to date.
Copyright © 2017 the American Physiological Society.

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Year:  2017        PMID: 28468832      PMCID: PMC5817164          DOI: 10.1152/physrev.00038.2016

Source DB:  PubMed          Journal:  Physiol Rev        ISSN: 0031-9333            Impact factor:   37.312


  441 in total

1.  Fish genomes flying. Symposium on Medaka Genomics.

Authors:  Akihiro Shima; Heinz Himmelbauer; Hiroshi Mitani; Makoto Furutani-Seiki; Joachim Wittbrodt; Manfred Schartl
Journal:  EMBO Rep       Date:  2003-02       Impact factor: 8.807

2.  Simple and efficient transgenesis with meganuclease constructs in zebrafish.

Authors:  Daniele Soroldoni; Benjamin M Hogan; Andrew C Oates
Journal:  Methods Mol Biol       Date:  2009

Review 3.  The role of fructose in the pathogenesis of NAFLD and the metabolic syndrome.

Authors:  Jung Sub Lim; Michele Mietus-Snyder; Annie Valente; Jean-Marc Schwarz; Robert H Lustig
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2010-04-06       Impact factor: 46.802

4.  Prostaglandin-modulated umbilical cord blood hematopoietic stem cell transplantation.

Authors:  Corey Cutler; Pratik Multani; David Robbins; Haesook T Kim; Thuy Le; Jonathan Hoggatt; Louis M Pelus; Caroline Desponts; Yi-Bin Chen; Betsy Rezner; Philippe Armand; John Koreth; Brett Glotzbecker; Vincent T Ho; Edwin Alyea; Marlisa Isom; Grace Kao; Myriam Armant; Leslie Silberstein; Peirong Hu; Robert J Soiffer; David T Scadden; Jerome Ritz; Wolfram Goessling; Trista E North; John Mendlein; Karen Ballen; Leonard I Zon; Joseph H Antin; Daniel D Shoemaker
Journal:  Blood       Date:  2013-08-30       Impact factor: 22.113

5.  Mutation mapping and identification by whole-genome sequencing.

Authors:  Ignaty Leshchiner; Kristen Alexa; Peter Kelsey; Ivan Adzhubei; Christina A Austin-Tse; Jeffrey D Cooney; Heidi Anderson; Matthew J King; Rolf W Stottmann; Maija K Garnaas; Seungshin Ha; Iain A Drummond; Barry H Paw; Trista E North; David R Beier; Wolfram Goessling; Shamil R Sunyaev
Journal:  Genome Res       Date:  2012-05-03       Impact factor: 9.043

6.  Nanog, Pou5f1 and SoxB1 activate zygotic gene expression during the maternal-to-zygotic transition.

Authors:  Miler T Lee; Ashley R Bonneau; Carter M Takacs; Ariel A Bazzini; Kate R DiVito; Elizabeth S Fleming; Antonio J Giraldez
Journal:  Nature       Date:  2013-09-22       Impact factor: 49.962

7.  Regeneration of the pancreas in adult zebrafish.

Authors:  Jennifer B Moss; Punita Koustubhan; Melanie Greenman; Michael J Parsons; Ingrid Walter; Larry G Moss
Journal:  Diabetes       Date:  2009-06-02       Impact factor: 9.461

8.  Years lived with disability (YLDs) for 1160 sequelae of 289 diseases and injuries 1990-2010: a systematic analysis for the Global Burden of Disease Study 2010.

Authors:  Theo Vos; Abraham D Flaxman; Mohsen Naghavi; Rafael Lozano; Catherine Michaud; Majid Ezzati; Kenji Shibuya; Joshua A Salomon; Safa Abdalla; Victor Aboyans; Jerry Abraham; Ilana Ackerman; Rakesh Aggarwal; Stephanie Y Ahn; Mohammed K Ali; Miriam Alvarado; H Ross Anderson; Laurie M Anderson; Kathryn G Andrews; Charles Atkinson; Larry M Baddour; Adil N Bahalim; Suzanne Barker-Collo; Lope H Barrero; David H Bartels; Maria-Gloria Basáñez; Amanda Baxter; Michelle L Bell; Emelia J Benjamin; Derrick Bennett; Eduardo Bernabé; Kavi Bhalla; Bishal Bhandari; Boris Bikbov; Aref Bin Abdulhak; Gretchen Birbeck; James A Black; Hannah Blencowe; Jed D Blore; Fiona Blyth; Ian Bolliger; Audrey Bonaventure; Soufiane Boufous; Rupert Bourne; Michel Boussinesq; Tasanee Braithwaite; Carol Brayne; Lisa Bridgett; Simon Brooker; Peter Brooks; Traolach S Brugha; Claire Bryan-Hancock; Chiara Bucello; Rachelle Buchbinder; Geoffrey Buckle; Christine M Budke; Michael Burch; Peter Burney; Roy Burstein; Bianca Calabria; Benjamin Campbell; Charles E Canter; Hélène Carabin; Jonathan Carapetis; Loreto Carmona; Claudia Cella; Fiona Charlson; Honglei Chen; Andrew Tai-Ann Cheng; David Chou; Sumeet S Chugh; Luc E Coffeng; Steven D Colan; Samantha Colquhoun; K Ellicott Colson; John Condon; Myles D Connor; Leslie T Cooper; Matthew Corriere; Monica Cortinovis; Karen Courville de Vaccaro; William Couser; Benjamin C Cowie; Michael H Criqui; Marita Cross; Kaustubh C Dabhadkar; Manu Dahiya; Nabila Dahodwala; James Damsere-Derry; Goodarz Danaei; Adrian Davis; Diego De Leo; Louisa Degenhardt; Robert Dellavalle; Allyne Delossantos; Julie Denenberg; Sarah Derrett; Don C Des Jarlais; Samath D Dharmaratne; Mukesh Dherani; Cesar Diaz-Torne; Helen Dolk; E Ray Dorsey; Tim Driscoll; Herbert Duber; Beth Ebel; Karen Edmond; Alexis Elbaz; Suad Eltahir Ali; Holly Erskine; Patricia J Erwin; Patricia Espindola; Stalin E Ewoigbokhan; Farshad Farzadfar; Valery Feigin; David T Felson; Alize Ferrari; Cleusa P Ferri; Eric M Fèvre; Mariel M Finucane; Seth Flaxman; Louise Flood; Kyle Foreman; Mohammad H Forouzanfar; Francis Gerry R Fowkes; Richard Franklin; Marlene Fransen; Michael K Freeman; Belinda J Gabbe; Sherine E Gabriel; Emmanuela Gakidou; Hammad A Ganatra; Bianca Garcia; Flavio Gaspari; Richard F Gillum; Gerhard Gmel; Richard Gosselin; Rebecca Grainger; Justina Groeger; Francis Guillemin; David Gunnell; Ramyani Gupta; Juanita Haagsma; Holly Hagan; Yara A Halasa; Wayne Hall; Diana Haring; Josep Maria Haro; James E Harrison; Rasmus Havmoeller; Roderick J Hay; Hideki Higashi; Catherine Hill; Bruno Hoen; Howard Hoffman; Peter J Hotez; Damian Hoy; John J Huang; Sydney E Ibeanusi; Kathryn H Jacobsen; Spencer L James; Deborah Jarvis; Rashmi Jasrasaria; Sudha Jayaraman; Nicole Johns; Jost B Jonas; Ganesan Karthikeyan; Nicholas Kassebaum; Norito Kawakami; Andre Keren; Jon-Paul Khoo; Charles H King; Lisa Marie Knowlton; Olive Kobusingye; Adofo Koranteng; Rita Krishnamurthi; Ratilal Lalloo; Laura L Laslett; Tim Lathlean; Janet L Leasher; Yong Yi Lee; James Leigh; Stephen S Lim; Elizabeth Limb; John Kent Lin; Michael Lipnick; Steven E Lipshultz; Wei Liu; Maria Loane; Summer Lockett Ohno; Ronan Lyons; Jixiang Ma; Jacqueline Mabweijano; Michael F MacIntyre; Reza Malekzadeh; Leslie Mallinger; Sivabalan Manivannan; Wagner Marcenes; Lyn March; David J Margolis; Guy B Marks; Robin Marks; Akira Matsumori; Richard Matzopoulos; Bongani M Mayosi; John H McAnulty; Mary M McDermott; Neil McGill; John McGrath; Maria Elena Medina-Mora; Michele Meltzer; George A Mensah; Tony R Merriman; Ana-Claire Meyer; Valeria Miglioli; Matthew Miller; Ted R Miller; Philip B Mitchell; Ana Olga Mocumbi; Terrie E Moffitt; Ali A Mokdad; Lorenzo Monasta; Marcella Montico; Maziar Moradi-Lakeh; Andrew Moran; Lidia Morawska; Rintaro Mori; Michele E Murdoch; Michael K Mwaniki; Kovin Naidoo; M Nathan Nair; Luigi Naldi; K M Venkat Narayan; Paul K Nelson; Robert G Nelson; Michael C Nevitt; Charles R Newton; Sandra Nolte; Paul Norman; Rosana Norman; Martin O'Donnell; Simon O'Hanlon; Casey Olives; Saad B Omer; Katrina Ortblad; Richard Osborne; Doruk Ozgediz; Andrew Page; Bishnu Pahari; Jeyaraj Durai Pandian; Andrea Panozo Rivero; Scott B Patten; Neil Pearce; Rogelio Perez Padilla; Fernando Perez-Ruiz; Norberto Perico; Konrad Pesudovs; David Phillips; Michael R Phillips; Kelsey Pierce; Sébastien Pion; Guilherme V Polanczyk; Suzanne Polinder; C Arden Pope; Svetlana Popova; Esteban Porrini; Farshad Pourmalek; Martin Prince; Rachel L Pullan; Kapa D Ramaiah; Dharani Ranganathan; Homie Razavi; Mathilda Regan; Jürgen T Rehm; David B Rein; Guiseppe Remuzzi; Kathryn Richardson; Frederick P Rivara; Thomas Roberts; Carolyn Robinson; Felipe Rodriguez De Leòn; Luca Ronfani; Robin Room; Lisa C Rosenfeld; Lesley Rushton; Ralph L Sacco; Sukanta Saha; Uchechukwu Sampson; Lidia Sanchez-Riera; Ella Sanman; David C Schwebel; James Graham Scott; Maria Segui-Gomez; Saeid Shahraz; Donald S Shepard; Hwashin Shin; Rupak Shivakoti; David Singh; Gitanjali M Singh; Jasvinder A Singh; Jessica Singleton; David A Sleet; Karen Sliwa; Emma Smith; Jennifer L Smith; Nicolas J C Stapelberg; Andrew Steer; Timothy Steiner; Wilma A Stolk; Lars Jacob Stovner; Christopher Sudfeld; Sana Syed; Giorgio Tamburlini; Mohammad Tavakkoli; Hugh R Taylor; Jennifer A Taylor; William J Taylor; Bernadette Thomas; W Murray Thomson; George D Thurston; Imad M Tleyjeh; Marcello Tonelli; Jeffrey A Towbin; Thomas Truelsen; Miltiadis K Tsilimbaris; Clotilde Ubeda; Eduardo A Undurraga; Marieke J van der Werf; Jim van Os; Monica S Vavilala; N Venketasubramanian; Mengru Wang; Wenzhi Wang; Kerrianne Watt; David J Weatherall; Martin A Weinstock; Robert Weintraub; Marc G Weisskopf; Myrna M Weissman; Richard A White; Harvey Whiteford; Steven T Wiersma; James D Wilkinson; Hywel C Williams; Sean R M Williams; Emma Witt; Frederick Wolfe; Anthony D Woolf; Sarah Wulf; Pon-Hsiu Yeh; Anita K M Zaidi; Zhi-Jie Zheng; David Zonies; Alan D Lopez; Christopher J L Murray; Mohammad A AlMazroa; Ziad A Memish
Journal:  Lancet       Date:  2012-12-15       Impact factor: 79.321

9.  Cloche, an early acting zebrafish gene, is required by both the endothelial and hematopoietic lineages.

Authors:  D Y Stainier; B M Weinstein; H W Detrich; L I Zon; M C Fishman
Journal:  Development       Date:  1995-10       Impact factor: 6.868

10.  A simple strategy for heritable chromosomal deletions in zebrafish via the combinatorial action of targeting nucleases.

Authors:  Shimin Lim; Yin Wang; Xueyao Yu; Yian Huang; Mark S Featherstone; Karuna Sampath
Journal:  Genome Biol       Date:  2013-07-01       Impact factor: 13.583

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  75 in total

1.  Early sarcomere and metabolic defects in a zebrafish pitx2c cardiac arrhythmia model.

Authors:  Michelle M Collins; Gustav Ahlberg; Camilla Vestergaard Hansen; Stefan Guenther; Rubén Marín-Juez; Anna M Sokol; Hadil El-Sammak; Janett Piesker; Ylva Hellsten; Morten S Olesen; Didier Y R Stainier; Pia R Lundegaard
Journal:  Proc Natl Acad Sci U S A       Date:  2019-11-08       Impact factor: 11.205

2.  Studying Diabetes Through the Eyes of a Fish: Microdissection, Visualization, and Analysis of the Adult tg(fli:EGFP) Zebrafish Retinal Vasculature.

Authors:  Lucas Moritz Wiggenhauser; Katharina Kohl; Nadine Dietrich; Hans-Peter Hammes; Jens Kroll
Journal:  J Vis Exp       Date:  2017-12-26       Impact factor: 1.355

3.  A whole organism small molecule screen identifies novel regulators of pancreatic endocrine development.

Authors:  Christian S M Helker; Sri-Teja Mullapudi; Laura M Mueller; Jens Preussner; Sorin Tunaru; Oskar Skog; Hyouk-Bum Kwon; Florian Kreuder; Joseph J Lancman; Remy Bonnavion; P Duc Si Dong; Mario Looso; Stefan Offermanns; Ole Korsgren; Francesca M Spagnoli; Didier Y R Stainier
Journal:  Development       Date:  2019-07-24       Impact factor: 6.868

4.  Genetic deletion of gpr27 alters acylcarnitine metabolism, insulin sensitivity, and glucose homeostasis in zebrafish.

Authors:  Anjali K Nath; Junyan Ma; Zsu-Zsu Chen; Zhuyun Li; Maria Del Carmen Vitery; Michelle L Kelley; Randall T Peterson; Robert E Gerszten; Jing-Ruey J Yeh
Journal:  FASEB J       Date:  2019-12-02       Impact factor: 5.191

5.  MondoA regulates gene expression in cholesterol biosynthesis-associated pathways required for zebrafish epiboly.

Authors:  Meltem Weger; Benjamin D Weger; Andrea Schink; Masanari Takamiya; Johannes Stegmaier; Cédric Gobet; Alice Parisi; Andrei Yu Kobitski; Jonas Mertes; Nils Krone; Uwe Strähle; Gerd Ulrich Nienhaus; Ralf Mikut; Frédéric Gachon; Philipp Gut; Thomas Dickmeis
Journal:  Elife       Date:  2020-09-24       Impact factor: 8.140

6.  Collective Behavior in Wild Zebrafish.

Authors:  Delia S Shelton; Sierra G Shelton; Danita K Daniel; Manickam Raja; Anuradha Bhat; Robyn L Tanguay; Dennis M Higgs; Emília P Martins
Journal:  Zebrafish       Date:  2020-06-09       Impact factor: 1.985

7.  Influence of Commercial and Laboratory Diets on Growth, Body Composition, and Reproduction in the Zebrafish Danio rerio.

Authors:  L Adele Fowler; Michael B Williams; Lacey N Dennis-Cornelius; Susan Farmer; R Jeff Barry; Mickie L Powell; Stephen A Watts
Journal:  Zebrafish       Date:  2019-08-05       Impact factor: 1.985

8.  Lipid Alterations during Zebrafish Embryogenesis Revealed by Dynamic Mass Spectrometry Profiling with C=C Specificity.

Authors:  Xu Zhao; Jing Chen; Weiying Zhang; Chengdui Yang; Xiaoxiao Ma; Sichun Zhang; Xinrong Zhang
Journal:  J Am Soc Mass Spectrom       Date:  2019-10-18       Impact factor: 3.109

Review 9.  A Roadmap to Heart Regeneration Through Conserved Mechanisms in Zebrafish and Mammals.

Authors:  Kyla D Brezitski; Alexander W Goff; Paige DeBenedittis; Ravi Karra
Journal:  Curr Cardiol Rep       Date:  2021-03-02       Impact factor: 2.931

10.  Cerebrovascular endothelial cells form transient Notch-dependent cystic structures in zebrafish.

Authors:  Elisabeth C Kugler; Max van Lessen; Stephan Daetwyler; Karishma Chhabria; Aaron M Savage; Vishmi Silva; Karen Plant; Ryan B MacDonald; Jan Huisken; Robert N Wilkinson; Stefan Schulte-Merker; Paul Armitage; Timothy Ja Chico
Journal:  EMBO Rep       Date:  2019-06-18       Impact factor: 8.807

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